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   YP_001635819.1;MI10991B
Protein Sequence Comparative Analysis   (PSCA)
 
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YP_001635819.1    REFERENCE SYSTEM

Accession: YP_001635819.1
Description: caur_25may01_Contig941_revised_gene4220
Organism: CHLOROFLEXUS AURANTIACUS J-10-FL
Keyword: caur_25may01_Contig941_revised_gene4220

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:1.8e-22
    Pfam:v3_1_0:1vi0B02   0;  PMID:;
2.          trusted          evalue:2.5e-23
    Pfam:v3_1_0:1rktA02   0;  PMID:;
3.          trusted          evalue:4.8e-12
    Pfam:PF00440   Bacterial regulatory proteins, tetR family;  PMID:;
4.          trusted          evalue:3.8e-13
    Pfam:v3_1_0:2tct001   0;  PMID:;
5.          trusted          evalue:4.7e-11
    Pfam:v3_1_0:1jt6A01   0;  PMID:;
6.          trusted          evalue:9.6e-11
    Pfam:v3_1_0:1t33B01   0;  PMID:;
7.          trusted          evalue:1.8e-09
    Pfam:v3_1_0:1zkgA01   0;  PMID:;
8.          trusted          evalue:9.2e-09
    Pfam:v3_1_0:1vi0A01   0;  PMID:;
9.          trusted          evalue:3.3e-07
    Pfam:v3_1_0:1jusD01   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          198          100          99.49          1.0e-111
     Pdb:3QBM CRYSTAL STRUCTURE OF A TETR TRANSCRIPTIONAL REGULATOR (CAUR_; PMID:;
2.          1          172          35          86.36          2.0e-29
     Pdb:3EUP THE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR, TETR; PMID:;
3.          6          180          27          87.88          4.0e-10
     Pdb:1SGM CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN YXAF ; PMID:;
4.          3          177          25          87.88          3.0e-09
     Pdb:4PXI ELUCIDATION OF THE STRUCTURAL AND FUNCTIONAL MECHANISM OF AC; PMID:;
     Pdb:1UI6 CRYSTAL STRUCTURE OF GAMMA-BUTYROLACTONE RECEPTOR (ARPA- LIK; PMID:;
     Pdb:1UI5 CRYSTAL STRUCTURE OF GAMMA-BUTYROLACTONE RECEPTOR (ARPA LIKE; PMID:;
5.          3          162          26          80.30          2.0e-08
     Pdb:2HYJ THE CRYSTAL STRUCTURE OF A TETR-FAMILY TRANSCRIPTIONAL REGUL; PMID:;
6.          7          152          30          73.23          1.0e-07
     Pdb:3VPR CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR; PMID:;
7.          1          183          22          91.92          4.0e-07
     Pdb:3KNW CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR (T; PMID:;
8.          6          183          24          89.39          1.0e-06
     Pdb:3RD3 STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATO; PMID:;
9.          6          183          24          89.39          1.0e-06
     Pdb:4L62 CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL ; PMID:;
10.          6          172          27          83.84          2.0e-06
     Pdb:3DPJ THE CRYSTAL STRUCTURE OF A TETR TRANSCRIPTION REGULATOR FROM; PMID:;
11.          6          195          25          95.45          2.0e-06
     Pdb:4JNN CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR FR; PMID:;
12.          6          195          25          95.45          2.0e-06
     Pdb:4KWA CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR FR; PMID:;
13.          6          195          25          95.45          2.0e-06
     Pdb:4NEL CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR FR; PMID:;
14.          6          195          25          95.45          3.0e-06
     Pdb:4ICH CRYSTAL STRUCTURE OF A PUTATIVE TETR FAMILY TRANSCRIPTIONAL ; PMID:;
15.          3          168          28          83.33          5.0e-06
     Pdb:2XDN TRANSCRIPTION FACTOR TTGR H67A MUTANT ; PMID:;
16.          3          168          27          83.33          2.0e-05
     Pdb:2UXH TTGR IN COMPLEX WITH QUERCETIN ; PMID:;
     Pdb:2UXU TTGR IN COMPLEX WITH NARINGENIN ; PMID:;
     Pdb:2UXI PHLORETIN IN COMPLEX WITH TTGR ; PMID:;
     Pdb:2UXO TTGR IN COMPLEX WITH TETRACYCLINE ; PMID:;
     Pdb:2UXP TTGR IN COMPLEX CHLORAMPHENICOL ; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          198          100          99.49          1.0e-106
     gi|76261078|ref|ZP_00768700.1| regulatory protein, TetR [Chlo;  PMID:;
     gi|76164044|gb|EAO58202.1| regulatory protein, TetR [Chlo;  PMID:;
2.          1          190          49          95.45          8.0e-54
     gi|75908702|ref|YP_322998.1| Transcriptional Regulator, Tet;  PMID:;
     gi|75702427|gb|ABA22103.1| Transcriptional Regulator, Tet;  PMID:;
3.          1          190          48          95.45          9.0e-53
     gi|17232059|ref|NP_488607.1| transcriptional regulator [Nos;  PMID:11759840;
     gi|17133703|dbj|BAB76266.1| transcriptional regulator [Nos;  PMID:11759840;
     gi|25534034|pir||AG2376 transcription regulator alr456;  PMID:11759840;
4.          1          191          48          95.96          2.0e-51
     gi|23125675|ref|ZP_00107598.1| COG1309: Transcriptional regul;  PMID:;
5.          1          193          39          96.97          1.0e-39
     gi|82749474|ref|ZP_00911926.1| transcriptional regulator [Clo;  PMID:;
     gi|82722667|gb|EAP57464.1| transcriptional regulator [Clo;  PMID:;
6.          1          195          36          97.98          8.0e-38
     gi|89154559|gb|EAR74588.1| regulatory protein, TetR [Baci;  PMID:;
     gi|89207498|ref|ZP_01186038.1| regulatory protein, TetR [Baci;  PMID:;
7.          1          195          36          97.98          6.0e-36
     gi|74491520|gb|EAO54732.1| Transcriptional regulator, Tet;  PMID:;
     gi|75761003|ref|ZP_00741007.1| Transcriptional regulator, Tet;  PMID:;
8.          1          173          41          86.87          6.0e-35
     gi|36959054|gb|AAQ87479.1| Transcriptional regulator, Tet;  PMID:;
9.          1          173          39          86.87          4.0e-32
     gi|90436449|gb|EAS61805.1| regulatory protein, TetR [Flav;  PMID:;
     gi|90587500|ref|ZP_01243153.1| regulatory protein, TetR [Flav;  PMID:;
10.          1          193          36          96.97          5.0e-32
     gi|90587580|ref|ZP_01243233.1| regulatory protein, TetR [Flav;  PMID:;
     gi|90436529|gb|EAS61885.1| regulatory protein, TetR [Flav;  PMID:;
11.          1          191          37          95.96          1.0e-31
     gi|95134057|gb|EAT15715.1| transcriptional regulator, Tet;  PMID:;
     gi|95929761|ref|ZP_01312502.1| transcriptional regulator, Tet;  PMID:;
12.          1          191          34          95.96          1.0e-30
     gi|83855858|ref|ZP_00949387.1| transcriptional regulator [Cro;  PMID:;
     gi|83849658|gb|EAP87526.1| transcriptional regulator [Cro;  PMID:;
13.          1          173          36          86.87          1.0e-28
     gi|29895505|gb|AAP08792.1| Transcriptional regulator, Tet;  PMID:;
     gi|30019960|ref|NP_831591.1| Transcriptional regulator, Tet;  PMID:;
14.          1          190          35          95.45          1.0e-28
     gi|75759789|ref|ZP_00739867.1| Transcriptional regulator, Tet;  PMID:;
