LOADING...
   ZP_02030716.1;SP16962B
Protein Sequence Comparative Analysis   (PSCA)
 
  Back to Target List
 

ZP_02030716.1    REFERENCE SYSTEM

Accession: ZP_02030716.1
Description: gi|154490775|ref|ZP_02030716.1| hypothetical protein PARMER_00689 [Parabacteroides merdae ATCC 43184]
Organism: Parabacteroides merdae
Keyword: gi|154490775|ref|ZP_02030716.1| hypothetical protein PARMER_00689 [Parabacteroides merdae ATCC 43184]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:1.2e-25
    Pfam:v3_1_0:1ivnA00   0;  PMID:;
2.          trusted          evalue:1.1e-25
    Pfam:v3_1_0:1z8hA00   0;  PMID:;
3.          trusted          evalue:2.6e-23
    Pfam:v3_1_0:1es9A00   0;  PMID:;
4.          trusted          evalue:4.4e-07
    Pfam:PF00657   GDSL-like Lipase/Acylhydrolase;  PMID:7610479;
5.          trusted          evalue:1.0e-04
    Pfam:v3_1_0:1k7cA00   0;  PMID:;
6.          trusted          evalue:8.5e-05
    Pfam:v3_1_0:1esc000   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          28          256          99          89.06          0.0e+00
     Pdb:4Q9A CRYSTAL STRUCTURE OF A PUTATIVE GDSL-LIKE LIPASE (PARMER_006; PMID:;
2.          49          256          33          80.86          2.0e-25
     Pdb:4OAP AN AXE2 MUTANT (W190I), AN ACETYL-XYLOOLIGOSACCHARIDE ESTERA; PMID:;
3.          49          256          34          80.86          5.0e-25
     Pdb:4JHL CRYSTAL STRUCTURE OF OF AXE2, AN ACETYLXYLAN ESTERASE FROM G; PMID:;
     Pdb:3W7V CRYSTAL STRUCTURE OF AXE2, AN ACETYLXYLAN ESTERASE FROM GEOB; PMID:;
4.          49          256          34          80.86          9.0e-25
     Pdb:4JJ4 CRYSTAL STRUCTURE OF A CATALYTIC MUTANT OF AXE2 (AXE2-D191A); PMID:;
5.          49          256          34          80.86          1.0e-24
     Pdb:4JKO CRYSTAL STRUCTURE OF A CATALYTIC MUTANT OF AXE2 (AXE2_S15A),; PMID:;
6.          49          256          34          80.86          1.0e-24
     Pdb:4OAO A MUTANT OF AXE2 (R55A), AND ACETYL-XYLOOLIGOSACCHARIDE ESTE; PMID:;
7.          49          256          34          80.86          6.0e-24
     Pdb:4JJ6 CRYSTAL STRUCTURE OF A CATALYTIC MUTANT OF AXE2 (AXE2-H194A); PMID:;
8.          49          255          30          80.47          1.0e-18
     Pdb:3RJT CRYSTAL STRUCTURE OF LIPOLYTIC PROTEIN G-D-S-L FAMILY FROM A; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          49          252          36          79.30          2.0e-27
     gi|69247322|ref|ZP_00604304.1| Lipolytic enzyme, G-D-S-L [Ent;  PMID:;
     gi|68194892|gb|EAN09363.1| Lipolytic enzyme, G-D-S-L [Ent;  PMID:;
2.          41          252          34          82.42          2.0e-27
     gi|71360912|emb|CAH05122.1| hypothetical protein [Streptom;  PMID:;
3.          43          254          34          82.42          2.0e-26
     gi|82402091|gb|EAP42878.1| conserved hypothetical protein;  PMID:;
     gi|82499889|ref|ZP_00885323.1| conserved hypothetical protein;  PMID:;
4.          49          253          36          79.69          2.0e-25
     gi|47094720|ref|ZP_00232335.1| lipase/acylhydrolase family pr;  PMID:;
     gi|47016860|gb|EAL07778.1| lipase/acylhydrolase family pr;  PMID:;
     gi|16802537|ref|NP_464022.1| hypothetical protein lmo0494 [;  PMID:11679669;
     gi|25376267|pir||AG1136 esterase homolog lmo0494 [impo;  PMID:11679669;
     gi|16409870|emb|CAC98573.1| lmo0494 [Listeria monocytogene;  PMID:11679669;
5.          3          134          46          51.17          2.0e-24
     gi|84579774|dbj|BAE72468.1| RNA dependent RNA polymerase [;  PMID:;
6.          49          253          34          79.69          5.0e-24
     gi|46906740|ref|YP_013129.1| lipase/acylhydrolase family pr;  PMID:;
     gi|47018492|gb|EAL09249.1| lipase/acylhydrolase family pr;  PMID:;
     gi|46880005|gb|AAT03306.1| lipase/acylhydrolase family pr;  PMID:;
     gi|47093119|ref|ZP_00230895.1| lipase/acylhydrolase family pr;  PMID:;
7.          49          253          34          79.69          5.0e-23
     gi|16412935|emb|CAC95727.1| lin0495 [Listeria innocua] ;  PMID:11679669;
     gi|25376268|pir||AG1494 weakly esterase homolog lin049;  PMID:11679669;
     gi|16799570|ref|NP_469838.1| hypothetical protein lin0495 [;  PMID:11679669;
8.          49          255          33          80.47          5.0e-21
     gi|89095852|ref|ZP_01168746.1| hypothetical protein B14911_03;  PMID:;
     gi|89089598|gb|EAR68705.1| hypothetical protein B14911_03;  PMID:;
9.          41          252          31          82.42          3.0e-20
     gi|25376266|pir||A99487 hypothetical protein SSO3052 [;  PMID:;
     gi|13816454|gb|AAK43152.1| Hypothetical protein SSO3052 [;  PMID:11427726;
     gi|15899757|ref|NP_344362.1| hypothetical protein SSO3052 [;  PMID:11427726;
10.          50          252          29          78.91          6.0e-16
     gi|88776403|gb|EAR07623.1| lipase/acylhydrolase family pr;  PMID:;
     gi|88800830|ref|ZP_01116385.1| lipase/acylhydrolase family pr;  PMID:;
11.          49          250          30          78.52          2.0e-15
12.          50          254          23          79.69          2.0e-06
     gi|29341413|gb|AAO79201.1| conserved hypothetical protein;  PMID:;
     gi|29349504|ref|NP_813007.1| hypothetical protein BT4096 [B;  PMID:;
13.          89          236          27          57.42          4.0e-04
     gi|47569073|ref|ZP_00239762.1| platelet activating factor, pu;  PMID:;
     gi|47554235|gb|EAL12597.1| platelet activating factor, pu;  PMID:;
14.          49          247          24          77.34          7.0e-04
     gi|47018393|gb|EAL09154.1| lipase/acylhydrolase, putative;  PMID:;
     gi|47093261|ref|ZP_00231033.1| lipase/acylhydrolase, putative;  PMID:;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

Contact Webmaster JCSG Menu