JCSG Publications

Structural Publications
Methodological and Other Publications

Structural Publications

2011

Zhang Y, Zagnitko O, Rodionova I, Osterman A, Godzik A
(2011)
The FGGY Carbohydrate Kinase Family: Insights into the Evolution of Functional Specificities.
PLoS Computational Biology, 7, e1002318 (Pub Med ID: 22215998)
Times cited: no data

Xu Q, Rawlings ND, Chiu HJ, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2011)
Structural Analysis of Papain-Like NlpC/P60 Superfamily Enzymes with a Circularly Permuted Topology Reveals Potential Lipid Binding Sites.
PloS one, 6, e22013 (Pub Med ID: 21799766)
Times cited: 0

Xu Q, Rawlings ND, Farr CL, Chiu HJ, Grant JC, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Weekes D, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2011)
Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.
PloS one, 6, e21875 (Pub Med ID: 21799754)
Times cited: 0

Han GW, Ko J, Farr CL, Deller MC, Xu Q, Chiu HJ, Miller MD, Sefcikova J, Somarowthu S, Beuning PJ, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA, Ondrechen MJ
(2011)
Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2146-60 (Pub Med ID: 21538547) (PDB: 3E0F) (PDB: 3O0F)
Times cited: 0

Wahab AT, Serrano P, Geralt M, W�thrich K
(2011)
NMR structure of the Bordetella bronchiseptica protein NP_888769.1 establishes a new phage-related protein family PF13554.
Protein Science, 20, 1137-44 (Pub Med ID: 21520320)
Times cited: no data

Das D, Herv� M, Feuerhelm J, Farr CL, Chiu HJ, Elsliger MA, Knuth MW, Klock HE, Miller MD, Godzik A, Lesley SA, Deacon AM, Mengin-Lecreulx D, Wilson IA
(2011)
Structure and function of the first full-length murein Peptide ligase (mpl) cell wall recycling protein.
PloS one, 6, e17624 (Pub Med ID: 21445265) (PDB: 3HN7)
Times cited: 0

Hwang J, Kim Y, Kang HB, Jaroszewski L, Deacon AM, Lee H, Choi WC, Kim KJ, Kim CH, Kang BS, Lee JO, Oh TK, Kim JW, Wilson IA, Kim MH
(2011)
Crystal Structure of the Human N-Myc Downstream-regulated Gene 2 Protein Provides Insight into Its Role as a Tumor Suppressor.
Journal of Biological Chemistry, 286, 12450-60 (Pub Med ID: 21247902) (PDB: 2XMQ) (PDB: 2XMR) (PDB: 2XMS) (PDB: 2QMQ)
Times cited: 0

2010

Serrano P, Pedrini B, Geralt M, Jaudzems K, Mohanty B, Horst R, Herrmann T, Elsliger MA, Wilson IA, W�thrich K
(2010)
Comparison of NMR and crystal structures highlights conformational isomerism in protein active sites.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1393-405 (Pub Med ID: 20944236) (PDB: 2KA5) (PDB: 2KL2)
Times cited: 2

Mohanty B, Serrano P, Pedrini B, Jaudzems K, Geralt M, Horst R, Herrmann T, Elsliger MA, Wilson IA, W�thrich K
(2010)
Comparison of NMR and crystal structures for the proteins TM1112 and TM1367.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1381-92 (Pub Med ID: 20944235) (PDB: 2K9Z) (PDB: 2KA0)
Times cited: 4

Jaudzems K, Geralt M, Serrano P, Mohanty B, Horst R, Pedrini B, Elsliger MA, Wilson IA, W�thrich K
(2010)
NMR structure of the protein NP_247299.1: comparison with the crystal structure.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1367-80 (Pub Med ID: 20944234) (PDB: 2KLA)
Times cited: 2

Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Yeh A, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of the γ-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-γ-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1354-64 (Pub Med ID: 20944232) (PDB: 3H41)
Times cited: 3

Axelrod HL, Kozbial P, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Carlton D, Caruthers J, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Feuerhelm J, Grzechnik SK, Grant JC, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Tien HJ, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Zubieta C, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1347-53 (Pub Med ID: 20944231) (PDB: 3H50)
Times cited: 2

Axelrod HL, Das D, Abdubek P, Astakhova T, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Clayton T, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1335-46 (Pub Med ID: 20944230) (PDB: 2GLZ) (PDB: 2GVI) (PDB: 3D00)
Times cited: 2

Han GW, Yang XL, McMullan D, Chong YE, Krishna SS, Rife CL, Weekes D, Brittain SM, Abdubek P, Ambing E, Astakhova T, Axelrod HL, Carlton D, Caruthers J, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grant JC, Grzechnik SK, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Miller MD, Morse AT, Nigoghossian E, Okach L, Paulsen J, Reyes R, van den Bedem H, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Elsliger MA, Schimmel P, Wilson IA
(2010)
Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1326-34 (Pub Med ID: 20944229) (PDB: 2G36)
Times cited: 1

Chiu HJ, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Clayton T, Das D, Deller MC, Duan L, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Okach L, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of Haemophilus influenzaeprephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1317-25 (Pub Med ID: 20944228) (PDB: 2PV7)
Times cited: 0

Speers AE, Cravatt BF
(2010)
Ligands in crystal structures that aid in functional characterization.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1306-8 (Pub Med ID: 20944226)
Times cited: 1

Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Yeh A, Zhou J, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1297-305 (Pub Med ID: 20944225) (PDB: 3KK7)
Times cited: 2

Yeh AP, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 � resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1287-96 (Pub Med ID: 20944224) (PDB: 3HBZ)
Times cited: 0

Xu Q, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Yeh A, Zhou J, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 � resolution.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1281-6 (Pub Med ID: 20944223) (PDB: 3GF8)
Times cited: 1

Bakolitsa C, Xu Q, Rife CL, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1274-80 (Pub Med ID: 20944222) (PDB: 3CGH)
Times cited: 0

Das D, Finn RD, Carlton D, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, Ernst D, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1265-73 (Pub Med ID: 20944221) (PDB: 3DUE)
Times cited: 1

Das D, Kozbial P, Han GW, Carlton D, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, Elsliger MA, Ernst D, Farr CL, Feuerhelm J, Grzechnik A, Grant JC, Jin KK, Johnson HA, Klock HE, Knuth MW, Krishna SS, Kumar A, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Oommachen S, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1254-60 (Pub Med ID: 20944219) (PDB: 3F1Z)
Times cited: 1

Kumar A, Lomize A, Jin KK, Carlton D, Miller MD, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Klock HE, Knuth MW, Kozbial P, Krishna SS, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1245-53 (Pub Med ID: 20944218) (PDB: 2OOK) (PDB: 2Q3L)
Times cited: 4

Han GW, Elsliger MA, Yeates TO, Xu Q, Murzin AG, Krishna SS, Jaroszewski L, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ernst D, Feuerhelm J, Grant JC, Grzechnik A, Jin KK, Johnson HA, Klock HE, Knuth MW, Kozbial P, Kumar A, Lam WW, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Okach L, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1237-44 (Pub Med ID: 20944217) (PDB: 3NL9)
Times cited: 2

Xu Q, McMullan D, Jaroszewski L, Krishna SS, Elsliger MA, Yeh AP, Abdubek P, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grant J, Han GW, Jin KK, Klock HE, Knuth MW, Miller MD, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, van den Bedem H, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 � resolution.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1230-6 (Pub Med ID: 20944216) (PDB: 2A6A)
Times cited: 5

Han GW, Bakolitsa C, Miller MD, Kumar A, Carlton D, Najmanovich RJ, Abdubek P, Astakhova T, Axelrod HL, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Ernst D, Feuerhelm J, Grant JC, Grzechnik A, Jaroszewski L, Jin KK, Johnson HA, Klock HE, Knuth MW, Kozbial P, Krishna SS, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1218-25 (Pub Med ID: 20944214) (PDB: 2RE3) (PDB: 2RA9)
Times cited: 1

Bakolitsa C, Kumar A, McMullan D, Krishna SS, Miller MD, Carlton D, Najmanovich R, Abdubek P, Astakhova T, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Feuerhelm J, Grant JC, Grzechnik SK, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1211-7 (Pub Med ID: 20944213) (PDB: 2H1T)
Times cited: 2

Bakolitsa C, Kumar A, Carlton D, Miller MD, Krishna SS, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Grant JC, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Tien HJ, Trout CV, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of LP2179, the first representative of Pfam family PF08866, suggests a new fold with a role in amino-acid metabolism.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1205-10 (Pub Med ID: 20944212) (PDB: 2IAY)
Times cited: 1

Bakolitsa C, Bateman A, Jin KK, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Elias Y, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW, Jaroszewski L, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Sefcovic N, Tien H, Trame CB, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley S, Wilson IA
(2010)
The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 � resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1198-204 (Pub Med ID: 20944211) (PDB: 3H0N)
Times cited: 4

Bakolitsa C, Kumar A, Jin KK, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Elias Y, Ellrott K, Ernst D, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW, Jaroszewski L, Johnson HA, Klock HE, Knuth MW, Kozbial P, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Nopakun A, Okach L, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1182-9 (Pub Med ID: 20944209) (PDB: 3BYQ) (PDB: 2QTP)
Times cited: 0

Das D, Grishin NV, Kumar A, Carlton D, Bakolitsa C, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Burra P, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, Ernst D, Farr CL, Feuerhelm J, Grzechnik A, Grzechnik SK, Grant JC, Han GW, Jaroszewski L, Jin KK, Johnson HA, Klock HE, Knuth MW, Kozbial P, Krishna SS, Marciano D, McMullan D, Morse AT, Nigoghossian E, Nopakun A, Okach L, Oommachen S, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1174-81 (Pub Med ID: 20944208) (PDB: 3DEE)
Times cited: 0

Miller MD, Aravind L, Bakolitsa C, Rife CL, Carlton D, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Reyes R, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1167-73 (Pub Med ID: 20944207) (PDB: 3L5O)
Times cited: 0

Krishna SS, Aravind L, Bakolitsa C, Caruthers J, Carlton D, Miller MD, Abdubek P, Astakhova T, Axelrod HL, Chiu HJ, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Reyes R, Rife CL, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1160-6 (Pub Med ID: 20944206) (PDB: 3IRB)
Times cited: 2

Chiu HJ, Bakolitsa C, Skerra A, Lomize A, Carlton D, Miller MD, Krishna SS, Abdubek P, Astakhova T, Axelrod HL, Clayton T, Deller MC, Duan L, Feuerhelm J, Grant JC, Grzechnik SK, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Paulsen J, Reyes R, Rife CL, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1153-9 (Pub Med ID: 20944205) (PDB: 2ICH)
Times cited: 2