     gi|74492739|gb|EAO55877.1| Transcriptional regulator, Tet;  PMID:;
15.          1          173          36          86.87          2.0e-28
     gi|21392945|ref|NP_653024.1| transcriptional regulator [Bac;  PMID:;
     gi|20520332|gb|AAM26213.1| transcriptional regulator, Tet;  PMID:;
     gi|47552396|gb|AAT28985.2| transcriptional regulator, Tet;  PMID:;
     gi|6470199|gb|AAF13653.1| pXO2-48 [Bacillus anthracis] ;  PMID:;
     gi|51702201|sp|Q9RMY4|Y6555_BACAN Putative HTH-type transcriptio;  PMID:;
     gi|47566726|ref|YP_016565.2| transcriptional regulator, tet;  PMID:;
     gi|10956438|ref|NP_053203.1| hypothetical protein pxo2_48 [;  PMID:;
16.          1          173          36          86.87          2.0e-28
     gi|52142097|ref|YP_084727.1| transcriptional regulator, Tet;  PMID:;
     gi|51975566|gb|AAU17116.1| transcriptional regulator, Tet;  PMID:;
17.          1          173          36          86.87          3.0e-28
     gi|47570375|ref|ZP_00241017.1| transcriptional regulator, tet;  PMID:;
     gi|47552961|gb|EAL11370.1| transcriptional regulator, tet;  PMID:;
18.          1          173          36          86.87          6.0e-28
     gi|49186239|ref|YP_029491.1| transcriptional regulator, Tet;  PMID:;
     gi|30258025|gb|AAP27253.1| transcriptional regulator, Tet;  PMID:;
     gi|47503922|gb|AAT32598.1| transcriptional regulator, Tet;  PMID:;
     gi|65320722|ref|ZP_00393681.1| COG1309: Transcriptional regul;  PMID:;
     gi|30263390|ref|NP_845767.1| transcriptional regulator, Tet;  PMID:;
     gi|47528774|ref|YP_020123.1| transcriptional regulator, tet;  PMID:;
     gi|49180166|gb|AAT55542.1| transcriptional regulator, Tet;  PMID:;
19.          1          173          36          86.87          7.0e-28
     gi|49329785|gb|AAT60431.1| transcriptional regulator, Tet;  PMID:;
     gi|49478229|ref|YP_037531.1| transcriptional regulator, Tet;  PMID:;
20.          1          173          35          86.87          7.0e-28
     gi|56899912|ref|YP_173285.1| transcriptional regulator, Tet;  PMID:;
     gi|56800346|gb|AAW31013.1| transcriptional regulator, Tet;  PMID:;
21.          1          191          32          95.96          7.0e-28
22.          1          196          32          98.48          1.0e-27
     gi|89889822|ref|ZP_01201333.1| transcriptional regulator, Tet;  PMID:;
     gi|89518095|gb|EAS20751.1| transcriptional regulator, Tet;  PMID:;
23.          1          191          30          95.96          9.0e-26
     gi|50877206|emb|CAG37046.1| conserved hypothetical protein;  PMID:;
     gi|51246169|ref|YP_066053.1| hypothetical protein DP2317 [D;  PMID:;
24.          3          180          34          89.39          3.0e-22
     gi|88917826|gb|EAR37013.1| transcriptional regulator [Geo;  PMID:;
     gi|88935443|ref|ZP_01141075.1| transcriptional regulator [Geo;  PMID:;
25.          3          189          33          93.94          1.0e-20
     gi|78195096|gb|ABB32863.1| transcriptional regulator, Tet;  PMID:;
     gi|78223841|ref|YP_385588.1| transcriptional regulator, Tet;  PMID:;
26.          3          172          28          85.35          2.0e-19
     gi|89158129|gb|EAR78119.1| regulatory protein, TetR [Baci;  PMID:;
     gi|89203998|ref|ZP_01182577.1| regulatory protein, TetR [Baci;  PMID:;
27.          3          196          25          97.47          2.0e-19
     gi|88713645|ref|ZP_01107727.1| hypothetical protein FB2170_13;  PMID:;
     gi|88708155|gb|EAR00393.1| hypothetical protein FB2170_13;  PMID:;
28.          3          195          29          96.97          6.0e-19
     gi|88784657|gb|EAR15827.1| hypothetical protein RB2501_15;  PMID:;
     gi|88805839|ref|ZP_01121358.1| hypothetical protein RB2501_15;  PMID:;
29.          8          191          30          92.42          2.0e-17
30.          5          180          29          88.38          3.0e-17
     gi|71740741|gb|EAO35902.1| regulatory protein, TetR [Pelo;  PMID:;
     gi|71838703|ref|ZP_00678460.1| regulatory protein, TetR [Pelo;  PMID:;
31.          2          196          30          97.98          6.0e-17
     gi|83859586|ref|ZP_00953106.1| hypothetical protein OA2633_06;  PMID:;
     gi|83851945|gb|EAP89799.1| hypothetical protein OA2633_06;  PMID:;
32.          6          193          29          94.44          1.0e-16
     gi|90201956|ref|ZP_01204602.1| regulatory protein, TetR [Myco;  PMID:;
     gi|90198835|gb|EAS25594.1| regulatory protein, TetR [Myco;  PMID:;
33.          3          183          27          90.91          2.0e-16
     gi|30698470|dbj|BAC76583.1| putative TetR family receptor ;  PMID:;
     gi|30795097|ref|NP_851547.1| putative TetR family receptor ;  PMID:;
34.          6          195          28          95.45          1.0e-15
     gi|78222023|ref|YP_383770.1| transcriptional regulator, Tet;  PMID:;
     gi|78193278|gb|ABB31045.1| transcriptional regulator, Tet;  PMID:;
35.          5          195          30          95.96          2.0e-15
     gi|15607337|ref|NP_214710.1| POSSIBLE TRANSCRIPTIONAL REGUL;  PMID:;
     gi|13879690|gb|AAK44427.1| transcriptional regulator, put;  PMID:;
     gi|31791374|ref|NP_853867.1| PUTATIVE TRANSCRIPTIONAL REGUL;  PMID:;
     gi|15839576|ref|NP_334613.1| transcriptional regulator, put;  PMID:;
     gi|31616959|emb|CAD93066.1| PUTATIVE TRANSCRIPTIONAL REGUL;  PMID:;
     gi|2909594|emb|CAA17318.1| POSSIBLE TRANSCRIPTIONAL REGUL;  PMID:;
36.          3          191          28          94.95          2.0e-15
     gi|21218712|ref|NP_624491.1| transcriptional regulatory pro;  PMID:;
     gi|5748617|emb|CAB53122.1| putative transcriptional regul;  PMID:;
37.          8          186          27          89.90          2.0e-15
     gi|47501386|gb|AAT30062.1| transcriptional regulator, Tet;  PMID:;
     gi|47526238|ref|YP_017587.1| transcriptional regulator, tet;  PMID:;
     gi|30254697|gb|AAP24946.1| transcriptional regulator, Tet;  PMID:;
     gi|30261083|ref|NP_843460.1| transcriptional regulator, Tet;  PMID:;
     gi|65318363|ref|ZP_00391322.1| COG1309: Transcriptional regul;  PMID:;
     gi|49177847|gb|AAT53223.1| transcriptional regulator, Tet;  PMID:;
     gi|49183920|ref|YP_027172.1| transcriptional regulator, Tet;  PMID:;
38.          8          191          30          92.42          3.0e-15
     gi|89343117|ref|ZP_01195346.1| regulatory protein, TetR [Myco;  PMID:;
     gi|89316908|gb|EAS08418.1| regulatory protein, TetR [Myco;  PMID:;
39.          8          186          27          89.90          4.0e-15
     gi|52144368|ref|YP_082460.1| transcriptional regulator, Tet;  PMID:;
     gi|51977837|gb|AAU19387.1| transcriptional regulator, Tet;  PMID:;
40.          7          172          32          83.33          5.0e-15
     gi|8894823|emb|CAB96019.1| putative tetR-family regulator;  PMID:12000953;
     gi|21219550|ref|NP_625329.1| tetR-family regulatory protein;  PMID:12000953,8843436;
41.          3          183          29          90.91          5.0e-15
