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YP_390128.1;FM11964A |
Protein Sequence Comparative Analysis (PSCA) | |
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YP_390128.1 FM11964A JCSG 377310 PDB Deposition 08-FEB-13 PDB id: 3c8v Protein Sequence Information 
TOPSAN
JCSG Internal annotations
SEQUENCE amino acids 477 aa >YP_390128.1 gi|78358679|ref|YP_390128.1| hypothetical protein Dde_3640 [Desulfovibrio desulfuricans G20] MTQLELLLERIIDRVNVNLRHQKFDVGDYVRRQTPHLHYSKFYAFYGLSADDPVHFHFKN SSLAGSYLLGRVNVLHSALYKSDIRGDELKRKGQHFVCDGKMIPLHDDEVITIKDSFLNK TLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVRYFSY VQTGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAGSCPTGVLMEFVEVRQE DFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQE NCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTII DLEEPLEIPAGHLVWGYIRNKADLAAHSISFEEFAKVDGEVTMGRMTFRGKGGPFLDSFK KRIKRILSENGAFFDGSEGTGHAQKGKNFTFNIIQPYQDGDPRGMYPTILIQPNNGS CDS cDNA 1434 bp 1 atgacgcagc tggaattgct tctggagcgc atcattgacc gggtgaacgt caaccttcgc 60 61 catcagaagt ttgacgtggg cgactacgtg cgccggcaga cgccgcacct gcattactcg 120 121 aagttctatg cattctacgg cctttcggcc gatgaccccg tgcatttcca cttcaagaac 180 181 tcgagtcttg ccggcagcta cttactgggc cgtgtcaacg tgctgcattc tgcgttgtac 240 241 aagagcgata tccgcggtga cgaactgaag cgcaagggtc agcattttgt ctgcgacggc 300 301 aagatgattc ctctgcatga cgacgaggtc atcaccatca aggacagctt tctgaacaag 360 361 acgctggtgc attccaactc gcacgatccg gaatcgccgg aagagttcac catccgcaac 420 421 accgtggcca tgccttatgc aaacatccac ggttcgctta cggaaggcag cttcatcggg 480 481 tcctttgcca cggtggacct ttccaccatc cacaacagcg tggtgcgcta cttctcgtat 540 541 gtgcagacag gcgaactggt gggcaaatgc gtggaacccg gacagatatg gataaagagc 600 601 ggtgatgagc tggagttcca ctacagcttt gataaagcca ttcttgacaa gtacatatcg 660 661 caggaagccg gttcctgccc cacaggcgtc ctcatggagt ttgtggaagt gcggcaggag 720 721 gatttcgagg aggtctttgc ctcgggtcat atggccagcg gcgccggttc ggcttccggt 780 781 gcgtccgtca gcggatatgc cgtcataaaa ggcgacaccg tcatcggcga aaatgtgctg 840 841 gtgtcacagc gcgcctatct ggataacgca tggatgggca agggcagcaa cgcgcaggaa 900 901 aactgctaca tcatcaacag ccgtctggaa cgcaactgcg tcactgccca cggcggaaag 960 961 atcatcaacg cgcatctggg cgacatgatc ttcaccgggt tcaactcgtt cctgcagggc 1020 1021 agcgaaagca gtccgctgaa aatcggtgac ggatgcgtgg tcatgccgca caccatcatc 1080 1081 gatctggaag agccgctgga aattccggcc ggtcaccttg tgtggggata tatccgcaac 1140 1141 aaggccgatc tggctgccca ttccatcagc tttgaagagt ttgccaaagt ggacggtgaa 1200 1201 gtgaccatgg gtcgtatgac cttccgcggc aagggcggcc cgttccttga ttccttcaaa 1260 1261 aagcgcatca aacgtattct cagcgaaaac ggtgcatttt ttgatggcag cgaaggcaca 1320 1321 ggacacgcac agaagggtaa gaacttcacg ttcaacatca tccagcccta tcaggacggt 1380 1381 gacccgcgcg gcatgtatcc gaccattctc attcagccca acaacggctc ctag 1434Target constructs Download sequence in PIR or FASTA format Chemical properties of sequence with tag
Notes The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951). Protein sequence information contains the annotation contents from both of JCSG and SWISS-PROT. The SWISS-PROT/TrEMBL annotation is accessed from SWALL(SPTR) on the EBI SRS server. PDB homologes show both identical and highly similar proteins with released date and protein function. |