Xu Q, Eguchi T, Mathews II, Rife CL, Chiu HJ, Farr CL, Feuerhelm J, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Weekes D, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Insights into substrate specificity of geranylgeranyl reductases revealed by the structure of digeranylgeranylglycerophospholipid reductase, an essential enzyme in the biosynthesis of archaeal membrane lipids.
Journal of Molecular Biology, 404, 403-17 (Pub Med ID: 20869368) (PDB: 3OZ2)
Times cited: 1

Das D, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Yeh A, Zhou J, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu.
Protein Science, 19, 2131-40 (Pub Med ID: 20836087) (PDB: 3K5J)
Times cited: 2

Johnson MA, Jaudzems K, W�thrich K
(2010)
NMR Structure of the SARS-CoV Nonstructural Protein 7 in Solution at pH�6.5.
Journal of Molecular Biology, 402, 619-28 (Pub Med ID: 20709084) (PDB: 2KYS)
Times cited: 2

Ellrott K, Jaroszewski L, Li W, Wooley JC, Godzik A
(2010)
Expansion of the protein repertoire in newly explored environments: human gut microbiome specific protein families.
PLoS Computational Biology, 6, e1000798 (Pub Med ID: 20532204)
Times cited: 7

Johnson MA, Chatterjee A, Neuman BW, W�thrich K
(2010)
SARS coronavirus unique domain: three-domain molecular architecture in solution and RNA binding.
Journal of Molecular Biology, 400, 724-42 (Pub Med ID: 20493876) (PDB: 2KAF) (PDB: 2KQV) (PDB: 2KQW)
Times cited: 0

Dermoun Z, Foulon A, Miller MD, Harrington DJ, Deacon AM, Sebban-Kreuzer C, Roche P, Lafitte D, Bornet O, Wilson IA, Dolla A
(2010)
TM0486 from the hyperthermophilic anaerobe Thermotoga maritima is a thiamin-binding protein involved in response of the cell to oxidative conditions.
Journal of Molecular Biology, 400, 463-76 (Pub Med ID: 20471400) (PDB: 1VK8)
Times cited: 1

Matsumoto Y, Xu Q, Miyazaki S, Kaito C, Farr CL, Axelrod HL, Chiu HJ, Klock HE, Knuth MW, Miller MD, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Sekimizu K, Wilson IA
(2010)
Structure of a virulence regulatory factor CvfB reveals a novel winged helix RNA binding module.
Structure, 18, 537-47 (Pub Med ID: 20399190) (PDB: 3GO5)
Times cited: 2

Das D, Moiani D, Axelrod HL, Miller MD, McMullan D, Jin KK, Abdubek P, Astakhova T, Burra P, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Ernst D, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW, Jaroszewski L, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Paulsen J, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Tainer JA, Wilson IA
(2010)
Crystal Structure of the First Eubacterial Mre11 Nuclease Reveals Novel Features that May Discriminate Substrates During DNA Repair.
Journal of Molecular Biology, 397, 647-663 (Pub Med ID: 20122942) (PDB: 2Q8U)
Times cited: 6

Scheeff ED, Axelrod HL, Miller MD, Chiu HJ, Deacon AM, Wilson IA, Manning G
(2010)
Genomics, evolution, and crystal structure of a new family of bacterial spore kinases.
Proteins, 78, 1470-82 (Pub Med ID: 20077512) (PDB: 2Q83)
Times cited: 0

Xu Q, Bateman A, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Ernst D, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2010)
Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin for the PH Domain.
Journal of Molecular Biology, 396, 31-46 (Pub Med ID: 19913036) (PDB: 3DCX) (PDB: 3HSA) (PDB: 3B77)
Times cited: 1

2009

Serrano P, Johnson MA, Chatterjee A, Neuman BW, Joseph JS, Buchmeier MJ, Kuhn P, W�thrich K
(2009)
Nuclear magnetic resonance structure of the nucleic acid-binding domain of severe acute respiratory syndrome coronavirus nonstructural protein 3.
Journal of Virology, 83, 12998-3008 (Pub Med ID: 19828617) (PDB: 2K87)
Times cited: 3

Jaroszewski L, Li Z, Krishna SS, Bakolitsa C, Wooley J, Deacon AM, Wilson IA, Godzik A
(2009)
Exploration of uncharted regions of the protein universe.
PLoS Biology, 7, e1000205 (Pub Med ID: 19787035)
Times cited: 15

Zhang Y, Thiele I, Weekes D, Li Z, Jaroszewski L, Ginalski K, Deacon AM, Wooley J, Lesley SA, Wilson IA, Palsson B, Osterman A, Godzik A
(2009)
Three-dimensional structural view of the central metabolic network of Thermotoga maritima.
Science, 325, 1544-9 (Pub Med ID: 19762644)
Times cited: 31

Xu Q, Traag BA, Willemse J, McMullan D, Miller MD, Elsliger MA, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Chruszcz M, Clayton T, Das D, Deller MC, Duan L, Ellrott K, Ernst D, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Marciano D, Minor W, Mommaas AM, Morse AT, Nigoghossian E, Nopakun A, Okach L, Oommachen S, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Wang S, Weekes D, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, van Wezel GP
(2009)
Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes.
Journal of Biological Chemistry, 284, 25268-79 (Pub Med ID: 19567872) (PDB: 3CM1)
Times cited: 5

Wang Z, Chernyshev A, Koehn EM, Manuel TD, Lesley SA, Kohen A
(2009)
Oxidase activity of a flavin-dependent thymidylate synthase.
FEBS Journal, 276, 2801-10 (Pub Med ID: 19459936) (PDB: 1024) (PDB: 1025) (PDB: 1026) (PDB: 1027) (PDB: 1028) (PDB: 102B) (PDB: 1029) (PDB: 102A) (PDB: 1KQ4)
Times cited: 2

Xu Q, Carlton D, Miller MD, Elsliger MA, Krishna SS, Abdubek P, Astakhova T, Burra P, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, McMullan D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Sefcovic N, Trame C, Trout CV, van den Bedem H, Weekes D, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2009)
Crystal structure of histidine phosphotransfer protein ShpA, an essential regulator of stalk biogenesis in Caulobacter crescentus.
Journal of Molecular Biology, 390, 686-98 (Pub Med ID: 19450606) (PDB: 2OOC)
Times cited: 2

Koehn EM, Fleischmann T, Conrad JA, Palfey BA, Lesley SA, Mathews II, Kohen A
(2009)
An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene.
Nature, 458, 919-23 (Pub Med ID: 19370033) (PDB: 1O24) (PDB: 1O25) (PDB: 1O26) (PDB: 1O27) (PDB: 1O28) (PDB: 1O2B) (PDB: 1029) (PDB: 1O2A) (PDB: 1KQ4)
Times cited: 15

Zheng M, Cooper DR, Grossoehme NE, Yu M, Hung LW, Cieslik M, Derewenda U, Lesley SA, Wilson IA, Giedroc DP, Derewenda ZS
(2009)
Structure of Thermotoga maritima TM0439: implications for the mechanism of bacterial GntR transcription regulators with Zn2+-binding FCD domains.
Acta Crystallographica Section D: Biological Crystallography, 65, 356-65 (Pub Med ID: 19307717) (PDB: 3FMS)
Times cited: 1

Xu Q, Sudek S, McMullan D, Miller MD, Geierstanger B, Jones DH, Krishna SS, Spraggon G, Bursalay B, Abdubek P, Acosta C, Ambing E, Astakhova T, Axelrod HL, Carlton D, Caruthers J, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Won Han G, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Trout CV, van den Bedem H, Weekes D, White A, Wolf G, Zubieta C, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2009)
Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase.
Structure, 17, 303-313 (Pub Med ID: 19217401) (PDB: 2HBW) (PDB: 2FG0) (PDB: 2EVR)
Times cited: 8

Johnson HA, Hampton E, Lesley SA
(2009)
The Thermotoga maritima Trk potassium transporter--from frameshift to function.
Journal of Bacteriology, 191, 2276-84 (Pub Med ID: 19168617) (PDB: 2G1U)
Times cited: 1

Das D, Krishna SS, McMullan D, Miller MD, Xu Q, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Elsliger MA, Ernst D, Feuerhelm J, Grzechnik A, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Sefcovic N, Tien H, Trame CB, Trout CV, van den Bedem H, Weekes D, White A, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2009)
Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR-1 at 1.6 A resolution.
Proteins, 75, 264-71 (Pub Med ID: 19127588) (PDB: 3EQX)
Times cited: 7

Xu Q, Rife CL, Carlton D, Miller MD, Krishna SS, Elsliger MA, Abdubek P, Astakhova T, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, McMullan D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, van den Bedem H, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2009)
Crystal structure of a novel archaeal AAA+ ATPase SSO1545 from Sulfolobus solfataricus.
Proteins, 74, 1041-9 (Pub Med ID: 19089981) (PDB: 2FNA)
Times cited: 1

Chatterjee A, Johnson MA, Serrano P, Pedrini B, Joseph JS, Neuman BW, Saikatendu K, Buchmeier MJ, Kuhn P, W�thrich K
(2009)
Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold.
Journal of Virology, 83, 1823-36 (Pub Med ID: 19052085) (PDB: 2RNK) (PDB: 2JZD) (PDB: 2JZF) (PDB: 2JZE)
Times cited: 10

Xu Q, McMullan D, Abdubek P, Astakhova T, Carlton D, Chen C, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Hale J, Han GW, Jaroszewski L, Jin KK, Johnson HA, Klock HE, Knuth MW, Kozbial P, Sri Krishna S, Kumar A, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Oommachen S, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Trame C, van den Bedem H, Weekes D, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2009)
A structural basis for the regulatory inactivation of DnaA.
Journal of Molecular Biology, 385, 368-80 (Pub Med ID: 19000695) (PDB: 3BOS)
Times cited: 5

2008

Serrano P, Johnson MA, Chatterjee A, Pedrini B, W�thrich K
(2008)
NMR assignment of the nonstructural protein nsp3(1066-1181) from SARS-CoV.
Biomolecular NMR Assignments, 2, 135-8 (Pub Med ID: 19636888) (PDB: 2K87)
Times cited: 2

Das D, Kozbial P, Axelrod HL, Miller MD, McMullan D, Krishna SS, Abdubek P, Acosta C, Astakhova T, Burra P, Carlton D, Chen C, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Elsliger MA, Ernst D, Farr C, Feuerhelm J, Grzechnik A, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Johnson HA, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Nopakun A, Okach L, Oommachen S, Paulsen J, Puckett C, Reyes R, Rife CL, Sefcovic N, Sudek S, Tien H, Trame C, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2008)
Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 A resolution.
Proteins, 75, 296-307 (Pub Med ID: 19173316) (PDB: 3BY7)
Times cited: no data

