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   ZP_02063319.1;SP13221C
Protein Sequence Comparative Analysis   (PSCA)
 
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ZP_02063319.1    REFERENCE SYSTEM

Accession: ZP_02063319.1
Description: gi|160882316|ref|ZP_02063319.1| hypothetical protein BACOVA_00264 [Bacteroides ovatus ATCC 8483]
Organism: Bacteroides ovatus
Keyword: gi|160882316|ref|ZP_02063319.1| hypothetical protein BACOVA_00264 [Bacteroides ovatus ATCC 8483]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:3.0e-14
    Pfam:v3_1_0:1uadC00   0;  PMID:;
2.          trusted          evalue:2.4e-13
    Pfam:v3_1_0:1rwiA00   0;  PMID:;
3.          trusted          evalue:9.5e-12
    Pfam:v3_1_0:1pjxA00   0;  PMID:;
4.          trusted          evalue:5.1e-11
    Pfam:v3_1_0:1l0qA01   0;  PMID:;
5.          trusted          evalue:6.5e-11
    Pfam:v3_1_0:1d3cA03   0;  PMID:;
6.          trusted          evalue:1.3e-06
    Pfam:PF01833   IPT/TIG domain;  PMID:10390613,10222208;
7.          trusted          evalue:1.0e-09
    Pfam:v3_1_0:1q7fB00   0;  PMID:;
8.          trusted          evalue:5.9e-08
    Pfam:v3_1_0:1c5kA02   0;  PMID:;
9.          trusted          evalue:3.7e-04
    Pfam:PF01436   NHL repeat;  PMID:9868369,1894599,7778269;
10.          trusted          evalue:1.1e-06
    Pfam:v3_1_0:1npeA00   0;  PMID:;
11.          trusted          evalue:1.2e-05
    Pfam:v3_1_0:1pbyB00   0;  PMID:;
12.          trusted          evalue:2.5e-05
    Pfam:v3_1_0:1ijqA01   0;  PMID:;
13.          trusted          evalue:5.0e-05
    Pfam:v3_1_0:1k32A02   0;  PMID:;
14.          trusted          evalue:7.0e-05
    Pfam:v3_1_0:1k32A01   0;  PMID:;
15.          trusted          evalue:2.3e-04
    Pfam:v3_1_0:1ttuA03   0;  PMID:;
16.          trusted          evalue:2.8e-04
    Pfam:v3_1_0:1v04A00   0;  PMID:;
17.          trusted          evalue:1.2e-03
    Pfam:v3_1_0:1jmxB00   0;  PMID:;
18.          trusted          evalue:1.7e-03
    Pfam:v3_1_0:1cruA00   0;  PMID:;
19.          trusted          evalue:2.3e-03
    Pfam:v3_1_0:1ri6A00   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          33          465          100          92.90          0.0e+00
     Pdb:4HW6 CRYSTAL STRUCTURE OF AN AUXILIARY NUTRIENT BINDING PROTEIN (; PMID:;
2.          39          465          45          91.61          1.0e-110
     Pdb:3TC9 CRYSTAL STRUCTURE OF AN AUXILIARY NUTRIENT BINDING PROTEIN (; PMID:;
3.          37          465          33          92.04          4.0e-54
     Pdb:3KYA CRYSTAL STRUCTURE OF PUTATIVE PHOSPHATASE (NP_812416.1) FROM; PMID:;
4.          37          148          33          23.87          2.0e-07
     Pdb:3HRP CRYSTAL STRUCTURE OF STRUCTURAL GENOMICS PROTEIN OF UNKNOWN ; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

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