     gi|84497579|ref|ZP_00996401.1| putative transcriptional regul;  PMID:;
     gi|84382467|gb|EAP98349.1| putative transcriptional regul;  PMID:;
42.          6          192          27          93.94          5.0e-15
     gi|98975840|gb|ABF51991.1| transcriptional regulator, Tet;  PMID:;
     gi|103485763|ref|YP_615324.1| transcriptional regulator, Tet;  PMID:;
43.          2          193          31          96.46          2.0e-14
     gi|54026901|ref|YP_121143.1| putative transcriptional regul;  PMID:;
     gi|54018409|dbj|BAD59779.1| putative transcriptional regul;  PMID:;
44.          1          187          27          93.94          2.0e-14
     gi|93357259|gb|ABF11347.1| transcriptional regulator, Tet;  PMID:;
     gi|94313407|ref|YP_586616.1| transcriptional regulator, Tet;  PMID:;
45.          6          180          27          87.88          2.0e-14
     gi|39982640|gb|AAR34100.1| transcriptional regulator, Tet;  PMID:;
     gi|39995876|ref|NP_951827.1| transcriptional regulator, Tet;  PMID:;
46.          4          172          32          84.85          3.0e-14
     gi|29605081|dbj|BAC69149.1| putative TetR-family transcrip;  PMID:;
     gi|29827980|ref|NP_822614.1| TetR-family transcriptional re;  PMID:;
47.          7          180          30          87.37          3.0e-14
     gi|41406253|ref|NP_959089.1| hypothetical protein MAP0155 [;  PMID:;
     gi|41394601|gb|AAS02472.1| hypothetical protein MAP_0155 ;  PMID:;
48.          8          195          31          94.44          4.0e-14
     gi|41409733|ref|NP_962569.1| hypothetical protein MAP3635 [;  PMID:;
     gi|41398565|gb|AAS06185.1| hypothetical protein MAP_3635 ;  PMID:;
49.          8          186          26          89.90          4.0e-14
     gi|49479986|ref|YP_037293.1| transcriptional regulator, Tet;  PMID:;
     gi|49331542|gb|AAT62188.1| transcriptional regulator, Tet;  PMID:;
50.          8          186          26          89.90          4.0e-14
     gi|42738208|gb|AAS42138.1| transcriptional regulator, Tet;  PMID:;
     gi|42782283|ref|NP_979530.1| transcriptional regulator, Tet;  PMID:;
51.          3          187          30          92.93          5.0e-14
52.          1          181          29          90.91          5.0e-14
     gi|45657457|ref|YP_001543.1| transcriptional regulator (Tet;  PMID:;
     gi|45600696|gb|AAS70180.1| transcriptional regulator (Tet;  PMID:;
53.          8          186          26          89.90          5.0e-14
     gi|29896824|gb|AAP10102.1| Transcriptional regulator, Tet;  PMID:;
     gi|30021270|ref|NP_832901.1| Transcriptional regulator, Tet;  PMID:;
54.          8          186          26          89.90          5.0e-14
     gi|89205824|ref|ZP_01184390.1| regulatory protein, TetR [Baci;  PMID:;
     gi|89156226|gb|EAR76228.1| regulatory protein, TetR [Baci;  PMID:;
55.          3          172          31          85.35          6.0e-14
     gi|16263491|ref|NP_436284.1| Putative transcriptional regul;  PMID:;
     gi|14524188|gb|AAK65696.1| Putative transcriptional regul;  PMID:;
56.          6          195          28          95.45          6.0e-14
     gi|14027534|dbj|BAB53803.1| transcriptional regulator [Mes;  PMID:;
     gi|13476773|ref|NP_108342.1| transcriptional regulator [Mes;  PMID:;
57.          8          186          26          89.90          8.0e-14
     gi|75761601|ref|ZP_00741554.1| Transcriptional regulator, Tet;  PMID:;
     gi|74490905|gb|EAO54168.1| Transcriptional regulator, Tet;  PMID:;
58.          4          157          29          77.27          1.0e-13
     gi|31618932|emb|CAD97037.1| CONSERVED HYPOTHETICAL PROTEIN;  PMID:;
     gi|31793340|ref|NP_855833.1| hypothetical protein Mb2184c [;  PMID:12788972;
59.          8          172          32          82.83          2.0e-13
60.          11          195          29          92.93          2.0e-13
     gi|81252450|ref|ZP_00877040.1| COG1309: Transcriptional regul;  PMID:;
61.          7          172          28          83.33          2.0e-13
     gi|84788113|gb|ABC64295.1| Transcriptional regulator, Tet;  PMID:;
     gi|85375030|ref|YP_459092.1| Transcriptional regulator, Tet;  PMID:;
62.          8          197          28          95.45          3.0e-13
     gi|75677232|ref|YP_319653.1| Transcriptional regulatory pro;  PMID:;
     gi|74422102|gb|ABA06301.1| Transcriptional regulatory pro;  PMID:;
63.          5          180          26          88.38          3.0e-13
     gi|77918051|ref|YP_355866.1| transcriptional regulator, Tet;  PMID:;
     gi|77544134|gb|ABA87696.1| transcriptional regulator, Tet;  PMID:;
64.          8          186          25          89.90          3.0e-13
     gi|47558492|gb|EAL16815.1| transcriptional regulator, tet;  PMID:;
     gi|47564340|ref|ZP_00235385.1| transcriptional regulator, tet;  PMID:;
65.          1          174          28          87.37          4.0e-13
     gi|85776031|gb|ABC82868.1| transcriptional regulator, Tet;  PMID:;
     gi|86159520|ref|YP_466305.1| transcriptional regulator, Tet;  PMID:;
66.          1          173          31          86.87          5.0e-13
     gi|49082588|gb|AAT50694.1| PA0475 [synthetic construct] ;  PMID:;
67.          1          173          31          86.87          5.0e-13
     gi|9946337|gb|AAG03864.1| probable transcriptional regul;  PMID:;
     gi|15595672|ref|NP_249166.1| probable transcriptional regul;  PMID:;
     gi|84318750|ref|ZP_00967170.1| COG1309: Transcriptional regul;  PMID:;
68.          8          193          26          93.43          9.0e-13
     gi|13476759|ref|NP_108328.1| transcription regulator [Mesor;  PMID:;
     gi|14027520|dbj|BAB53789.1| transcription regulator [Mesor;  PMID:;
69.          5          173          30          84.85          1.0e-12
     gi|39936514|ref|NP_948790.1| possible transcriptional regul;  PMID:;
     gi|39650370|emb|CAE28892.1| possible transcriptional regul;  PMID:;
70.          6          198          30          96.97          1.0e-12
     gi|14023252|dbj|BAB49859.1| transcriptional regulator [Mes;  PMID:;
     gi|13472506|ref|NP_104073.1| transcriptional regulator [Mes;  PMID:;
71.          6          182          29          88.89          1.0e-12
     gi|2632554|emb|CAB12062.1| transcriptional regulator [Bac;  PMID:;
     gi|2415719|dbj|BAA22229.1| LmrA [Bacillus subtilis] ;  PMID:;
     gi|16077337|ref|NP_388150.1| transcriptional regulator [Bac;  PMID:;
72.          8          191          28          92.42          1.0e-12
     gi|77867573|gb|EAO98849.1| transcriptional regulator, Tet;  PMID:;
     gi|77953601|ref|ZP_00818008.1| transcriptional regulator, Tet;  PMID:;
73.          11          182          27          86.36          1.0e-12
     gi|38142394|dbj|BAD00998.1| hypothetical protein [Staphylo;  PMID:;
     gi|38257101|ref|NP_940763.1| hypothetical protein pPI-1p14 ;  PMID:;
74.          3          194          27          96.46          1.0e-12
     gi|68228126|ref|ZP_00567330.1| regulatory protein, TetR [Fran;  PMID:;