McCleverty CJ, Columbus L, Kreusch A, Lesley SA
(2008)
Structure and ligand binding of the soluble domain of a Thermotoga maritima membrane protein of unknown function TM1634.
Protein Science, 17(5), 869-77 (Pub Med ID: 18369189)
Times cited: 1

Neuman BW, Joseph JS, Saikatendu KS, Serrano P, Chatterjee A, Johnson MA, Liao L, Klaus JP, Yates JR, W�thrich K, Stevens RC, Buchmeier MJ, Kuhn P
(2008)
Proteomics analysis unravels the functional repertoire of coronavirus nonstructural protein 3.
Journal of Virology, 82, 5279-94 (Pub Med ID: 18367524)
Times cited: 26

Kozbial P, Xu Q, Chiu HJ, McMullan D, Krishna SS, Miller MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Carlton D, Clayton T, Deller M, Duan L, Elias Y, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Spraggon G, Trout CV, van den Bedem H, Weekes D, White A, Wolf G, Zubieta C, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2008)
Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold.
Proteins, 71(3), 1589-96 (Pub Med ID: 18324683) (PDB: 2ETS) (PDB: 2HUJ)
Times cited: 0

Xu Q, Kozbial P, McMullan D, Krishna SS, Brittain SM, Ficarro SB, DiDonato M, Miller MD, Abdubek P, Axelrod HL, Chiu HJ, Clayton T, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Klock HE, Morse AT, Nigoghossian E, Paulsen J, Reyes R, Rife CL, van den Bedem H, White A, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2008)
Crystal structure of an ADP-ribosylated protein with a cytidine deaminase-like fold, but unknown function (TM1506), from Thermotoga maritima at 2.70 A resolution.
Proteins, 71(3), 1546-52 (Pub Med ID: 18275082) (PDB: 1VK9)
Times cited: 2

Axelrod HL, McMullan D, Krishna SS, Miller MD, Elsliger MA, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Duan L, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rife CL, van den Bedem H, Weekes D, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2008)
Crystal structure of AICAR transformylase IMP cyclohydrolase (TM1249) from Thermotoga maritima at 1.88 A resolution.
Proteins, 71(2), 1042-9 (Pub Med ID: 18260100) (PDB: 1ZCZ)
Times cited: 3

Mathews II, McMullan D, Miller MD, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, McPhillips TM, Morse AT, Quijano K, Rife CL, Schwarzenbacher R, Spraggon G, Stevens RC, van den Bedem H, Weekes D, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2008)
Crystal structure of 2-keto-3-deoxygluconate kinase (TM0067) from Thermotoga maritima at 2.05 A resolution.
Proteins, 70(2), 603-8 (Pub Med ID: 18004772) (PDB: 2AFB)
Times cited: 2

2007

Chatterjee A, Johnson MA, Serrano P, Pedrini B, W�thrich K
(2007)
NMR assignment of the domain 513-651 from the SARS-CoV nonstructural protein nsp3.
Biomolecular NMR Assignments, 1, 191-4 (Pub Med ID: 19636862) (PDB: 2RNK) (PDB: 2JZF)
Times cited: 3

Serrano P, Johnson MA, Almeida MS, Horst R, Herrmann T, Joseph JS, Neuman BW, Subramanian V, Saikatendu KS, Buchmeier MJ, Stevens RC, Kuhn P, W�thrich K
(2007)
Nuclear magnetic resonance structure of the N-terminal domain of nonstructural protein 3 from the severe acute respiratory syndrome coronavirus.
Journal of Virology, 81(21), 12049-60 (Pub Med ID: 17728234) (PDB: 2GRI) (PDB: 2IDY)
Times cited: 14

Huang S, Romanchuk G, Pattridge K, Lesley SA, Wilson IA, Matthews RG, Ludwig M
(2007)
Reactivation of methionine synthase from Thermotoga maritima (TM0268) requires the downstream gene product TM0269.
Protein Science, 16(8), 1588-95 (Pub Med ID: 17656578)
Times cited: 1

Xu Q, Saikatendu KS, Krishna SS, McMullan D, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Miller MD, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Reyes R, Rife CL, Schwarzenbacher R, van den Bedem H, White A, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structure of MtnX phosphatase from Bacillus subtilis at 2.0 A resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate.
Proteins, 69(2), 433-9 (Pub Med ID: 17654724) (PDB: 2FEA)
Times cited: 1

Zubieta C, Joseph R, Krishna SS, McMullan D, Kapoor M, Axelrod HL, Miller MD, Abdubek P, Acosta C, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elias Y, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Schimmel P, Trout CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA.
Proteins, 69(2), 234-43 (Pub Med ID: 17654547) (PDB: 2IIZ)
Times cited: 20

Zubieta C, Krishna SS, Kapoor M, Kozbial P, McMullan D, Axelrod HL, Miller MD, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Schimmel P, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif.
Proteins, 69(2), 223-33 (Pub Med ID: 17654545) (PDB: 2GVK) (PDB: 2HAG)
Times cited: 18

Krishna SS, Tautz L, Xu Q, McMullan D, Miller MD, Abdubek P, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Morse AT, Mustelin T, Nigoghossian E, Oommachen S, Reyes R, Rife CL, van den Bedem H, Weekes D, White A, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structure of NMA1982 from Neisseria meningitidis at 1.5 A resolution provides a structural scaffold for nonclassical, eukaryotic-like phosphatases.
Proteins, 69(2), 415-21 (Pub Med ID: 17636569) (PDB: 2F46)
Times cited: 3

Chernyshev A, Fleischmann T, Koehn EM, Lesley SA, Kohen A
(2007)
The relationships between oxidase and synthase activities of flavin dependent thymidylate synthase (FDTS).
Chemical Communications, 53, 2861-3 (Pub Med ID: 17609801)
Times cited: 3

Zubieta C, Krishna SS, McMullan D, Miller MD, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, Deller M, DiDonato M, Duan L, Elsliger MA, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kumar A, Marciano D, Morse AT, Nigoghossian E, Oommachen S, Reyes R, Rife CL, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution.
Proteins, 68(4), 999-1005 (Pub Med ID: 17546672) (PDB: 2GHR)
Times cited: 5

Premkumar L, Rife CL, Sri Krishna S, McMullan D, Miller MD, Abdubek P, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, Feuerhelm J, Floyd R, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kovarik JS, Kreusch A, Levin I, McPhillips TM, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rezezadeh F, Rodionov D, Schwarzenbacher R, Spraggon G, van den Bedem H, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structure of TM1030 from Thermotoga maritima at 2.3 A resolution reveals molecular details of its transcription repressor function.
Proteins, 68(1), 418-24 (Pub Med ID: 17444523) (PDB: 1ZKG)
Times cited: 3

Weekes D, Miller MD, Krishna SS, McMullan D, McPhillips TM, Acosta C, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Morse AT, Quijano K, Spraggon G, van den Bedem H, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2007)
Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 A resolution.
Proteins, 67(1), 247-52 (Pub Med ID: 17256761) (PDB: 1J5Y)
Times cited: 1

Almeida MS, Johnson MA, Herrmann T, Geralt M, W�thrich K
(2007)
Novel beta-barrel fold in the nuclear magnetic resonance structure of the replicase nonstructural protein 1 from the severe acute respiratory syndrome coronavirus.
Journal of Virology, 81(7), 3151-61 (Pub Med ID: 17202208) (PDB: 2HSX)
Times cited: 17

2006

Kosloff M, Han GW, Krishna SS, Schwarzenbacher R, Fasnacht M, Elsliger MA, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Feuerhelm J, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Jaroszewski L, Jin KK, Johnson H, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Levin I, McMullan D, Miller MD, Morse AT, Moy K, Nigoghossian E, Okach L, Oommachen S, Page R, Paulsen J, Quijano K, Reyes R, Rife CL, Sims E, Spraggon G, Sridhar V, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Comparative structural analysis of a novel glutathioneS-transferase (ATU5508) from Agrobacterium tumefaciens at 2.0 A resolution.
Proteins, 65(3), 527-37 (Pub Med ID: 16988933) (PDB: 2FNO)
Times cited: 3

Xu Q, Krishna SS, McMullan D, Schwarzenbacher R, Miller MD, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rife CL, Spraggon G, Stevens RC, van den Bedem H, White A, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Crystal structure of an ORFan protein (TM1622) from Thermotoga maritima at 1.75 A resolution reveals a fold similar to the Ran-binding protein Mog1p.
Proteins, 65(3), 777-82 (Pub Med ID: 16948158) (PDB: 1VR8)
Times cited: 4

DiDonato M, Krishna SS, Schwarzenbacher R, McMullan D, Agarwalla S, Brittain SM, Miller MD, Abdubek P, Ambing E, Axelrod HL, Canaves JM, Chiu HJ, Deacon AM, Duan L, Elsliger MA, Godzik A, Grzechnik SK, Hale J, Hampton E, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Lesley SA, Levin I, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rife CL, Spraggon G, Stevens RC, van den Bedem H, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2006)
Crystal structure of 2-phosphosulfolactate phosphatase (ComB) from Clostridium acetobutylicum at 2.6 A resolution reveals a new fold with a novel active site.
Proteins, 65(3), 771-6 (Pub Med ID: 16927339) (PDB: 1VR0)
Times cited: 2

Mathews II, Krishna SS, Schwarzenbacher R, McMullan D, Jaroszewski L, Miller MD, Abdubek P, Agarwalla S, Ambing E, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Elsliger MA, Grzechnik SK, Hale J, Hampton E, Haugen J, Jin KK, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Levin I, Morse AT, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rife CL, Spraggon G, Stevens RC, van den Bedem H, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Crystal structure of phosphoribosylformyl-glycinamidine synthase II, PurS subunit (TM1244) from Thermotoga maritima at 1.90 A resolution.
Proteins, 65(1), 249-54 (Pub Med ID: 16865708) (PDB: 1VQ3)
Times cited: 3

Schwarzenbacher R, McMullan D, Krishna SS, Xu Q, Miller MD, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, McPhillips TM, Morse AT, Quijano K, Spraggon G, Stevens RC, van den Bedem H, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Crystal structure of a glycerate kinase (TM1585) from Thermotoga maritima at 2.70 A resolution reveals a new fold.
Proteins, 65(1), 243-8 (Pub Med ID: 16865707) (PDB: 2B8N)
Times cited: 4

