||Protein Sequence Comparative Analysis (PSCA)|
TM1244 TM1244 JCSG 283109 PDB Deposition 04-DEC-15 PDB id: 1vq3|
Protein Sequence Information
JCSG Internal annotations
SEQUENCE amino acids 82 aa >TM1244 TM1244 conserved hypothetical protein MPLFKFAIDVQYRSNVRDPRGETIERVLREEKGLPVKKLRLGKSIHLEVEAENKEKAYEI VKKACEELLVNPVVEEYEVREL CDS cDNA 246 bp 1 ttgccgctct ttaaattcgc aatagacgtt cagtacagga gcaacgtgag ggatccgcgc 60 61 ggagaaacga tcgaacgtgt tctgagggaa gaaaaaggtc ttcccgtgaa aaagttgaga 120 121 cttgggaagt ccatccacct cgaagtagaa gcagaaaaca aagaaaaagc gtacgaaatc 180 181 gtaaagaaag cctgcgaaga actcctggtg aacccggttg ttgaggaata tgaggtgagg 240 241 gagctg 246Warning: the change of start codon from ATG/M to TTG/L;
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Chemical properties of sequence with tag
The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951).
Protein sequence information contains the annotation contents from both of JCSG and SWISS-PROT. The SWISS-PROT/TrEMBL annotation is accessed from SWALL(SPTR) on the EBI SRS server. PDB homologes show both identical and highly similar proteins with released date and protein function.