     gi|68204217|gb|EAN18385.1| regulatory protein, TetR [Fran;  PMID:;
75.          1          173          30          86.87          3.0e-12
     gi|84324301|ref|ZP_00972361.1| COG1309: Transcriptional regul;  PMID:;
76.          8          191          30          92.42          3.0e-12
77.          8          191          30          92.42          3.0e-12
78.          22          185          28          82.32          3.0e-12
     gi|27376197|ref|NP_767726.1| transcriptional regulatory pro;  PMID:;
     gi|27349337|dbj|BAC46351.1| transcriptional regulatory pro;  PMID:;
79.          3          198          27          98.48          3.0e-12
     gi|54026850|ref|YP_121092.1| putative transcriptional regul;  PMID:;
     gi|54018358|dbj|BAD59728.1| putative transcriptional regul;  PMID:;
80.          1          185          26          92.93          3.0e-12
81.          7          191          26          92.93          3.0e-12
82.          7          191          24          92.93          3.0e-12
     gi|74055995|gb|AAZ96435.1| Possible Transcriptional Regul;  PMID:;
     gi|74316500|ref|YP_314240.1| Possible Transcriptional Regul;  PMID:;
83.          5          173          29          84.85          6.0e-12
     gi|90424587|ref|YP_532957.1| transcriptional regulator, Tet;  PMID:;
     gi|90106601|gb|ABD88638.1| transcriptional regulator, Tet;  PMID:;
84.          3          181          22          89.90          6.0e-12
     gi|82703088|ref|YP_412654.1| transcriptional regulator, Tet;  PMID:;
     gi|82411153|gb|ABB75262.1| transcriptional regulator, Tet;  PMID:;
85.          1          181          30          90.91          7.0e-12
     gi|94415685|ref|ZP_01295521.1| hypothetical protein PaerP_010;  PMID:;
86.          6          176          28          85.86          7.0e-12
     gi|86749237|ref|YP_485733.1| transcriptional regulator, Tet;  PMID:;
     gi|86572265|gb|ABD06822.1| transcriptional regulator, Tet;  PMID:;
87.          5          173          28          84.85          7.0e-12
     gi|27379063|ref|NP_770592.1| transcriptional regulatory pro;  PMID:;
     gi|27352213|dbj|BAC49217.1| transcriptional regulatory pro;  PMID:;
88.          6          181          24          88.38          7.0e-12
     gi|87287254|gb|EAQ79155.1| transcriptional regulator, Tet;  PMID:;
     gi|87310008|ref|ZP_01092141.1| transcriptional regulator, Tet;  PMID:;
89.          5          181          27          88.89          1.0e-11
     gi|13474463|ref|NP_106031.1| transcriptional regulator [Mes;  PMID:;
     gi|14025216|dbj|BAB51817.1| transcriptional regulator [Mes;  PMID:;
90.          7          187          27          90.91          1.0e-11
     gi|29830248|ref|NP_824882.1| gamma-butyrolactone receptor p;  PMID:;
     gi|29607359|dbj|BAC71417.1| putative gamma-butyrolactone r;  PMID:;
91.          6          191          26          93.43          1.0e-11
     gi|41396082|gb|AAS03948.1| hypothetical protein MAP_1631c;  PMID:;
     gi|41407729|ref|NP_960565.1| hypothetical protein MAP1631c ;  PMID:;
92.          2          191          25          95.45          1.0e-11
     gi|66045990|ref|YP_235831.1| regulatory protein, TetR [Pseu;  PMID:;
     gi|63256697|gb|AAY37793.1| regulatory protein, TetR [Pseu;  PMID:;
93.          3          175          34          86.87          2.0e-11
     gi|86359359|ref|YP_471251.1| putative transcriptional regul;  PMID:;
     gi|86283461|gb|ABC92524.1| putative transcriptional regul;  PMID:;
94.          3          174          30          86.36          2.0e-11
     gi|36958988|gb|AAQ87413.1| Transcriptional regulator, Tet;  PMID:;
95.          7          181          29          87.88          2.0e-11
     gi|66044000|ref|YP_233841.1| regulatory protein, TetR [Pseu;  PMID:;
     gi|63254707|gb|AAY35803.1| regulatory protein, TetR [Pseu;  PMID:;
96.          3          195          29          96.97          2.0e-11
     gi|5199319|gb|AAD40801.1| gamma-butyrolactone receptor p;  PMID:10467127;
     gi|11356708|pir||T44586 gamma-butyrolactone receptor p;  PMID:10467127;
97.          1          172          28          86.36          2.0e-11
     gi|74056768|gb|AAZ97208.1| Possible Transcriptional Regul;  PMID:;
     gi|74317273|ref|YP_315013.1| Possible Transcriptional Regul;  PMID:;
98.          7          180          30          87.37          3.0e-11
     gi|41409759|ref|NP_962595.1| hypothetical protein MAP3661c ;  PMID:;
     gi|41398591|gb|AAS06211.1| hypothetical protein MAP_3661c;  PMID:;
99.          6          173          29          84.34          3.0e-11
     gi|91684225|gb|ABE40527.1| regulatory protein, TetR [Rhod;  PMID:;
     gi|91977769|ref|YP_570428.1| regulatory protein, TetR [Rhod;  PMID:;
100.          3          175          28          86.87          3.0e-11
     gi|17937906|ref|NP_534695.1| transcriptional regulator, Tet;  PMID:;
     gi|17742672|gb|AAL45011.1| transcriptional regulator, Tet;  PMID:;
101.          3          175          28          86.87          3.0e-11
     gi|15159043|gb|AAK89222.1| AGR_L_1283p [Agrobacterium tum;  PMID:;
     gi|15890765|ref|NP_356437.1| hypothetical protein AGR_L_128;  PMID:;
102.          7          173          27          83.84          3.0e-11
     gi|47600644|emb|CAE55766.1| hypothetical protein [Escheric;  PMID:15292145;
103.          7          173          27          83.84          3.0e-11
     gi|26109843|gb|AAN82048.1| Hypothetical protein c3600 [Es;  PMID:12471157;
     gi|26249435|ref|NP_755475.1| hypothetical protein c3600 [Es;  PMID:12471157;
104.          6          180          24          87.88          3.0e-11
     gi|56178811|gb|AAV81533.1| Transcriptional regulator, Tet;  PMID:;
     gi|56459801|ref|YP_155082.1| Transcriptional regulator, Tet;  PMID:;
105.          10          198          28          94.95          4.0e-11
     gi|93356881|gb|ABF10969.1| transcriptional regulator, Tet;  PMID:;
     gi|94313029|ref|YP_586238.1| transcriptional regulator, Tet;  PMID:;
106.          1          157          27          78.79          4.0e-11
     gi|73537755|ref|YP_298122.1| regulatory protein, TetR [Rals;  PMID:;
     gi|72121092|gb|AAZ63278.1| regulatory protein, TetR [Rals;  PMID:;
107.          1          186          24          93.43          4.0e-11
     gi|29828065|ref|NP_822699.1| TetR-family transcriptional re;  PMID:;
     gi|29605167|dbj|BAC69234.1| putative TetR-family transcrip;  PMID:;
108.          11          183          28          86.87          5.0e-11
     gi|90204658|ref|ZP_01207301.1| regulatory protein, TetR [Myco;  PMID:;
     gi|90196710|gb|EAS23472.1| regulatory protein, TetR [Myco;  PMID:;
109.          23          187          27          82.83          5.0e-11
     gi|53802379|ref|YP_112849.1| transcriptional regulator, Tet;  PMID:;
     gi|53756140|gb|AAU90431.1| transcriptional regulator, Tet;  PMID:;
110.          5          191          23          93.94          5.0e-11