Eshaghi S, Niegowski D, Kohl A, Martinez Molina D, Lesley SA, Nordlund P
(2006)
Crystal structure of a divalent metal ion transporter CorA at 2.9 angstrom resolution.
Science, 313(5785), 354-7 (Pub Med ID: 16857941)
Times cited: 64

Etezady-Esfarjani T, Placzek WJ, Herrmann T, W�thrich K
(2006)
Solution structures of the putative anti-sigma-factor antagonist TM1442 from Thermotoga maritima in the free and phosphorylated states.
Magnetic Resonance in Chemistry, 44 Spec No(16), S61-70 (Pub Med ID: 16826544) (PDB: 1SBO) (PDB: 1T6R)
Times cited: 5

Almeida MS, Johnson MA, W�thrich K
(2006)
NMR assignment of the SARS-CoV protein nsp1.
Journal of Biomolecular NMR, 36 Suppl 1(4), 46 (Pub Med ID: 16821128)
Times cited: 6

Serrano P, Almeida MS, Johnson MA, W�thrich K
(2006)
NMR assignment of the protein nsp3a from SARS-CoV.
Journal of Biomolecular NMR, 36 Suppl 1(1), 45 (Pub Med ID: 16799860)
Times cited: 2

Xu Q, Schwarzenbacher R, Krishna SS, McMullan D, Agarwalla S, Quijano K, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Elsliger MA, Grittini C, Grzechnik SK, DiDonato M, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Miller MD, Moy K, Nigoghossian E, Paulsen J, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Crystal structure of acireductone dioxygenase (ARD) from Mus musculus at 2.06 angstrom resolution.
Proteins, 64(3), 808-13 (Pub Med ID: 16783794) (PDB: 1VR3)
Times cited: 10

Han GW, Sri Krishna S, Schwarzenbacher R, McMullan D, Ginalski K, Elsliger MA, Brittain SM, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod H, Canaves JM, Chiu HJ, DiDonato M, Grzechnik SK, Hale J, Hampton E, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Miller MD, Morse AT, Moy K, Nigoghossian E, Oommachen S, Ouyang J, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Wang X, West B, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
(2006)
Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution.
Proteins, 64(4), 1083-90 (Pub Med ID: 16779835) (PDB: 1VRM)
Times cited: 4

Mason A, Agrawal N, Washington MT, Lesley SA, Kohen A
(2006)
A lag-phase in the reduction of flavin dependent thymidylate synthase (FDTS) revealed a mechanistic missing link.
Chemical Communications, 21(3)(16), 1781-3 (Pub Med ID: 16609803)
Times cited: 7

Johnson MA, Peti W, Herrmann T, Wilson IA, W�thrich K
(2006)
Solution structure of Asl1650, an acyl carrier protein from Anabaena sp. PCC 7120 with a variant phosphopantetheinylation-site sequence.
Protein Science, 15(5), 1030-41 (Pub Med ID: 16597827)
Times cited: 10

Mathews II, Krishna SS, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Levin I, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2006)
Crystal structure of phosphoribosylformylglycinamidine synthase II (smPurL) from Thermotoga maritima at 2.15 A resolution.
Proteins, 63(4), 1106-11 (Pub Med ID: 16544324) (PDB: 1VK3)
Times cited: 5

Jin KK, Krishna SS, Schwarzenbacher R, McMullan D, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Feuerhelm J, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Okach L, Oommachen S, Paulsen J, Quijano K, Reyes R, Rife C, Stevens RC, Spraggon G, van den Bedem H, Velasquez J, White A, Wolf G, Han GW, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2006)
Crystal structure of TM1367 from Thermotoga maritima at 1.90 A resolution reveals an atypical member of the cyclophilin (peptidylprolyl isomerase) fold.
Proteins, 63(4), 1112-8 (Pub Med ID: 16544291) (PDB: 1ZX8)
Times cited: 4

DiDonato M, Krishna SS, Schwarzenbacher R, McMullan D, Jaroszewski L, Miller MD, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Biorac T, Chiu HJ, Deacon AM, Elsliger MA, Feuerhelm J, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Hornsby M, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Lesley SA, Moy K, Nigoghossian E, Okach L, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2006)
Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution.
Proteins, 63(1), 256-60 (Pub Med ID: 16435371) (PDB: 1Z9F)
Times cited: 9

Robinson-Rechavi M, Alib�s A, Godzik A
(2006)
Contribution of electrostatic interactions, compactness and quaternary structure to protein thermostability: lessons from structural genomics of Thermotoga maritima.
Journal of Molecular Biology, 356(2), 547-57 (Pub Med ID: 16375925)
Times cited: 59

Xu Q, Schwarzenbacher R, McMullan D, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2006)
Crystal structure of virulence factor CJ0248 from Campylobacter jejuni at 2.25 A resolution reveals a new fold.
Proteins, 62(1), 292-6 (Pub Med ID: 16287129) (PDB: 1VQR)
Times cited: 1

2005

Klock HE, Schwarzenbacher R, Xu Q, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Koesema E, Kreusch A, Kuhn P, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Rife C, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Hodgson KO, Wooley J, Lesley SA, Wilson IA
(2005)
Crystal structure of a conserved hypothetical protein (gi: 13879369) from Mouse at 1.90 A resolution reveals a new fold.
Proteins, 61(4), 1132-6 (Pub Med ID: 16224779) (PDB: 1VKB)
Times cited: 6

Almeida MS, Herrmann T, Peti W, Wilson IA, W�thrich K
(2005)
NMR structure of the conserved hypothetical protein TM0487 from Thermotoga maritima: implications for 216 homologous DUF59 proteins.
Protein Science, 14(11), 2880-6 (Pub Med ID: 16199668)
Times cited: 3

Peti W, Johnson MA, Herrmann T, Neuman BW, Buchmeier MJ, Nelson M, Joseph J, Page R, Stevens RC, Kuhn P, W�thrich K
(2005)
Structural genomics of the severe acute respiratory syndrome coronavirus: nuclear magnetic resonance structure of the protein nsP7.
Journal of Virology, 79(20), 12905-13 (Pub Med ID: 16188992)
Times cited: 26

Jaroszewski L, Schwarzenbacher R, McMullan D, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of Hsp33 chaperone (TM1394) from Thermotoga maritima at 2.20 A resolution.
Proteins, 61(3), 669-73 (Pub Med ID: 16167343) (PDB: 1VQ0)
Times cited: 4

Chappie JS, C�naves JM, Han GW, Rife CL, Xu Q, Stevens RC
(2005)
The structure of a eukaryotic nicotinic acid phosphoribosyltransferase reveals structural heterogeneity among type II PRTases.
Structure, 13(9), 1385-96 (Pub Med ID: 16154095) (PDB: 1VLP)
Times cited: 17

Rife C, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of a putative modulator of DNA gyrase (pmbA) from Thermotoga maritima at 1.95 A resolution reveals a new fold.
Proteins, 61(2), 444-8 (Pub Med ID: 16104019) (PDB: 1VL4)
Times cited: 1

Rife C, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of the global regulatory protein CsrA from Pseudomonas putida at 2.05 A resolution reveals a new fold.
Proteins, 61(2), 449-53 (Pub Med ID: 16104018) (PDB: 1VPZ)
Times cited: 13

Han GW, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, McPhillips TM, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution.
Proteins, 60(4), 797-802 (Pub Med ID: 16001405) (PDB: 1VLR)
Times cited: 5

Robinson-Rechavi M, Godzik A
(2005)
Structural genomics of thermotoga maritima proteins shows that contact order is a major determinant of protein thermostability.
Structure, 13(6), 857-60 (Pub Med ID: 15939017)
Times cited: 29

Columbus L, Peti W, Etezady-Esfarjani T, Herrmann T, W�thrich K
(2005)
NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima.
Proteins, 60(3), 552-7 (Pub Med ID: 15937903) (PDB: 1T3V)
Times cited: 5

Mathews I, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Levin I, Miller MD, Moy K, Nigoghossian E, Ouyang J, Paulsen J, Quijano K, Reyes R, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA) from Thermotoga maritima at 2.0 A resolution reveals a new fold.
Proteins, 59(4), 869-74 (Pub Med ID: 15822125) (PDB: 1VKY)
Times cited: 6

Levin I, Miller MD, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Biorac T, Cambell J, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Morse A, Moy K, Nigoghossian E, Ouyang J, Page R, Quijano K, Reyes R, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Zagnitko O, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of an indigoidine synthase A (IndA)-like protein (TM1464) from Thermotoga maritima at 1.90 A resolution reveals a new fold.
Proteins, 59(4), 864-8 (Pub Med ID: 15822122) (PDB: 1VKM)
Times cited: 5

Peti W, Herrmann T, Zagnitko O, Grzechnik SK, W�thrich K
(2005)
NMR structure of the conserved hypothetical protein TM0979 from Thermotoga maritima.
Proteins, 59(2), 387-90 (Pub Med ID: 15723348)
Times cited: 4

Arndt JW, Gu J, Jaroszewski L, Schwarzenbacher R, Hanson MA, Lebeda FJ, Stevens RC
(2005)
The structure of the neurotoxin-associated protein HA33/A from Clostridium botulinum suggests a reoccurring beta-trefoil fold in the progenitor toxin complex.
Journal of Molecular Biology, 346, 1083-93 (Pub Med ID: 15701519) (PDB: 1YBI)
Times cited: 24

Han GW, Schwarzenbacher R, Page R, Jaroszewski L, Abdubek P, Ambing E, Biorac T, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Hornsby M, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Nigoghossian E, Ouyang J, Paulsen J, Quijano K, Reyes R, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, White A, Wolf G, Xu Q, Zagnitko O, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of an alanine-glyoxylate aminotransferase from Anabaena sp. at 1.70 A resolution reveals a noncovalently linked PLP cofactor.
Proteins, 58(4), 971-5 (Pub Med ID: 15657930) (PDB: 1VJO)
Times cited: 9

Xu Q, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Biorac T, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hampton E, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Levin I, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Reyes R, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, White A, Wolf G, Zagnitko O, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of a formiminotetrahydrofolate cyclodeaminase (TM1560) from Thermotoga maritima at 2.80 A resolution reveals a new fold.
Proteins, 58(4), 976-81 (Pub Med ID: 15651027) (PDB: 1O5H)
Times cited: 1

Arndt JW, Schwarzenbacher R, Page R, Abdubek P, Ambing E, Biorac T, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Klock HE, Koesema E, Kreusch A, Kuhn P, Jaroszewski L, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Nigoghossian E, Ouyang J, Peti WS, Quijano K, Reyes R, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, White A, Wolf G, Xu Q, Zagnitko O, Hodgson KO, Wooley J, Wilson IA
(2005)
Crystal structure of an alpha/beta serine hydrolase (YDR428C) from Saccharomyces cerevisiae at 1.85 A resolution.
Proteins, 58(3), 755-8 (Pub Med ID: 15624212) (PDB: 1VKH)
Times cited: 5

