LOADING...
Target ID: 417815
Target Name:SP9087B  Protein Accession:ZP_02071508.1  Local Accession: SP9087B  cDNA Accession:REF|NZ_DS362246.1|:270191-270979  PSCA PDB:4q5kPDB:4q68PDB:4h4j

Hover over nodes to see experimental data. Click on nodes to go to that point in the data below.

Proposed Target  
 
Active Target  
 
PCR Testing  
 
Amplifer Generation  
 
Orientation  
 
Plasmid Purification  
 
Micro Expression  
 
Expression  
 
Protein Purification  
 
Crystallization  
 
Crystal Hit  
 
SDC Receiving  
 
Screening  
 
Data Collection  
 
Integration  
 
Scaling  
 
Truncating  
 
Phasing  
 
Density Modification  
 
Tracing  
 
MR Tracing  
 
Refining  
 
QC  
 
Validation  
 
PDB Deposition  
 
Proposed Target
 
Active Target
 
PCR Testing
 
Amplifer Generation
 
Orientation
 
Plasmid Purification
 
Micro Expression
 
Expression
 
Protein Purification
 
Crystallization
 
Crystal Hit
 
SDC Receiving
 
Screening
 
Data Collection
 
Integration
 
Scaling
 
Truncating
 
Phasing
 
Density Modification
 
Tracing
 
MR Tracing
 
Refining
 
QC
 
Validation
 
PDB Deposition
 
 
Status View
 
Chrono View
 
31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55
2 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46
1 2 3 43 44 45 46
1 2 3 5 6 7 8 1 2 1 2 3 4 6 7 8 9 10 1 2 3 5 6 7 8 1 2 3 4 6 7 8 9
1 2 3 5 6 7 8 1 2 3 4 6 7 8 9
1 2 3 5 6 7 8 1 2 4 5 1 2 3 4 6 7 8 9
1 2 4 5
1 2 3 5 6 7 8 1 2 4 5 1 2 3 4 6 7 8 9
1 2 3 5 6 7 8 1 2 4 5 1 2 3 4 6 7 8 9
1 2 3 5 6 7 8 1 2 4 5 1 2 3 4 6 7 8 9
1 2 3 5 6 7 8 1 2 4 5 1 2 3 4 6 7 8 9
1 1 2 4 5
1 2 4 5
4 5
2 1 1 1 1
Name: N-acetylmuramoyl-L-alanine amidase, NlpC/P60 Amidase family (former DUF1460)  Start Position: 24  End Position: 262
GNF Target Alias: PB1:SpeedET-SP9087B-bun-262-24-262  Sequence Type: SEGMENT  Residues: 239
DNA Length: 717  Molecular Weight: 26477.87  Isoelectric Point: 6.09
Epsilon 280: 31400  Gravy Index: -0.33  Species: Bacteroides uniformis
Activated: 1  Alanine Absolute: 17  Alanine Relative: 0.0711
Arginine Absolute: 7  Arginine Relative: 0.0293  Asparagine Absolute: 12
Asparagine Relative: 0.0502  Aspartic Acid Absolute: 20  Aspartic Acid Relative: 0.0837
Cysteine Absolute: 2  Cysteine Relative: 0.0084  Glutamic Acid Absolute: 11
Glutamic Acid Relative: 0.0460  Glutamine Absolute: 7  Glutamine Relative: 0.0293
Glycine Absolute: 16  Glycine Relative: 0.0669  Histidine Absolute: 6
Histidine Relative: 0.0251  Isoleucine Absolute: 15  Isoleucine Relative: 0.0628
Leucine Absolute: 25  Leucine Relative: 0.1046  Lysine Absolute: 21
Lysine Relative: 0.0879  Methionine Absolute: 7  Methionine Relative: 0.0293
Phenylalanine Absolute: 3  Phenylalanine Relative: 0.0126  Proline Absolute: 11
Proline Relative: 0.0460  Serine Absolute: 16  Serine Relative: 0.0669
Threonine Absolute: 13  Threonine Relative: 0.0544  Tryptophan Absolute: 3
Tryptophan Relative: 0.0126  Tyrosine Absolute: 10  Tyrosine Relative: 0.0418
Valine Absolute: 17  Valine Relative: 0.0711  Project: GNF Autogenerated
Selection Date: 2009-11-12  PFAM: submit  
ProposalRelationshipOwnerLab Name
87JCSGGNFGenomics Institute of the Novartis Research Foundation

STAGE: Proposed Target

STAGE: Active Target

STAGE: PCR Testing

STAGE: Amplifer Generation

STAGE: Orientation

STAGE: Plasmid Purification

STAGE: Micro Expression

STAGE: Expression

STAGE: Protein Purification

STAGE: Crystallization

STAGE: Crystal Hit

STAGE: SDC Receiving

STAGE: Screening

STAGE: Data Collection

STAGE: Integration

STAGE: Scaling

STAGE: Truncating

STAGE: Phasing

STAGE: Density Modification

STAGE: Tracing

STAGE: MR Tracing

STAGE: Refining

STAGE: QC

STAGE: Validation

STAGE: PDB Deposition
Contact Webmaster JCSG Menu