     gi|87121245|ref|ZP_01077135.1| transcriptional regulator, Tet;  PMID:;
     gi|86163402|gb|EAQ64677.1| transcriptional regulator, Tet;  PMID:;
111.          2          191          29          95.45          6.0e-11
     gi|29610833|dbj|BAC74878.1| putative TetR-family transcrip;  PMID:;
     gi|29833709|ref|NP_828343.1| TetR-family transcriptional re;  PMID:;
112.          7          187          26          90.91          6.0e-11
113.          8          185          26          89.39          6.0e-11
     gi|56404672|sp|Q9RAJ1|DHAR_MYCSX HTH-type transcriptional repre;  PMID:;
     gi|6688824|emb|CAB65288.1| inactive regulatory protein [M;  PMID:10735862;
114.          3          177          25          87.88          6.0e-11
     gi|7479214|pir||T42057 cprA protein - Streptomyces co;  PMID:9643542;
     gi|21224630|ref|NP_630409.1| transcriptional regulator [Str;  PMID:12000953,8843436;
     gi|3201567|dbj|BAA28747.1| CprA [Streptomyces coelicolor];  PMID:9643542;
     gi|13872776|emb|CAC37533.1| transcriptional regulator [Str;  PMID:12000953;
115.          3          196          29          97.47          8.0e-11
     gi|4210936|gb|AAD12171.1| butyrolactone receptor [Strept;  PMID:10220165;
116.          5          175          28          85.86          8.0e-11
     gi|94417443|ref|ZP_01297261.1| hypothetical protein PaerP_010;  PMID:;
117.          1          181          28          90.91          8.0e-11
     gi|76874515|emb|CAI85736.1| putative transcriptional regul;  PMID:;
     gi|77359604|ref|YP_339179.1| transcriptional regulator [Pse;  PMID:;
118.          7          157          26          75.76          8.0e-11
     gi|29604860|dbj|BAC68928.1| putative TetR-family transcrip;  PMID:;
     gi|29827759|ref|NP_822393.1| TetR-family transcriptional re;  PMID:;
119.          3          175          32          86.87          1.0e-10
     gi|29604709|dbj|BAC68778.1| putative TetR-family transcrip;  PMID:;
     gi|29827609|ref|NP_822243.1| TetR-family transcriptional re;  PMID:;
120.          5          192          29          94.44          1.0e-10
     gi|86140120|ref|ZP_01058683.1| possible transcriptional regul;  PMID:;
     gi|85823215|gb|EAQ43427.1| possible transcriptional regul;  PMID:;
121.          1          181          26          90.91          1.0e-10
     gi|91720353|gb|EAS86278.1| regulatory protein, TetR [Psyc;  PMID:;
     gi|91770643|ref|ZP_01272467.1| regulatory protein, TetR [Psyc;  PMID:;
122.          1          169          25          84.85          1.0e-10
     gi|94313297|ref|YP_586506.1| transcriptional regulator, Tet;  PMID:;
     gi|93357149|gb|ABF11237.1| transcriptional regulator, Tet;  PMID:;
123.          6          181          25          88.38          1.0e-10
124.          8          191          28          92.42          2.0e-10
     gi|103485518|ref|YP_615079.1| transcriptional regulator, Tet;  PMID:;
     gi|98975595|gb|ABF51746.1| transcriptional regulator, Tet;  PMID:;
125.          7          180          26          87.37          2.0e-10
     gi|78061103|ref|YP_371011.1| transcriptional regulator, Tet;  PMID:;
     gi|77968988|gb|ABB10367.1| transcriptional regulator, Tet;  PMID:;
126.          7          180          26          87.37          2.0e-10
     gi|105897171|gb|ABF80335.1| transcriptional regulator, Tet;  PMID:;
127.          7          190          25          92.42          2.0e-10
     gi|67863587|gb|EAM58598.1| regulatory protein, TetR [Soli;  PMID:;
     gi|67929276|ref|ZP_00522459.1| regulatory protein, TetR [Soli;  PMID:;
128.          9          166          25          79.29          2.0e-10
     gi|85059875|ref|YP_455577.1| putative transcriptional regul;  PMID:;
     gi|84780395|dbj|BAE75172.1| putative transcriptional regul;  PMID:;
129.          6          196          24          95.96          2.0e-10
     gi|71555073|gb|AAZ34284.1| transcriptional regulator, Tet;  PMID:;
     gi|71734520|ref|YP_275796.1| transcriptional regulator, Tet;  PMID:;
130.          3          191          23          94.95          2.0e-10
     gi|28192509|gb|AAM78022.1| butyrolactone receptor [Strept;  PMID:;
131.          3          168          30          83.33          3.0e-10
132.          7          184          27          89.39          3.0e-10
     gi|82715177|gb|EAP50246.1| putative TetR-family transcrip;  PMID:;
     gi|82737804|ref|ZP_00900649.1| putative TetR-family transcrip;  PMID:;
133.          8          191          25          92.42          3.0e-10
     gi|98976304|gb|ABF52455.1| transcriptional regulator, Tet;  PMID:;
     gi|103486227|ref|YP_615788.1| transcriptional regulator, Tet;  PMID:;
134.          3          177          25          87.88          3.0e-10
     gi|51247824|pdb|1UI5|B Chain B, Crystal Structure Of ;  PMID:;
     gi|51247823|pdb|1UI5|A Chain A, Crystal Structure Of ;  PMID:;
135.          3          177          25          87.88          3.0e-10
     gi|7479105|pir||T35863 A-factor receptor homolog SC9B;  PMID:9643542;
     gi|7479215|pir||T42068 cprB protein - Streptomyces co;  PMID:9643542;
     gi|51247825|pdb|1UI6|A Chain A, Crystal Structure Of ;  PMID:;
     gi|21224401|ref|NP_630180.1| A-factor receptor homolog [Str;  PMID:12000953,8843436;
     gi|3201569|dbj|BAA28748.1| CprB [Streptomyces coelicolor];  PMID:9643542;
     gi|51247826|pdb|1UI6|B Chain B, Crystal Structure Of ;  PMID:;
     gi|4691397|emb|CAB41564.1| A-factor receptor homolog [Str;  PMID:12000953;
136.          9          172          26          82.32          4.0e-10
     gi|89319472|gb|EAS10963.1| regulatory protein, TetR [Myco;  PMID:;
     gi|89340221|ref|ZP_01192493.1| regulatory protein, TetR [Myco;  PMID:;
137.          1          166          25          83.33          4.0e-10
138.          2          166          23          82.83          4.0e-10
     gi|87119399|ref|ZP_01075297.1| transcriptional regulator, Tet;  PMID:;
     gi|86165790|gb|EAQ67057.1| transcriptional regulator, Tet;  PMID:;
139.          15          166          30          76.26          5.0e-10
     gi|27377688|ref|NP_769217.1| transcriptional regulatory pro;  PMID:;
     gi|27350833|dbj|BAC47842.1| transcriptional regulatory pro;  PMID:;
140.          12          172          29          80.81          5.0e-10
     gi|103488169|ref|YP_617730.1| transcriptional regulator, Tet;  PMID:;
     gi|98978246|gb|ABF54397.1| transcriptional regulator, Tet;  PMID:;
141.          6          181          28          88.38          5.0e-10
     gi|71907159|ref|YP_284746.1| regulatory protein, TetR [Dech;  PMID:;
     gi|71846780|gb|AAZ46276.1| regulatory protein, TetR [Dech;  PMID:;
142.          5          173          27          84.85          5.0e-10
143.          3          178          27          88.38          5.0e-10
     gi|91692646|gb|ABE35844.1| Transcriptional regulator, Tet;  PMID:;
     gi|91779986|ref|YP_555194.1| Transcriptional regulator, Tet;  PMID:;
144.          7          180          25          87.37          5.0e-10