2004

Miller MD, Schwarzenbacher R, von Delft F, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a tandem cystathionine-beta-synthase (CBS) domain protein (TM0935) from Thermotoga maritima at 1.87 A resolution.
Proteins, 57(1), 213-7 (Pub Med ID: 15326606) (PDB: 1O50)
Times cited: 25

Greenwald J, Vega ME, Allendorph GP, Fischer WH, Vale W, Choe S
(2004)
A flexible activin explains the membrane-dependent cooperative assembly of TGF-beta family receptors.
Molecular Cell, 15(3), 485-9 (Pub Med ID: 15304227) (PDB: 1S4Y)
Times cited: 55

Agrawal N, Lesley SA, Kuhn P, Kohen A
(2004)
Mechanistic studies of a flavin-dependent thymidylate synthase.
Biochemistry, 43(32), 10295-301 (Pub Med ID: 15301527)
Times cited: 31

Levin I, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Biorac T, Cambell J, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Reyes R, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a putative NADPH-dependent oxidoreductase (GI: 18204011) from mouse at 2.10 A resolution.
Proteins, 56(3), 629-33 (Pub Med ID: 15229897) (PDB: 1VJ1)
Times cited: 5

Xu Q, Schwarzenbacher R, Page R, Sims E, Abdubek P, Ambing E, Biorac T, Brinen LS, Cambell J, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Quijano K, Reyes R, Rezezadeh F, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of an allantoicase (YIR029W) from Saccharomyces cerevisiae at 2.4 A resolution.
Proteins, 56(3), 619-24 (Pub Med ID: 15229895) (PDB: 1O59)
Times cited: 2

McMullan D, Schwarzenbacher R, Jaroszewski L, von Delft F, Klock HE, Vincent J, Quijano K, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Koesema E, Kreusch A, Kuhn P, Levin I, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Reyes R, Rezezadeh F, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Lesley SA, Wilson IA
(2004)
Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from the cupin family at 1.83 A resolution.
Proteins, 56(3), 615-8 (Pub Med ID: 15229894) (PDB: 1O5U)
Times cited: 3

Jaroszewski L, Schwarzenbacher R, von Delft F, McMullan D, Brinen LS, Canaves JM, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Levin I, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Reyes R, Rezezadeh F, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution.
Proteins, 56(3), 611-4 (Pub Med ID: 15229893) (PDB: 1O5N)
Times cited: 8

Bakolitsa C, Schwarzenbacher R, McMullan D, Brinen LS, Canaves JM, Dai X, Deacon AM, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of an orphan protein (TM0875) from Thermotoga maritima at 2.00-A resolution reveals a new fold.
Proteins, 56(3), 607-10 (Pub Med ID: 15229892) (PDB: 1O22)
Times cited: 2

Almeida MS, Peti W, W�thrich K
(2004)
1H-, 13C- and 15N-NMR assignment of the conserved hypothetical protein TM0487 from Thermotoga maritima.
Journal of Biomolecular NMR, 29(3), 453-4 (Pub Med ID: 15213465)
Times cited: 3

Etezady-Esfarjani T, Herrmann T, Peti W, Klock HE, Lesley SA, W�thrich K
(2004)
NMR structure determination of the hypothetical protein TM1290 from Thermotoga maritima using automated NOESY analysis.
Journal of Biomolecular NMR, 29(3), 403-6 (Pub Med ID: 15213441) (PDB: 1RDU)
Times cited: 15

Levin I, Schwarzenbacher R, Page R, Abdubek P, Ambing E, Biorac T, Brinen LS, Campbell J, Canaves JM, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Quijano K, Reyes R, Rezezadeh F, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 A resolution.
Proteins, 56(2), 404-8 (Pub Med ID: 15211526) (PDB: 1O4W)
Times cited: 10

Spraggon G, Schwarzenbacher R, Kreusch A, McMullan D, Brinen LS, Canaves JM, Dai X, Deacon AM, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kuhn P, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Rezezadeh F, Robb A, Sims E, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Lesley SA, Wilson IA
(2004)
Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 A resolution.
Proteins, 56(2), 396-400 (Pub Med ID: 15211524) (PDB: 1O0X)
Times cited: 9

Schwarzenbacher R, von Delft F, Jaroszewski L, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 A resolution.
Proteins, 56(2), 392-5 (Pub Med ID: 15211523) (PDB: 1O4T)
Times cited: 12

Heine A, Canaves JM, von Delft F, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MA, Miller MD, Morse A, Moy K, Ouyang J, Page R, Robb A, Rodrigues K, Schwarzenbacher R, Selby TL, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.8 A resolution.
Proteins, 56(2), 387-91 (Pub Med ID: 15211522) (PDB: 1O58)
Times cited: 8

Xu Q, Schwarzenbacher R, McMullan D, von Delft F, Brinen LS, Canaves JM, Dai X, Deacon AM, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 A resolution.
Proteins, 56(1), 171-5 (Pub Med ID: 15162497) (PDB: 1O1X)
Times cited: 9

Santelli E, Schwarzenbacher R, McMullan D, Biorac T, Brinen LS, Canaves JM, Cambell J, Dai X, Deacon AM, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Rezezadeh F, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Proteins, 56(1), 167-70 (Pub Med ID: 15162496) (PDB: 1O1Z)
Times cited: 10

Canaves JM
(2004)
Predicted role for the archease protein family based on structural and sequence analysis of TM1083 and MTH1598, two proteins structurally characterized through structural genomics efforts.
Proteins, 56(1), 19-27 (Pub Med ID: 15162483)
Times cited: 4

Spraggon G, Schwarzenbacher R, Kreusch A, Lee CC, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kuhn P, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Lesley SA, Wilson IA
(2004)
Crystal structure of an Udp-n-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution.
Proteins, 55(4), 1078-81 (Pub Med ID: 15146505) (PDB: 1J6U)
Times cited: 15

Schwarzenbacher R, Jaroszewski L, von Delft F, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 A resolution.
Proteins, 55(3), 768-71 (Pub Med ID: 15103640) (PDB: 1QPN)
Times cited: 9

Schwarzenbacher R, Jaroszewski L, von Delft F, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of an aspartate aminotransferase (TM1255) from Thermotoga maritima at 1.90 A resolution.
Proteins, 55(3), 759-63 (Pub Med ID: 15103638) (PDB: 1O4S)
Times cited: 5

Grynberg M, Godzik A
(2004)
NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1.
Trends in Biochemical Sciences, 29(3), 106-10 (Pub Med ID: 15055202)
Times cited: 1

Schwarzenbacher R, Jaroszewski L, von Delft F, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a phosphoribosylaminoimidazole mutase PurE (TM0446) from Thermotoga maritima at 1.77-A resolution.
Proteins, 55(2), 474-8 (Pub Med ID: 15048837) (PDB: 1O4V)
Times cited: 6

Schwarzenbacher R, von Delft F, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Cambell J, Chiu HJ, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 A resolution.
Proteins, 54(4), 810-3 (Pub Med ID: 14997579) (PDB: 1O51)
Times cited: 14

Erlandsen H, Canaves JM, Elsliger MA, von Delft F, Brinen LS, Dai X, Deacon AM, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Robb A, Quijano K, Schwarzenbacher R, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of an HEPN domain protein (TM0613) from Thermotoga maritima at 1.75 A resolution.
Proteins, 54(4), 806-9 (Pub Med ID: 14997578)
Times cited: 3

Schwarzenbacher R, Deacon AM, Jaroszewski L, Brinen LS, Canaves JM, Dai X, Elsliger MA, Floyd R, Godzik A, Grittini C, Grzechnik SK, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Nelson MS, Ouyang J, Page R, Robb A, Quijano K, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 A resolution.
Proteins, 54(4), 801-5 (Pub Med ID: 14997577) (PDB: 1O1Y)
Times cited: 1

Schwarzenbacher R, von Delft F, Canaves JM, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MA, Miller MD, Morse A, Moy K, Ouyang J, Page R, Robb A, Rodrigues K, Selby TL, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 A resolution.
Proteins, 54(1), 174-7 (Pub Med ID: 14705036) (PDB: 1O2D)
Times cited: 18

Page R, Nelson MS, von Delft F, Elsliger MA, Canaves JM, Brinen LS, Dai X, Deacon AM, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Robb A, Rodrigues K, Schwarzenbacher R, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2004)
Crystal structure of gamma-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.0 A resolution.
Proteins, 54(1), 157-61 (Pub Med ID: 14705032)
Times cited: 6

2003

Grynberg M, Jaroszewski L, Godzik A
(2003)
Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization.
BMC Bioinformatics, 4(5), 46 (Pub Med ID: 14536023)
Times cited: 18

Schwarzenbacher R, Canaves JM, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MA, Miller MD, Morse A, Moy K, Ouyang J, Robb A, Rodrigues K, Selby TL, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA
(2003)
Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution.
Proteins, 53(1), 142-5 (Pub Med ID: 12945057)
Times cited: 8

Kreusch A, Spraggon G, Lee CC, Klock H, McMullan D, Ng K, Shin T, Vincent J, Warner I, Ericson C, Lesley SA
(2003)
Structure analysis of peptide deformylases from Streptococcus pneumoniae, Staphylococcus aureus, Thermotoga maritima and Pseudomonas aeruginosa: snapshots of the oxygen sensitivity of peptide deformylase.
Journal of Molecular Biology, 330(2), 309-21 (Pub Med ID: 12823970)
Times cited: 21

Mathews II, Deacon AM, Canaves JM, McMullan D, Lesley SA, Agarwalla S, Kuhn P
(2003)
Functional analysis of substrate and cofactor complex structures of a thymidylate synthase-complementing protein.
Structure, 11(6), 677-90 (Pub Med ID: 12791256)
Times cited: 37

Grynberg M, Erlandsen H, Godzik A
(2003)
HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins.
Trends in Biochemical Sciences, 28(5), 224-6 (Pub Med ID: 12765831)
Times cited: 10

Etezady-Esfarjani T, Peti W, W�thrich K
(2003)
NMR assignment of the conserved hypothetical protein TM1290 of Thermotoga maritima.
Journal of Biomolecular NMR, 25(2), 167-8 (Pub Med ID: 12652129)
Times cited: 10

Brinen LS, Canaves JM, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MA, Miller MD, Morse A, Moy K, Ouyang J, Robb A, Rodrigues K, Selby TL, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Taylor SS, Hodgson KO, Wooley J, Wilson IA
(2003)
Crystal structure of a zinc-containing glycerol dehydrogenase (TM0423) from Thermotoga maritima at 1.5 A resolution.
Proteins, 50(2), 371-4 (Pub Med ID: 12486729)
Times cited: 6

