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Target ID: 424993
Target Name:C.KN20875A  Protein Accession:NP_906188.1  Local Accession: C.KN20875A  cDNA Accession:REF|NC_002950.2|:2237837-2239003  PSCA PDB:4q98

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Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
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Name: Fimbrilin, Major fimbrial subunit (PF06321), Major fimbrial subunit protein type IV, C-terminal (PF15495)  Start Position: 21  End Position: 388
GNF Target Alias: PB1:SpeedET-C.KN20875A-pgi-388-21-388  Sequence Type: SEGMENT  Residues: 368
DNA Length: 1104  Molecular Weight: 39089.60  Isoelectric Point: 4.97
Epsilon 280: 42290  Gravy Index: -0.21  Species: P. gingivalis W83
Activated: 0  Alanine Absolute: 39  Alanine Relative: 0.1060
Arginine Absolute: 5  Arginine Relative: 0.0136  Asparagine Absolute: 32
Asparagine Relative: 0.0870  Aspartic Acid Absolute: 16  Aspartic Acid Relative: 0.0435
Cysteine Absolute: 4  Cysteine Relative: 0.0109  Glutamic Acid Absolute: 20
Glutamic Acid Relative: 0.0543  Glutamine Absolute: 12  Glutamine Relative: 0.0326
Glycine Absolute: 34  Glycine Relative: 0.0924  Histidine Absolute: 4
Histidine Relative: 0.0109  Isoleucine Absolute: 18  Isoleucine Relative: 0.0489
Leucine Absolute: 27  Leucine Relative: 0.0734  Lysine Absolute: 21
Lysine Relative: 0.0571  Methionine Absolute: 3  Methionine Relative: 0.0082
Phenylalanine Absolute: 7  Phenylalanine Relative: 0.0190  Proline Absolute: 17
Proline Relative: 0.0462  Serine Absolute: 20  Serine Relative: 0.0543
Threonine Absolute: 33  Threonine Relative: 0.0897  Tryptophan Absolute: 2
Tryptophan Relative: 0.0054  Tyrosine Absolute: 21  Tyrosine Relative: 0.0571
Valine Absolute: 33  Valine Relative: 0.0897  Project: Structural studies of P. gingivalis fimbriae and related proteins
Selection Date: 2012-09-05  PFAM: submit  
ProposalRelationshipOwnerLab Name
121Collaborator CNT# 164NakayamaDr. Koji Nakayama

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
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