145.          3          193          23          95.96          5.0e-10
     gi|35211046|dbj|BAC88426.1| TetR family transcriptional re;  PMID:14621292;
     gi|37520054|ref|NP_923431.1| TetR family transcriptional re;  PMID:14621296;
146.          6          175          30          85.35          7.0e-10
     gi|91690469|gb|ABE33667.1| Transcriptional regulator, Tet;  PMID:;
     gi|91777809|ref|YP_553017.1| Transcriptional regulator, Tet;  PMID:;
147.          7          175          29          84.85          7.0e-10
     gi|47571527|ref|ZP_00241578.1| COG1309: Transcriptional regul;  PMID:;
148.          2          191          25          95.45          7.0e-10
     gi|71738046|ref|YP_274606.1| transcriptional regulator, Tet;  PMID:;
     gi|71558599|gb|AAZ37810.1| transcriptional regulator, Tet;  PMID:;
149.          1          191          24          95.96          7.0e-10
     gi|91218213|ref|ZP_01255161.1| Possible Transcriptional Regul;  PMID:;
     gi|91183671|gb|EAS70066.1| Possible Transcriptional Regul;  PMID:;
150.          7          196          22          95.45          7.0e-10
     gi|90020967|ref|YP_526794.1| putative transcriptional regul;  PMID:;
     gi|89950567|gb|ABD80582.1| putative transcriptional regul;  PMID:;
151.          2          194          20          96.97          7.0e-10
     gi|83944276|ref|ZP_00956731.1| Transcriptional regulator, Tet;  PMID:;
     gi|83844820|gb|EAP82702.1| Transcriptional regulator, Tet;  PMID:;
152.          7          175          33          84.85          9.0e-10
     gi|91695244|gb|ABE42073.1| transcriptional regulator, Tet;  PMID:;
     gi|91786019|ref|YP_546971.1| transcriptional regulator, Tet;  PMID:;
153.          6          198          29          96.97          9.0e-10
154.          6          180          27          87.88          9.0e-10
     gi|563939|dbj|BAA21585.1| yxaF [Bacillus subtilis] ;  PMID:;
     gi|2636546|emb|CAB16036.1| yxaF [Bacillus subtilis subsp.;  PMID:;
     gi|52695489|pdb|1SGM|B Chain B, Crystal Structure Of ;  PMID:;
     gi|52695488|pdb|1SGM|A Chain A, Crystal Structure Of ;  PMID:;
     gi|1176966|sp|P42105|YXAF_BACSU Putative HTH-type transcriptio;  PMID:;
     gi|16081051|ref|NP_391879.1| hypothetical protein BSU39990 ;  PMID:;
155.          7          185          26          89.90          9.0e-10
     gi|38016691|gb|AAR07712.1| unknown [Klebsiella pneumoniae;  PMID:15276215;
     gi|38639593|ref|NP_943362.1| hypothetical protein LV105 [Kl;  PMID:15276215;
156.          1          183          26          91.92          9.0e-10
     gi|52079713|ref|YP_078504.1| putative transscriptional regu;  PMID:;
     gi|52785079|ref|YP_090908.1| YxaF [Bacillus licheniformis A;  PMID:;
     gi|52347581|gb|AAU40215.1| YxaF [Bacillus licheniformis D;  PMID:;
     gi|52002924|gb|AAU22866.1| putative transscriptional regu;  PMID:;
157.          6          195          25          95.45          9.0e-10
     gi|99038045|gb|ABF64657.1| transcriptional regulator, Tet;  PMID:;
     gi|99081765|ref|YP_613919.1| transcriptional regulator, Tet;  PMID:;
158.          2          172          31          85.86          1.0e-09
     gi|29827246|ref|NP_821880.1| TetR-family transcriptional re;  PMID:;
     gi|29604344|dbj|BAC68415.1| putative TetR-family transcrip;  PMID:;
159.          6          193          28          94.44          1.0e-09
     gi|17549017|ref|NP_522357.1| PUTATIVE TRANSCRIPTION REGULAT;  PMID:;
     gi|17431267|emb|CAD17947.1| putative transcription regulat;  PMID:;
160.          3          172          30          85.35          2.0e-09
     gi|70730174|ref|YP_259913.1| transcriptional regulator, Tet;  PMID:;
     gi|68344473|gb|AAY92079.1| transcriptional regulator, Tet;  PMID:;
161.          1          172          27          86.36          2.0e-09
     gi|69256588|ref|ZP_00606082.1| regulatory protein, TetR [Magn;  PMID:;
     gi|68247380|gb|EAN29466.1| regulatory protein, TetR [Magn;  PMID:;
162.          6          183          26          89.39          2.0e-09
     gi|14027307|dbj|BAB54261.1| transcriptional regulator [Mes;  PMID:;
     gi|13476546|ref|NP_108116.1| transcriptional regulator [Mes;  PMID:;
163.          2          172          26          85.86          2.0e-09
     gi|85703876|ref|ZP_01034979.1| Putative transcriptional regul;  PMID:;
     gi|85671196|gb|EAQ26054.1| Putative transcriptional regul;  PMID:;
164.          3          188          24          93.43          2.0e-09
     gi|88711585|ref|ZP_01105673.1| transcriptional regulator [Fla;  PMID:;
     gi|88710526|gb|EAR02758.1| transcriptional regulator [Fla;  PMID:;
165.          7          152          24          73.23          2.0e-09
     gi|15162068|gb|AAK90667.1| AGR_pAT_419p [Agrobacterium tu;  PMID:;
     gi|17743733|gb|AAL45980.1| transcriptional regulator, Tet;  PMID:;
     gi|16119520|ref|NP_396226.1| hypothetical protein AGR_pAT_4;  PMID:;
     gi|17938876|ref|NP_535664.1| transcriptional regulator, Tet;  PMID:;
166.          2          195          24          97.47          2.0e-09
     gi|89092528|ref|ZP_01165481.1| Transcriptional regulator, Tet;  PMID:;
     gi|89083040|gb|EAR62259.1| Transcriptional regulator, Tet;  PMID:;
167.          5          181          24          88.89          2.0e-09
     gi|77868009|gb|EAO99281.1| similar to Transcriptional reg;  PMID:;
     gi|77953056|ref|ZP_00817467.1| similar to Transcriptional reg;  PMID:;
168.          5          172          30          84.34          3.0e-09
     gi|89343855|gb|ABD68058.1| transcriptional regulator, Tet;  PMID:;
     gi|89899118|ref|YP_521589.1| transcriptional regulator, Tet;  PMID:;
169.          5          175          30          85.86          3.0e-09
     gi|84317481|ref|ZP_00965924.1| COG1309: Transcriptional regul;  PMID:;
     gi|9951100|gb|AAG08216.1| probable transcriptional regul;  PMID:;
     gi|15600024|ref|NP_253518.1| probable transcriptional regul;  PMID:;
170.          5          175          30          85.86          3.0e-09
     gi|49082604|gb|AAT50702.1| PA4831 [synthetic construct] ;  PMID:;
171.          5          175          30          85.86          3.0e-09
     gi|13022203|gb|AAK11694.1| putative regulator [Enterobact;  PMID:;
172.          5          175          29          85.86          3.0e-09
     gi|84323508|ref|ZP_00971577.1| COG1309: Transcriptional regul;  PMID:;
173.          3          195          28          96.97          3.0e-09
174.          5          175          28          85.86          3.0e-09
     gi|77972046|ref|ZP_00827629.1| COG1309: Transcriptional regul;  PMID:;
175.          7          191          25          92.93          3.0e-09
     gi|21224586|ref|NP_630365.1| gamma-butyrolactone binding pr;  PMID:12000953,8843436;
     gi|3425861|emb|CAA07628.1| gamma-butyrolactone binding pr;  PMID:;
     gi|6273670|emb|CAB60184.1| gamma-butyrolactone binding pr;  PMID:12000953;