2002

Kuhn P, Lesley SA, Mathews II, Canaves JM, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Guda C, Hodgson KO, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JM, Kreusch AT, McMullan D, McPhillips TM, Miller MA, Miller M, Morse A, Moy K, Ouyang J, Robb A, Rodrigues K, Selby TL, Spraggon G, Stevens RC, Taylor SS, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Wooley J, Wilson IA
(2002)
Crystal structure of thy1, a thymidylate synthase complementing protein from Thermotoga maritima at 2.25 A resolution.
Proteins, 49(1), 142-5 (Pub Med ID: 12211025)
Times cited: 30

Total number of citations for structural publications: 1092
Average number of citations per publication (structural): 7.4

Methodological and Other Publications

2011

Fraser JS, van den Bedem H, Samelson AJ, Lang PT, Holton JM, Echols N, Alber T
(2011)
Accessing protein conformational ensembles using room-temperature X-ray crystallography.
Proceedings of the National Academy of Sciences of the United States of America, 108, 16247-52 (Pub Med ID: 21918110)
Times cited: 0

Janaratne TK, Okach L, Brock A, Lesley SA
(2011)
Solubilization of Native Integral Membrane Proteins in Aqueous Buffer by Noncovalent Chelation with Monomethoxy Poly(ethylene glycol) (mPEG) Polymers.
Bioconjugate chemistry, 22, 1513-8 (Pub Med ID: 21740061)
Times cited: 0

Cai XH, Jaroszewski L, Wooley J, Godzik A
(2011)
Internal organization of large protein families: Relationship between the sequence, structure, and function-based clustering.
Proteins, 79, 2389-402 (Pub Med ID: 21671455)
Times cited: 0

DiMaio F, Terwilliger TC, Read RJ, Wlodawer A, Oberdorfer G, Wagner U, Valkov E, Alon A, Fass D, Axelrod HL, Das D, Vorobiev SM, Iwa� H, Pokkuluri PR, Baker D
(2011)
Improved molecular replacement by density- and energy-guided protein structure optimization.
Nature, 473, 540-3 (Pub Med ID: 21532589)
Times cited: 7

Godzik A
(2011)
Metagenomics and the protein universe.
Current Opinion in Structural Biology, 21, 398-403 (Pub Med ID: 21497084)
Times cited: 0

van den Bedem H, Wolf G, Xu Q, Deacon AM
(2011)
Distributed structure determination at the JCSG.
Acta Crystallographica Section D: Biological Crystallography, 67, 368-75 (Pub Med ID: 21460455)
Times cited: 0

Forse GJ, Ram N, Banatao DR, Cascio D, Sawaya MR, Klock HE, Lesley SA, Yeates TO
(2011)
Synthetic symmetrization in the crystallization and structure determination of CelA from Thermotoga maritima.
Protein Science, 20, 168-78 (Pub Med ID: 21082721)
Times cited: 1

Ellrott K, Zmasek CM, Weekes D, Sri Krishna S, Bakolitsa C, Godzik A, Wooley J
(2011)
TOPSAN: a dynamic web database for structural genomics.
Nucleic Acids Research, 39, D494-6 (Pub Med ID: 20961957)
Times cited: 0

2010

W�thrich K
(2010)
NMR in a crystallography-based high-throughput protein structure-determination environment.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1365-6 (Pub Med ID: 20944233)
Times cited: 2

Kumar A, Chiu HJ, Axelrod HL, Morse A, Elsliger MA, Wilson IA, Deacon A
(2010)
Ligands in PSI structures.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1309-16 (Pub Med ID: 20944227)
Times cited: 5

Turnbaugh PJ, Henrissat B, Gordon JI
(2010)
Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1261-4 (Pub Med ID: 20944220)
Times cited: 0

Koonin EV
(2010)
New variants of known folds: do they bring new biology?
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1226-9 (Pub Med ID: 20944215)
Times cited: 1

Andreeva A, Murzin AG
(2010)
Structural classification of proteins and structural genomics: new insights into protein folding and evolution.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1190-7 (Pub Med ID: 20944210)
Times cited: 3

Bateman A, Coggill P, Finn RD
(2010)
DUFs: families in search of function.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1148-52 (Pub Med ID: 20944204)
Times cited: 3

Krishna SS, Weekes D, Bakolitsa C, Elsliger MA, Wilson IA, Godzik A, Wooley J
(2010)
TOPSAN: use of a collaborative environment for annotating, analyzing and disseminating data on JCSG and PSI structures.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1143-7 (Pub Med ID: 20944203)
Times cited: 26

Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wooley J, W�thrich K, Wilson IA
(2010)
The JCSG high-throughput structural biology pipeline.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66, 1137-42 (Pub Med ID: 20944202)
Times cited: 9

Weekes D, Krishna SS, Bakolitsa C, Wilson IA, Godzik A, Wooley J
(2010)
TOPSAN: a collaborative annotation environment for structural genomics.
BMC Bioinformatics, 11, 426 (Pub Med ID: 20716366)
Times cited: 6

Vila JA, Serrano P, W�thrich K, Scheraga HA
(2010)
Sequential nearest-neighbor effects on computed 13Calpha chemical shifts.
Journal of Biomolecular NMR, 48, 23-30 (Pub Med ID: 20644980)
Times cited: 2

Gonzalez R, Jennings LL, Knuth M, Orth AP, Klock HE, Ou W, Feuerhelm J, Hull MV, Koesema E, Wang Y, Zhang J, Wu C, Cho CY, Su AI, Batalov S, Chen H, Johnson K, Laffitte B, Nguyen DG, Snyder EY, Schultz PG, Harris JL, Lesley SA
(2010)
Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency.
Proceedings of the National Academy of Sciences of the United States of America, 107, 3552-7 (Pub Med ID: 20133595)
Times cited: 9

2009

Stanczak P, Horst R, Serrano P, W�thrich K.
(2009)
NMR characterization of membrane protein-detergent micelle solutions by use of microcoil equipment.
Journal of the American Chemical Society, 131, 18450-6 (Pub Med ID: 19950959)
Times cited: 2

van den Bedem H, Dhanik A, Latombe JC, Deacon AM
(2009)
Modeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers.
Acta Crystallographica Section D: Biological Crystallography, 65, 1107-17 (Pub Med ID: 19770508)
Times cited: 8

Han GW, Rife C, Sawaya MR
(2009)
Applications of bioinformatics to protein structures: how protein structure and bioinformatics overlap.
Methods in Molecular Biology, 569, 157-72 (Pub Med ID: 19623490)
Times cited: 0

Dessailly BH, Nair R, Jaroszewski L, Fajardo JE, Kouranov A, Lee D, Fiser A, Godzik A, Rost B, Orengo C
(2009)
PSI-2: structural genomics to cover protein domain family space.
Structure, 17, 869-81 (Pub Med ID: 19523904)
Times cited: 41

Columbus L, Lipfert J, Jambunathan K, Fox DA, Sim AY, Doniach S, Lesley SA
(2009)
Mixing and matching detergents for membrane protein NMR structure determination.
Journal of the American Chemical Society, 131, 7320-6 (Pub Med ID: 19425578)
Times cited: 16

Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, Dunbrack RL, Fidelis K, Fiser A, Godzik A, Huang YJ, Humblet C, Jacobson MP, Joachimiak A, Krystek SR, Kortemme T, Kryshtafovych A, Montelione GT, Moult J, Murray D, Sanchez R, Sosnick TR, Standley DM, Stouch T, Vajda S, Vasquez M, Westbrook JD, Wilson IA
(2009)
Outcome of a workshop on applications of protein models in biomedical research.
Structure, 17, 151-9 (Pub Med ID: 19217386)
Times cited: 24

Nair R, Liu J, Soong TT, Acton TB, Everett JK, Kouranov A, Fiser A, Godzik A, Jaroszewski L, Orengo C, Montelione GT, Rost B
(2009)
Structural genomics is the largest contributor of novel structural leverage.
Journal of Structural and Functional Genomics, 10, 181-91 (Pub Med ID: 19194785)
Times cited: 27

Klock HE, Lesley SA
(2009)
The Polymerase Incomplete Primer Extension (PIPE) method applied to high-throughput cloning and site-directed mutagenesis.
Methods in Molecular Biology, 498, 91-103 (Pub Med ID: 18988020)
Times cited: 11

2008

Soltis SM, Cohen AE, Deacon A, Eriksson T, Gonz�lez A, McPhillips S, Chui H, Dunten P, Hollenbeck M, Mathews I, Miller M, Moorhead P, Phizackerley RP, Smith C, Song J, van dem Bedem H, Ellis P, Kuhn P, McPhillips T, Sauter N, Sharp K, Tsyba I, Wolf G
(2008)
New paradigm for macromolecular crystallography experiments at SSRL: automated crystal screening and remote data collection.
Acta Crystallographica Section D: Biological Crystallography, 64, 1210-21 (Pub Med ID: 19018097)
Times cited: 21

Liu R, Freund Y, Spraggon G
(2008)
Image-based crystal detection: a machine-learning approach.
Acta Crystallographica Section D: Biological Crystallography, 64, 1187-95 (Pub Med ID: 19018095)
Times cited: 6

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A
(2008)
Genome pool strategy for structural coverage of protein families.
Structure, 16, 1659-67 (Pub Med ID: 19000818)
Times cited: 6

Hiller S, Wider G, W�thrich K
(2008)
APSY-NMR with proteins: practical aspects and backbone assignment.
Journal of Biomolecular NMR, 42, 179-95 (Pub Med ID: 18841481)
Times cited: 14

Billeter M, Wagner G, W�thrich K
(2008)
Solution NMR structure determination of proteins revisited.
Journal of Biomolecular NMR, 42, 155-8 (Pub Med ID: 18827972)
Times cited: 29

Fiorito F, Herrmann T, Damberger FF, W�thrich K
(2008)
Automated amino acid side-chain NMR assignment of proteins using (13)C- and (15)N-resolved 3D [ (1)H, (1)H]-NOESY.
Journal of Biomolecular NMR, 42, 23-33 (Pub Med ID: 18709333)
Times cited: 22

Volk J, Herrmann T, W�thrich K
(2008)
Automated sequence-specific protein NMR assignment using the memetic algorithm MATCH.
Journal of Biomolecular NMR, 41, 127-38 (Pub Med ID: 18512031)
Times cited: 24

