LOADING...
   YP_098753.1;SP13297E
Protein Sequence Comparative Analysis   (PSCA)
 
  Back to Target List
 

YP_098753.1    REFERENCE SYSTEM

Accession: YP_098753.1
Description: gi|53712761|ref|YP_098753.1| hypothetical protein BF1468 [Bacteroides fragilis YCH46]
Organism: Bacteroides fragilis YCH46
Keyword: gi|53712761|ref|YP_098753.1| hypothetical protein BF1468 [Bacteroides fragilis YCH46]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:6.9e-70
    Pfam:0000.0002037   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          21          130          99          83.85          1.0e-57
     Pdb:4OUQ CRYSTAL STRUCTURE OF A DUF4783 FAMILY PROTEIN (BF1468) FROM ; PMID:;
2.          21          130          70          83.85          5.0e-43
     Pdb:4Q53 CRYSTAL STRUCTURE OF A DUF4783 FAMILY PROTEIN (BACUNI_04292); PMID:;
3.          21          130          67          83.85          3.0e-41
     Pdb:4ORL CRYSTAL STRUCTURE OF A DUF4783 FAMILY PROTEIN (BACOVA_04304); PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          130          100          99.23          1.0e-67
     gi|53712761|ref|YP_098753.1| hypothetical protein BF1468 [B;  PMID:15466707;
     gi|52215626|dbj|BAD48219.1| conserved hypothetical protein;  PMID:15466707;
     gi|60680911|ref|YP_211055.1| hypothetical protein BF1399 [B;  PMID:15746427;
     gi|60492345|emb|CAH07111.1| conserved hypothetical exporte;  PMID:15746427;
2.          1          130          61          99.23          5.0e-42
     gi|29338869|gb|AAO76668.1| hypothetical protein BT_1561 [;  PMID:12663928;
     gi|29346971|ref|NP_810474.1| hypothetical protein BT1561 [B;  PMID:;
3.          9          127          27          90.77          5.0e-04
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

Contact Webmaster JCSG Menu