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   ZP_02032405.1;SP13677A
Protein Sequence Comparative Analysis   (PSCA)
 
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ZP_02032405.1    REFERENCE SYSTEM

Accession: ZP_02032405.1
Description: gi|154492779|ref|ZP_02032405.1| hypothetical protein PARMER_02418 [Parabacteroides merdae ATCC 43184]
Organism: Parabacteroides merdae
Keyword: gi|154492779|ref|ZP_02032405.1| hypothetical protein PARMER_02418 [Parabacteroides merdae ATCC 43184]

  

References           
PMID Filter
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     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:1.9e-17
    Pfam:v3_1_0:1t0bA00   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          24          304          99          92.11          0.0e+00
     Pdb:4E5V CRYSTAL STRUCTURE OF A PUTATIVE THUA-LIKE PROTEIN (PARMER_02; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          24          299          51          90.46          2.0e-81
2.          11          298          47          94.41          1.0e-75
     gi|87288440|gb|EAQ80335.1| hypothetical protein DSM3645_1;  PMID:;
     gi|87308729|ref|ZP_01090868.1| hypothetical protein DSM3645_1;  PMID:;
3.          15          299          43          93.42          7.0e-69
     gi|32443795|emb|CAD73237.1| conserved hypothetical protein;  PMID:12835416;
     gi|32472559|ref|NP_865553.1| hypothetical protein RB3509 [R;  PMID:12835416;
4.          26          298          40          89.47          1.0e-63
     gi|88710460|gb|EAR02692.1| hypothetical protein FB2170_05;  PMID:;
     gi|88711519|ref|ZP_01105607.1| hypothetical protein FB2170_05;  PMID:;
5.          14          282          42          88.16          2.0e-62
     gi|32396996|emb|CAD72299.1| conserved hypothetical protein;  PMID:;
     gi|32471625|ref|NP_864618.1| hypothetical protein RB1854 [R;  PMID:;
6.          18          299          39          92.43          2.0e-61
     gi|88806650|ref|ZP_01122167.1| hypothetical protein RB2501_01;  PMID:;
     gi|88783482|gb|EAR14654.1| hypothetical protein RB2501_01;  PMID:;
7.          26          298          36          89.47          5.0e-51
     gi|86132490|ref|ZP_01051084.1| hypothetical protein MED134_11;  PMID:;
     gi|85817051|gb|EAQ38235.1| hypothetical protein MED134_11;  PMID:17215843;
8.          5          282          34          91.12          6.0e-43
9.          1          288          34          94.41          3.0e-37
10.          19          277          30          84.87          6.0e-19
     gi|87286617|gb|EAQ78523.1| putative large multi-functiona;  PMID:;
     gi|87310636|ref|ZP_01092764.1| putative large multi-functiona;  PMID:;
11.          58          277          29          72.04          4.0e-08
     gi|29605762|dbj|BAC69827.1| putative glycosyl hydrolase [S;  PMID:;
     gi|29828658|ref|NP_823292.1| glycosyl hydrolase [Streptomyc;  PMID:;
12.          9          276          24          87.83          3.0e-07
     gi|87311973|ref|ZP_01094083.1| hypothetical protein DSM3645_1;  PMID:;
     gi|87285335|gb|EAQ77259.1| hypothetical protein DSM3645_1;  PMID:;
13.          167          277          31          36.18          8.0e-06
     gi|32476304|ref|NP_869298.1| hypothetical protein RB10195 [;  PMID:12835416;
     gi|32446849|emb|CAD78755.1| conserved hypothetical protein;  PMID:12835416;
14.          87          281          27          63.82          2.0e-05
     gi|21224873|ref|NP_630652.1| glycosyl hydrolase (secreted p;  PMID:12000953,8843436;
     gi|7479494|pir||T34929 hypothetical protein SC3F9.07 ;  PMID:;
     gi|3218378|emb|CAA19630.1| putative glycosyl hydrolase (p;  PMID:12000953;
15.          23          277          25          83.55          2.0e-04
16.          78          277          24          65.46          2.0e-04
     gi|8546922|emb|CAB94634.1| putative secreted glycosyl hyd;  PMID:;
     gi|21225488|ref|NP_631267.1| secreted glycosyl hydrolase [S;  PMID:;
17.          78          261          24          60.20          2.0e-04
     gi|88806501|ref|ZP_01122018.1| putative secreted glycosyl hyd;  PMID:;
     gi|88783333|gb|EAR14505.1| putative secreted glycosyl hyd;  PMID:;
18.          78          277          22          65.46          3.0e-04
     gi|105893259|gb|ABF76424.1| conserved hypothetical protein;  PMID:;
19.          78          280          26          66.45          4.0e-04
     gi|21244710|ref|NP_644292.1| hypothetical protein XAC3992 [;  PMID:;
     gi|21110401|gb|AAM38828.1| conserved hypothetical protein;  PMID:;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

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