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   ZP_02040096.1;SP17422C
Protein Sequence Comparative Analysis   (PSCA)
 
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ZP_02040096.1    REFERENCE SYSTEM

Accession: ZP_02040096.1
Description: gi|154503036|ref|ZP_02040096.1| hypothetical protein RUMGNA_00858 [Ruminococcus gnavus ATCC 29149]
Organism: Ruminococcus gnavus ATCC 29149
Keyword: gi|154503036|ref|ZP_02040096.1| hypothetical protein RUMGNA_00858 [Ruminococcus gnavus ATCC 29149]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:1.0e-110
    Pfam:PF03180   NLPA lipoprotein;  PMID:8406866,3003106;
2.          trusted          evalue:4.3e-53
    Pfam:v3_1_0:1xs5A01   0;  PMID:;
3.          trusted          evalue:6.1e-50
    Pfam:v3_1_0:1p99A01   0;  PMID:;
4.          trusted          evalue:2.5e-39
    Pfam:v3_1_0:1p99A02   0;  PMID:;
5.          trusted          evalue:2.8e-03
    Pfam:v3_1_0:1wdnA01   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          28          278          100          89.93          0.0e+00
     Pdb:4IB2 CRYSTAL STRUCTURE OF A PUTATIVE LIPOPROTEIN (RUMGNA_00858) F; PMID:;
2.          36          276          48          86.33          2.0e-58
     Pdb:4K3F CRYSTAL STRUCTURE OF A PUTATIVE TONB-DEPENDENT RECEPTOR (PA5; PMID:;
3.          38          275          45          85.25          5.0e-51
     Pdb:4QHQ THE STRUCTURE OF A NUTRIENT BINDING PROTEIN FROM BURKHOLDERI; PMID:;
4.          37          272          40          84.53          4.0e-49
     Pdb:1XS5 THE CRYSTAL STRUCTURE OF LIPOPROTEIN TP32 FROM TREPONEMA PAL; PMID:;
5.          35          276          43          86.69          1.0e-47
     Pdb:4EF1 CRYSTAL STRUCTURE OF A PHEROMONE COB1 PRECURSOR/LIPOPROTEIN,; PMID:;
     Pdb:4EF2 CRYSTAL STRUCTURE OF A PHEROMONE COB1 PRECURSOR/LIPOPROTEIN,; PMID:;
6.          37          276          43          85.97          1.0e-45
     Pdb:4GOT CRYSTAL STRUCTURE OF A PUTATIVE METHIONINE-BINDING LIPOPROTE; PMID:;
7.          18          275          40          92.45          2.0e-44
     Pdb:4YAH CRYSTAL STRUCTURE OF THE METHIONINE BINDING PROTEIN, METQ ; PMID:;
8.          39          276          38          85.25          1.0e-42
     Pdb:3TQW STRUCTURE OF A ABC TRANSPORTER, PERIPLASMIC SUBSTRATE-BINDIN; PMID:;
9.          31          276          38          88.13          5.0e-41
     Pdb:3UP9 CRYSTAL STRUCTURE OF A PUTATIVE LIPOPROTEIN (ACTODO_00931) F; PMID:;
10.          51          276          39          80.94          9.0e-39
     Pdb:3IR1 CRYSTAL STRUCTURE OF LIPOPROTEIN GNA1946 FROM NEISSERIA MENI; PMID:;
11.          51          276          39          80.94          1.0e-38
     Pdb:3GXA CRYSTAL STRUCTURE OF GNA1946 ; PMID:;
12.          34          276          35          87.05          1.0e-35
     Pdb:4OTE CRYSTAL STRUCTURE OF A PUTATIVE LIPOPROTEIN (CD630_1653) FRO; PMID:;
13.          61          262          39          72.30          3.0e-34
     Pdb:3K2D CRYSTAL STRUCTURE OF IMMUNOGENIC LIPOPROTEIN A FROM VIBRIO V; PMID:;
14.          31          276          37          88.13          3.0e-34
     Pdb:4NTL CRYSTAL STRUCTURE OF A LIPOPROTEIN, YAEC FAMILY (EF3198) FRO; PMID:;
15.          16          242          36          81.29          7.0e-31
     Pdb:1P99 1.7A CRYSTAL STRUCTURE OF PROTEIN PG110 FROM STAPHYLOCOCCUS ; PMID:;
16.          38          243          36          73.74          3.0e-30
     Pdb:4Q5T CRYSTAL STRUCTURE OF AN ATMB (PUTATIVE MEMBRANE LIPOPROTEIN); PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
 

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