176.          3          162          25          80.30          3.0e-09
     gi|24413880|emb|CAD55220.1| putative tetR-family transcrip;  PMID:;
     gi|32141251|ref|NP_733652.1| tetR-family transcriptional re;  PMID:;
177.          6          196          24          95.96          3.0e-09
     gi|28852204|gb|AAO55278.1| transcriptional regulator, Tet;  PMID:;
     gi|28868964|ref|NP_791583.1| transcriptional regulator, Tet;  PMID:;
178.          1          155          23          77.78          3.0e-09
     gi|88820155|gb|EAR29968.1| TetR family transcriptional re;  PMID:;
     gi|88858538|ref|ZP_01133180.1| TetR family transcriptional re;  PMID:;
179.          1          173          30          86.87          5.0e-09
     gi|91779643|ref|YP_554851.1| Transcriptional regulator, Tet;  PMID:;
     gi|91692303|gb|ABE35501.1| Transcriptional regulator, Tet;  PMID:;
180.          11          166          28          78.28          5.0e-09
     gi|89158116|gb|EAR78106.1| regulatory protein, TetR [Baci;  PMID:;
     gi|89203985|ref|ZP_01182564.1| regulatory protein, TetR [Baci;  PMID:;
181.          4          148          28          72.73          5.0e-09
     gi|33573359|emb|CAE37343.1| probable TetR-family transcrip;  PMID:;
     gi|33596658|ref|NP_884301.1| probable TetR-family transcrip;  PMID:;
182.          4          148          28          72.73          5.0e-09
     gi|33571882|emb|CAE41398.1| probable TetR-family transcrip;  PMID:;
     gi|33575709|emb|CAE32787.1| probable TetR-family transcrip;  PMID:;
     gi|33592237|ref|NP_879881.1| probable TetR-family transcrip;  PMID:;
     gi|33601274|ref|NP_888834.1| probable TetR-family transcrip;  PMID:;
183.          8          191          27          92.42          5.0e-09
     gi|72384091|ref|YP_293445.1| regulatory protein, TetR [Rals;  PMID:;
     gi|72123434|gb|AAZ65588.1| regulatory protein, TetR [Rals;  PMID:;
184.          6          177          27          86.36          5.0e-09
     gi|77384261|gb|ABA75774.1| Transcriptional Regulator, Tet;  PMID:;
     gi|77460258|ref|YP_349765.1| Transcriptional Regulator, Tet;  PMID:;
185.          3          183          22          90.91          5.0e-09
     gi|47574422|ref|ZP_00244458.1| COG1309: Transcriptional regul;  PMID:;
186.          8          193          20          93.43          5.0e-09
     gi|89335573|dbj|BAE85168.1| hypothetical protein [Desulfit;  PMID:;
     gi|89896125|ref|YP_519612.1| hypothetical protein DSY3379 [;  PMID:;
187.          2          192          19          95.96          5.0e-09
     gi|83953317|ref|ZP_00962039.1| Transcriptional regulator, Tet;  PMID:;
     gi|83842285|gb|EAP81453.1| Transcriptional regulator, Tet;  PMID:;
188.          5          172          30          84.34          6.0e-09
     gi|77979002|ref|ZP_00834424.1| COG1309: Transcriptional regul;  PMID:;
189.          5          169          28          82.83          6.0e-09
     gi|98660594|dbj|GAA02175.1| unnamed protein product [Pelot;  PMID:;
190.          3          166          28          82.32          6.0e-09
     gi|82735417|ref|ZP_00898280.1| hypothetical protein PputDRAFT;  PMID:;
     gi|82718092|gb|EAP53143.1| hypothetical protein PputDRAFT;  PMID:;
191.          23          180          28          79.29          6.0e-09
     gi|84352951|ref|ZP_00977893.1| COG1309: Transcriptional regul;  PMID:;
192.          7          170          28          82.32          6.0e-09
     gi|77019602|dbj|BAE45978.1| putative transcriptional regul;  PMID:;
     gi|77454602|ref|YP_345470.1| putative transcriptional regul;  PMID:;
193.          3          166          28          82.32          6.0e-09
     gi|11138238|dbj|BAB17786.1| CymR [Pseudomonas putida] ;  PMID:;
     gi|2228231|gb|AAB62296.1| CymR [Pseudomonas putida] ;  PMID:;
194.          3          188          26          93.43          6.0e-09
     gi|69302108|ref|ZP_00623204.1| regulatory protein, TetR [Sili;  PMID:;
195.          11          183          26          86.87          6.0e-09
     gi|92913009|ref|ZP_01281638.1| regulatory protein, TetR [Myco;  PMID:;
     gi|92442271|gb|EAT00109.1| regulatory protein, TetR [Myco;  PMID:;
196.          3          188          26          93.43          6.0e-09
     gi|99081803|ref|YP_613957.1| transcriptional regulator, Tet;  PMID:;
     gi|99038083|gb|ABF64695.1| transcriptional regulator, Tet;  PMID:;
197.          1          162          23          81.31          6.0e-09
     gi|90588681|ref|ZP_01244332.1| regulatory protein, TetR [Flav;  PMID:;
     gi|90435143|gb|EAS60501.1| regulatory protein, TetR [Flav;  PMID:;
198.          5          181          23          88.89          6.0e-09
     gi|35214399|dbj|BAC91767.1| TetR family transcriptional re;  PMID:;
     gi|37523395|ref|NP_926772.1| TetR family transcriptional re;  PMID:;
199.          8          193          20          93.43          6.0e-09
200.          3          182          28          90.40          8.0e-09
     gi|94312539|ref|YP_585749.1| transcriptional regulator, Tet;  PMID:;
     gi|93356391|gb|ABF10480.1| transcriptional regulator, Tet;  PMID:;
201.          3          193          27          95.96          8.0e-09
     gi|71281239|ref|YP_270059.1| transcriptional regulator, Tet;  PMID:;
     gi|71146979|gb|AAZ27452.1| transcriptional regulator, Tet;  PMID:;
202.          4          156          26          76.77          8.0e-09
     gi|98661530|dbj|GAA01461.1| unnamed protein product [Pelot;  PMID:;
203.          1          173          26          86.87          8.0e-09
     gi|82749468|ref|ZP_00911920.1| transcriptional regulator, Tet;  PMID:;
     gi|82722661|gb|EAP57458.1| transcriptional regulator, Tet;  PMID:;
204.          3          166          25          82.32          8.0e-09
     gi|71556403|gb|AAZ35614.1| transcriptional regulator, Tet;  PMID:16159782;
     gi|71735850|ref|YP_275241.1| transcriptional regulator, Tet;  PMID:16159782;
205.          3          95          35          46.46          1.0e-08
     gi|67859686|gb|EAM54752.1| regulatory protein, TetR [Soli;  PMID:;
     gi|67933060|ref|ZP_00526188.1| regulatory protein, TetR [Soli;  PMID:;
206.          10          169          30          80.30          1.0e-08
     gi|83650356|gb|ABC34420.1| transcriptional regulator, Tet;  PMID:;
     gi|83716531|ref|YP_438641.1| transcriptional regulator, Tet;  PMID:;
207.          6          180          30          87.88          1.0e-08
     gi|78512523|gb|EAP25842.1| transcriptional regulator [Bra;  PMID:;
     gi|78699569|ref|ZP_00864061.1| transcriptional regulator [Bra;  PMID:;
208.          5          172          29          84.34          1.0e-08
     gi|89080445|gb|EAR59697.1| transcriptional regulator, Tet;  PMID:;
     gi|89095282|ref|ZP_01168202.1| transcriptional regulator, Tet;  PMID:;
209.          8          172          28          82.83          1.0e-08
     gi|77967926|gb|ABB09306.1| transcriptional regulator, Tet;  PMID:;