Zhang Q, Horst R, Geralt M, Ma X, Hong WX, Finn MG, Stevens RC, W�thrich K
(2008)
Microscale NMR screening of new detergents for membrane protein structural biology.
Journal of the American Chemical Society, 130, 7357-63 (Pub Med ID: 18479092)
Times cited: 17

Structural Genomics Consortium; Architecture et Fonction des Macromol�cules Biologiques; Berkeley Structural Genomics Center; China Structural Genomics Consortium; Integrated Center for Structure and Function Innovation; Israel Structural Proteomics Center; Joint Center for Structural Genomics; Midwest Center for Structural Genomics; New York Structural GenomiX Research Center for Structural Genomics; Northeast Structural Genomics Consortium; Oxford Protein Production Facility; Protein Sample Production Facility, Max Delbr�ck Center for Molecular Medicine; RIKEN Structural Genomics/Proteomics Initiative; SPINE2-Complexes
(2008)
Protein production and purification.
Nature Methods, 5, 135-46 (Pub Med ID: 18235434)
Times cited: 75

Fox BG, Goulding C, Malkowski MG, Stewart L, Deacon A
(2008)
Structural genomics: from genes to structures with valuable materials and many questions in between.
Nature Methods, 5, 129-32 (Pub Med ID: 18235432) (PDB: )
Times cited: 14

Burley SK, Joachimiak A, Montelione GT, Wilson IA
(2008)
Contributions to the NIH-NIGMS Protein Structure Initiative from the PSI Production Centers
Structure, 16(1), 5-11 (Pub Med ID: 18184575)
Times cited: 28

Schwarzenbacher R, Godzik A, Jaroszewski L
(2008)
The JCSG MR pipeline: optimized alignments, multiple models and parallel searches.
Acta Crystallographica Section D: Biological Crystallography, 64(Pt 1), 133-40 (Pub Med ID: 18094477)
Times cited: 19

Klock HE, Koesema EJ, Knuth MW, Lesley SA
(2008)
Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts.
Proteins, 71(2), 982-94 (Pub Med ID: 18004753)
Times cited: 69

2007

Abola E, Carlton DD, Kuhn P, Stevens RC
(2007)
Five years of Increasing Structural Biology Throughput – A Retrospective Analysis.
Structure-based Drug Discovery, H. Jhoti and A. Leach, Eds., Springer (Netherlands)Structure-based Drug Discovery, H. Jhoti and A. Leach, Eds., Springer (Netherlands)
Times cited: no data

Miller MD, Deacon AM
(2007)
An X-ray microsource based system for crystal screening and beamline development during synchrotron shutdown periods.
Nuclear Instruments and Methods in Physics Research, Sec. A, 582, 233-235 (Pub Med ID: 19005562)
Times cited: 4

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A
(2007)
The challenge of protein structure determination--lessons from structural genomics.
Protein Science, 16(11), 2472-82 (Pub Med ID: 17962404)
Times cited: 32

Lipfert J, Columbus L, Chu VB, Lesley SA, Doniach S
(2007)
Size and shape of detergent micelles determined by small-angle X-ray scattering.
Journal of Physical Chemistry B, 111(43), 12427-38 (Pub Med ID: 17924686)
Times cited: 33

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A
(2007)
XtalPred: a web server for prediction of protein crystallizability.
Bioinformatics, 23(24), 3403-5 (Pub Med ID: 17921170)
Times cited: 38

Zhang Y, Stec B, Godzik A
(2007)
Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins.
Structure, 15, 1141-7 (Pub Med ID: 17850753)
Times cited: 23

Godzik A, Jambon M, Friedberg I
(2007)
Computational protein function prediction: are we making progress?
Cellular and Molecular Life Science, 64(19-20), 2505-11 (Pub Med ID: 17611711)
Times cited: 23

Rodrigues AP, Grant BJ, Godzik A, Friedberg I
(2007)
The 2006 automated function prediction meeting.
BMC Bioinformatics, 8 Suppl 4, S1-4 (Pub Med ID: 17570143)
Times cited: 3

Yooseph S, Sutton G, Rusch DB, Halpern AL, Williamson SJ, Remington K, Eisen JA, Heidelberg KB, Manning G, Li W, Jaroszewski L, Cieplak P, Miller CS, Li H, Mashiyama ST, Joachimiak MP, van Belle C, Chandonia JM, Soergel DA, Zhai Y, Natarajan K, Lee S, Raphael BJ, Bafna V, Friedman R, Brenner SE, Godzik A, Eisenberg D, Dixon JE, Taylor SS, Strausberg RL, Frazier M, Venter JC
(2007)
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families.
PLoS Biology, 5(3), e16 (Pub Med ID: 17355171)
Times cited: 265

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A
(2007)
Using an alignment of fragment strings for comparing protein structures.
Bioinformatics, 23(2), e219-24 (Pub Med ID: 17237095)
Times cited: 13

2006

Canaves JM
(2006)
Tools for Computational Protein Annotation and Functional Assignment
In Silico technology in drug target identification and validation, D. Le�n and S. Markel, Eds. New York; Marcel Dekker, IncIn Silico technology in drug target identification and validation, D. Le�n and S. Markel, Eds. New York; Marcel Dekker, Inc
Times cited: no data

Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A
(2006)
Representing and comparing protein structures as paths in three-dimensional space.
BMC Bioinformatics, 7(2), 460 (Pub Med ID: 17052359)
Times cited: 8

Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson B�, Agarwalla S
(2006)
Experimental and computational assessment of conditionally essential genes in Escherichia coli.
Journal of Bacteriology, 188(23), 8259-71 (Pub Med ID: 17012394)
Times cited: 60

Friedberg I, Jambon M, Godzik A
(2006)
New avenues in protein function prediction.
Protein Science, 15(6), 1527-9 (Pub Med ID: 16731984)
Times cited: 21

Columbus L, Lipfert J, Klock H, Millett I, Doniach S, Lesley SA
(2006)
Expression, purification, and characterization of Thermotoga maritima membrane proteins for structure determination.
Protein Science, 15(5), 961-75 (Pub Med ID: 16597824)
Times cited: 27

Etezady-Esfarjani T, Herrmann T, Horst R, W�thrich K
(2006)
Automated protein NMR structure determination in crude cell-extract.
Journal of Biomolecular NMR, 34(1), 3-11 (Pub Med ID: 16505959)
Times cited: 6

Chamberlain PP, Klock HE, McMullan D, DiDonato M, Kreusch A, Lesley SA, Spraggon G
(2006)
Advances in High-Throughput methods for crystallizing proteins
Biotechnology & Genetic Engineering Reviews, 23, 1-19
Times cited: no data

Zhang Z, Sauter NK, van den Bedem H, Snell G, Deacon AM
(2006)
Automated diffraction image analysis and spot searching for high-throughput crystal screening
Journal of Applied Crystallography, 39, 112-9
Times cited: 19

2005

Collins B, Stevens RC, Page R
(2005)
Crystallization Optimum Solubility Screening: using crystallization results to identify the optimal buffer for protein crystal formation.
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 61(Pt 12), 1035-8 (Pub Med ID: 16511228)
Times cited: 12

Peti W, Page R, Moy K, O'Neil-Johnson M, Wilson IA, Stevens RC, W�thrich K
(2005)
Towards miniaturization of a structural genomics pipeline using micro-expression and microcoil NMR.
Journal of Structural and Functional Genomics, 6(4), 259-67 (Pub Med ID: 16283429)
Times cited: 22

Page R, Deacon AM, Lesley SA, Stevens RC
(2005)
Shotgun crystallization strategy for structural genomics II: crystallization conditions that produce high resolution structures for T. maritima proteins.
Journal of Structural and Functional Genomics, 6(2-3), 209-17 (Pub Med ID: 16211521)
Times cited: 13

McMullan D, Canaves JM, Quijano K, Abdubek P, Nigoghossian E, Haugen J, Klock HE, Vincent J, Hale J, Paulsen J, Lesley SA
(2005)
High-throughput protein production for X-ray crystallography and use of size exclusion chromatography to validate or refute computational biological unit predictions.
Journal of Structural and Functional Genomics, 6(2-3), 135-41 (Pub Med ID: 16211510)
Times cited: 9

Klock HE, White A, Koesema E, Lesley SA
(2005)
Methods and results for semi-automated cloning using integrated robotics.
Journal of Structural and Functional Genomics, 6(2-3), 89-94 (Pub Med ID: 16211504)
Times cited: 20

Lesley SA, Wilson IA
(2005)
Protein production and crystallization at the Joint Center for Structural Genomics
Journal of Structural and Functional Genomics, 6(2-3), 71-9 (Pub Med ID: 16211502)
Times cited: 23

Jaroszewski L, Rychlewski L, Li Z, Li W, Godzik A
(2005)
FFAS03: a server for profile--profile sequence alignments.
Nucleic Acids Research, 33(Web Server issue), W284-8 (Pub Med ID: 15980471)
Times cited: 174

Page R, Peti W, Wilson IA, Stevens RC, W�thrich K
(2005)
NMR screening and crystal quality of bacterially expressed prokaryotic and eukaryotic proteins in a structural genomics pipeline.
Proceedings of the National Academy of Sciences of the United States of America, 102(6), 1901-5 (Pub Med ID: 15677718)
Times cited: 44

van den Bedem H, Lotan I, Latombe JC, Deacon AM
(2005)
Real-space protein-model completion: an inverse-kinematics approach.
Acta Crystallographica Section D: Biological Crystallography, 61(Pt 1), 2-13 (Pub Med ID: 15608370)
Times cited: 21

Carter DC, Rhodes P, McRee DE, Tari L, Dougan DR, Snell G, Abola E, Stevens RC
(2005)
Reduction in diffuse-convective disturbances in nanovolume protein crystallization experiments
Journal of Applied Crystallography, 38, 87-90
Times cited: 11

Snell EH, van der Woerd MJ, Miller MD, Deacon AM
(2005)
Finding a cold needle in a warm haystack: infrared imaging applied to locating crycocooled crystals in loops
Journal of Applied Crystallography, 38, 69-77
Times cited: 7

2004

Kreusch A, Lesley SA
(2004)
High Throughput Cloning, Expression and Purification Technologies
Genomics, Proteomics, and Vaccines, G. Grandi, Ed. West Sussex, England; John Wiley & Sons, Ltd.Genomics, Proteomics, and Vaccines, G. Grandi, Ed. West Sussex, England; John Wiley & Sons, Ltd.
Times cited: no data

Spraggon G, Pantazatos D, Klock HE, Wilson IA, Woods VL, Lesley SA
(2004)
On the use of DXMS to produce more crystallizable proteins: structures of the T. maritima proteins TM0160 and TM1171.
Protein Science, 13(12), 3187-99 (Pub Med ID: 15557262) (PDB: 1VJL)
Times cited: 25

Canaves JM, Page R, Wilson IA, Stevens RC
(2004)
Protein biophysical properties that correlate with crystallization success in Thermotoga maritima: maximum clustering strategy for structural genomics.
Journal of Molecular Biology, 344(4), 977-91 (Pub Med ID: 15544807)
Times cited: 50

Page R, Moy K, Sims EC, Velasquez J, McManus B, Grittini C, Clayton TL, Stevens RC
(2004)
Scalable high-throughput micro-expression device for recombinant proteins.
Biotechniques, 37(3), 364 (Pub Med ID: 15470889)
Times cited: 25

Xie J, Wang L, Wu N, Brock A, Spraggon G, Schultz PG
(2004)
The site-specific incorporation of p-iodo-L-phenylalanine into proteins for structure determination.
Nature Biotechnology, 22, 1297-301 (Pub Med ID: 15378068)
Times cited: 49

Page R, Stevens RC
(2004)
Crystallization data mining in structural genomics: using positive and negative results to optimize protein crystallization screens.
Methods, 34(3), 373-89 (Pub Med ID: 15325655)
Times cited: 36

DiDonato M, Deacon AM, Klock HE, McMullan D, Lesley SA
(2004)
A scaleable and integrated crystallization pipeline applied to mining the Thermotoga maritima proteome.
Journal of Structural and Functional Genomics, 5(1-2), 133-46 (Pub Med ID: 15263852)
Times cited: 19

Peti W, Etezady-Esfarjani T, Herrmann T, Klock HE, Lesley SA, W�thrich K
(2004)
NMR for structural proteomics of Thermotoga maritima: screening and structure determination.
Journal of Structural and Functional Genomics, 5(3), 205-15 (Pub Med ID: 15263836)
Times cited: 25

Ye Y, Godzik A
(2004)
Database searching by flexible protein structure alignment.
Protein Science, 13(7), 1841-50 (Pub Med ID: 15215527)
Times cited: 21

Schwarzenbacher R, Godzik A, Grzechnik SK, Jaroszewski L
(2004)
The importance of alignment accuracy for molecular replacement.
Acta Crystallographica Section D: Biological Crystallography, 60(Pt 7), 1229-36 (Pub Med ID: 15213384)
Times cited: 79

Canaves JM, Morse A, West B
(2004)
PCR primer selection tool optimized for high-throughput proteomics and structural genomics.
Biotechniques, 36(6), 1040-2 (Pub Med ID: 15211755)
Times cited: 1

Friedberg I, Jaroszewski L, Ye Y, Godzik A
(2004)
The interplay of fold recognition and experimental structure determination in structural genomics.
Current Opinion in Structural Biology, 14(3), 307-12 (Pub Med ID: 15193310)
Times cited: 29

Snell G, Cork C, Nordmeyer R, Cornell E, Meigs G, Yegian D, Jaklevic J, Jin J, Stevens RC, Earnest T
(2004)
Automated sample mounting and alignment system for biological crystallography at a synchrotron source.
Structure, 12(4), 537-45 (Pub Med ID: 15062077)
Times cited: 51

Stevens RC
(2004)
Long live structural biology.
Nature Structural & Molecular Biology, 11(4), 293-5 (Pub Med ID: 15048098)
Times cited: 17

Ye Y, Godzik A
(2004)
Comparative analysis of protein domain organization.
Genome Research, 14(3), 343-53 (Pub Med ID: 14993202)
Times cited: 46

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A, Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J
(2004)
The status of structural genomics defined through the analysis of current targets and structures.
Pac Symp Biocomput., 9, 375-86 (Pub Med ID: 14992518)
Times cited: 6

Pantazatos D, Kim JS, Klock HE, Stevens RC, Wilson IA, Lesley SA, Woods VL
(2004)
Rapid refinement of crystallographic protein construct definition employing enhanced hydrogen/deuterium exchange MS.
Proceedings of the National Academy of Sciences of the United States of America, 101(3), 751-6 (Pub Med ID: 14715906)
Times cited: 63

Bern M, Goldberg D, Stevens RC, Kuhn P
(2004)
Automatic classification of protein crystallization images using a curve tracking algorithm
Journal of Applied Crystallography, 37, 279-287
Times cited: 28

2003

Stevens RC
(2003)
The cost and value of three-dimensional protein structure
Drug Discovery World, 4, 35-48
Times cited: no data

Weselak M, Patch MG, Selby TL, Knebel G, Stevens RC
(2003)
Robotics for automated crystal formation and analysis.
Methods in Enzymology, 368(Pt 6), 45-76 (Pub Med ID: 14674268)
Times cited: 14

Ye Y, Godzik A
(2003)
Flexible structure alignment by chaining aligned fragment pairs allowing twists.
Bioinformatics, 19 Suppl 2(20), ii246-55 (Pub Med ID: 14534198)
Times cited: 127

Liu T, Rojas A, Ye Y, Godzik A
(2003)
Homology modeling provides insights into the binding mode of the PAAD/DAPIN/pyrin domain, a fourth member of the CARD/DD/DED domain family.
Protein Science, 12(9), 1872-81 (Pub Med ID: 12930987)
Times cited: 22

Page R, Grzechnik SK, Canaves JM, Spraggon G, Kreusch A, Kuhn P, Stevens RC, Lesley SA
(2003)
Shotgun crystallization strategy for structural genomics: an optimized two-tiered crystallization screen against the Thermotoga maritima proteome.
Acta Crystallographica Section D: Biological Crystallography, 59(Pt 6), 1028-37 (Pub Med ID: 12777766)
Times cited: 67

Hosfield D, Palan J, Hilgers M, Scheibe D, McRee DE, Stevens RC
(2003)
A fully integrated protein crystallization platform for small-molecule drug discovery.
Journal of Structural Biology, 142(1), 207-17 (Pub Med ID: 12718932)
Times cited: 48

Godzik A, Canaves J, Grzechnik S, Jaroszewski L, Morse A, Ouyang J, Wang X, West B, Wooley J.
(2003)
Challenges of structural genomics: bioinformatics
Biosilico, 1, 36-41
Times cited: no data

2002

Selby TL, Stevens RC
(2002)
Bioinformatics and High-throughput Protein Production for Structural Genomics
Gene Cloning and ex-pression Technologies, M.P. Weiner and Q. Lu, Eds. Westborough, MA; Biotechniques PressGene Cloning and ex-pression Technologies, M.P. Weiner and Q. Lu, Eds. Westborough, MA; Biotechniques Press
Times cited: no data

Chiu HJ, McPhillips T, McPhillips S, Sharp K, Eriksson T, Sauter N, Soltis M, Kuhn P
(2002)
Collaboratory for Macromolecular Crystallography at SSRL
Proceedings in Network LearningProceedings in Network Learning
Times cited: no data

Kuhn P, Wilson K, Patch MG, Stevens RC
(2002)
The genesis of high-throughput structure-based drug discovery using protein crystallography.
Current Opinion in Chemical Biology, 6(5), 704-10 (Pub Med ID: 12413557)
Times cited: 72

McPhillips TM, McPhillips SE, Chiu HJ, Cohen AE, Deacon AM, Ellis PJ, Garman E, Gonzalez A, Sauter NK, Phizackerley RP, Soltis SM, Kuhn P
(2002)
Blu-Ice and the Distributed Control System: software for data acquisition and instrument control at macromolecular crystallography beamlines.
Journal of Synchrotron Radiation, 9(Pt 6), 401-6 (Pub Med ID: 12409628)
Times cited: 214

Spraggon G, Lesley SA, Kreusch A, Priestle JP
(2002)
Computational analysis of crystallization trials.
Acta Crystallographica Section D: Biological Crystallography, 58(Pt 11), 1915-23 (Pub Med ID: 12393922)
Times cited: 46

Lesley SA, Kuhn P, Godzik A, Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC
(2002)
Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline.
Proceedings of the National Academy of Sciences of the United States of America, 99(18), 11664-9 (Pub Med ID: 12193646)
Times cited: 284

Lesley SA, Graziano J, Cho CY, Knuth MW, Klock HE
(2002)
Gene expression response to misfolded protein as a screen for soluble recombinant protein.
Protein Engineering, Design and Selection, 15(2), 153-60 (Pub Med ID: 11917152)
Times cited: 56

Santarsiero BD, Yegian DT, Lee CC, Spraggon G, Gu J, Scheibe D, Uber DC, Cornell EW, Nordmeyer RA, Kolbe WF, Jin J, Jones AL, Jaklevik JM, Schultz PG, Stevens RC
(2002)
An approach to rapid protein crystallization using nanodroplets
Journal of Applied Crystallography, 35, 278-281
Times cited: 170

Cohen AE, Ellis PJ, Miller MD, Deacon AM, Phizacherley RP
(2002)
An automated system to mount cryo-cooled protein crystals on a synchtrotron beam line, using compact sample cassettes and a small-scale robot
Journal of Applied Crystallography, 35, 720-6
Times cited: 125

2001

Stevens RC, Yokoyama S, Wilson IA
(2001)
Global efforts in structural genomics.
Science, 294(5540), 89-92 (Pub Med ID: 11588249)
Times cited: 131

Stevens RC, Wilson IA
(2001)
Tech.Sight. Industrializing structural biology.
Science, 293(5529), 519-20 (Pub Med ID: 11463918)
Times cited: 27

Lesley SA
(2001)
High-throughput proteomics: protein expression and purification in the postgenomic world.
Protein Expression and Purification, 22(2), 159-64 (Pub Med ID: 11437590)
Times cited: 97

Goodwill KE, Tennant MG, Stevens RC
(2001)
High-throughput X-ray crystallography for structure-based drug design
Drug Discovery Today, 6, S113-8
Times cited: 16

2000

Erlandsen H, Abola EE, Stevens RC
(2000)
Combining structural genomics and enzymology: completing the picture in metabolic pathways and enzyme active sites.
Current Opinion in Structural Biology, 10(6), 719-30 (Pub Med ID: 11114510)
Times cited: 31

Abola E, Kuhn P, Earnest T, Stevens RC
(2000)
Automation of X-ray crystallography.
Nature Structural & Molecular Biology, 7 Suppl(20), 973-7 (Pub Med ID: 11104004)
Times cited: 116

Stevens RC
(2000)
High-throughput protein crystallization.
Current Opinion in Structural Biology, 10(5), 558-63 (Pub Med ID: 11042454)
Times cited: 132

Stevens RC
(2000)
Design of high-throughput methods of protein production for structural biology.
Structure, 8(9), R177-85 (Pub Med ID: 10986469)
Times cited: 110

Total number of citations for methodological publications: 3953
Average number of citations per publication (methodological): 35.6

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