     gi|78067181|ref|YP_369950.1| transcriptional regulator, Tet;  PMID:;
210.          3          174          28          86.36          1.0e-08
     gi|86280281|gb|ABC89344.1| probable transcriptional regul;  PMID:;
     gi|86356179|ref|YP_468071.1| probable transcriptional regul;  PMID:;
211.          7          167          26          80.81          1.0e-08
212.          9          172          25          82.32          1.0e-08
     gi|78061433|ref|YP_371341.1| transcriptional regulator, Tet;  PMID:;
     gi|77969318|gb|ABB10697.1| transcriptional regulator, Tet;  PMID:;
213.          3          166          25          82.32          1.0e-08
     gi|63257090|gb|AAY38186.1| regulatory protein, TetR [Pseu;  PMID:;
     gi|66046383|ref|YP_236224.1| regulatory protein, TetR [Pseu;  PMID:;
214.          6          172          24          83.84          1.0e-08
     gi|63257570|gb|AAY38666.1| regulatory protein, TetR [Pseu;  PMID:;
     gi|66046863|ref|YP_236704.1| regulatory protein, TetR [Pseu;  PMID:;
215.          2          181          24          90.40          1.0e-08
     gi|67084740|gb|EAM04220.1| regulatory protein, TetR [Azot;  PMID:;
     gi|67158448|ref|ZP_00419393.1| regulatory protein, TetR [Azot;  PMID:;
216.          1          185          23          92.93          1.0e-08
     gi|89347022|gb|ABD71225.1| transcriptional regulator, Tet;  PMID:;
     gi|89902285|ref|YP_524756.1| transcriptional regulator, Tet;  PMID:;
217.          6          183          30          89.39          2.0e-08
     gi|36959071|gb|AAQ87496.1| Transcriptional regulator, Tet;  PMID:;
218.          9          173          30          82.83          2.0e-08
     gi|91778952|ref|YP_554160.1| Transcriptional regulator, Tet;  PMID:;
     gi|91691612|gb|ABE34810.1| Transcriptional regulator, Tet;  PMID:;
219.          2          172          28          85.86          2.0e-08
220.          2          172          28          85.86          2.0e-08
     gi|75817195|ref|ZP_00747648.1| COG1309: Transcriptional regul;  PMID:;
221.          8          166          28          79.80          2.0e-08
     gi|17134608|dbj|BAB77166.1| transcriptional regulator [Nos;  PMID:;
     gi|17158659|ref|NP_478170.1| transcriptional regulator [Nos;  PMID:;
222.          2          172          28          85.86          2.0e-08
     gi|75825413|ref|ZP_00754849.1| COG1309: Transcriptional regul;  PMID:;
     gi|15601345|ref|NP_232976.1| hypothetical protein VCA0586 [;  PMID:;
     gi|9657997|gb|AAF96488.1| conserved hypothetical protein;  PMID:;
223.          2          172          28          85.86          2.0e-08
224.          4          172          28          84.85          2.0e-08
     gi|67544848|ref|ZP_00422774.1| regulatory protein, TetR [Burk;  PMID:;
     gi|67533907|gb|EAM30660.1| regulatory protein, TetR [Burk;  PMID:;
225.          9          172          27          82.32          2.0e-08
     gi|86751365|ref|YP_487861.1| transcriptional regulator, Tet;  PMID:;
     gi|86574393|gb|ABD08950.1| transcriptional regulator, Tet;  PMID:;
226.          3          166          27          82.32          2.0e-08
     gi|71554860|gb|AAZ34071.1| transcriptional regulator, Tet;  PMID:;
     gi|71734307|ref|YP_273967.1| transcriptional regulator, Tet;  PMID:;
227.          3          171          27          84.85          2.0e-08
     gi|41407067|ref|NP_959903.1| CprA [Mycobacterium avium subs;  PMID:;
     gi|41395418|gb|AAS03286.1| CprA [Mycobacterium avium subs;  PMID:;
228.          11          172          27          81.31          2.0e-08
     gi|85672253|gb|EAQ27110.1| hypothetical protein ROS217_21;  PMID:;
     gi|85703325|ref|ZP_01034429.1| hypothetical protein ROS217_21;  PMID:;
229.          23          183          26          80.81          2.0e-08
     gi|47574832|ref|ZP_00244867.1| COG1309: Transcriptional regul;  PMID:;
230.          7          174          25          84.34          2.0e-08
     gi|91710917|gb|ABE50845.1| transcriptional regulator, Tet;  PMID:;
     gi|91776930|ref|YP_546686.1| transcriptional regulator, Tet;  PMID:;
231.          3          166          25          82.32          2.0e-08
     gi|28870483|ref|NP_793102.1| transcriptional regulator, Tet;  PMID:;
     gi|28853730|gb|AAO56797.1| transcriptional regulator, Tet;  PMID:;
232.          14          194          25          90.91          2.0e-08
233.          8          176          25          84.85          2.0e-08
     gi|71278787|ref|YP_270662.1| transcriptional regulator, Tet;  PMID:;
     gi|71144527|gb|AAZ25000.1| transcriptional regulator, Tet;  PMID:;
234.          6          184          25          89.90          2.0e-08
     gi|69244833|ref|ZP_00603057.1| regulatory protein, TetR [Ente;  PMID:;
     gi|68196187|gb|EAN10617.1| regulatory protein, TetR [Ente;  PMID:;
235.          2          186          23          92.93          2.0e-08
236.          4          175          22          86.36          2.0e-08
     gi|24194307|gb|AAN48024.1| Transcriptional regulator, tet;  PMID:;
     gi|45658629|ref|YP_002715.1| transcriptional regulator (Tet;  PMID:;
     gi|24213525|ref|NP_711006.1| Transcriptional regulator, tet;  PMID:;
     gi|45601873|gb|AAS71352.1| transcriptional regulator (Tet;  PMID:;
237.          3          65          44          31.31          3.0e-08
     gi|3309205|gb|AAC26025.1| ThlR [Clostridium acetobutylic;  PMID:;
     gi|14994395|gb|AAK76825.1| ThlR, HTH transcriptional regu;  PMID:;
     gi|15004783|ref|NP_149243.1| ThlR, HTH transcriptional regu;  PMID:;
238.          11          166          31          78.28          3.0e-08
     gi|69285285|ref|ZP_00616851.1| regulatory protein, TetR [Kine;  PMID:;
     gi|67987626|gb|EAM75417.1| regulatory protein, TetR [Kine;  PMID:;
239.          4          160          30          78.79          3.0e-08
     gi|83721032|ref|YP_443447.1| transcriptional regulator, Tet;  PMID:;
     gi|83654857|gb|ABC38920.1| transcriptional regulator, Tet;  PMID:;
240.          5          155          29          75.76          3.0e-08
     gi|86359262|ref|YP_471154.1| probable transcriptional regul;  PMID:;
     gi|86283364|gb|ABC92427.1| probable transcriptional regul;  PMID:;
241.          4          160          28          78.79          3.0e-08
     gi|84360541|ref|ZP_00985239.1| COG1309: Transcriptional regul;  PMID:;
242.          6          173          28          84.34          3.0e-08
     gi|78516344|gb|EAP29644.1| possible transcriptional regul;  PMID:;
     gi|78695781|ref|ZP_00860292.1| possible transcriptional regul;  PMID:;
243.          8          166          28          79.80          3.0e-08
     gi|84361753|ref|ZP_00986406.1| COG1309: Transcriptional regul;  PMID:;
244.          7          181          23          87.88          3.0e-08
     gi|40787313|gb|AAR90230.1| hypothetical protein PDK3.089 ;  PMID:;
245.          8          173          30          83.33          4.0e-08
     gi|86156657|ref|YP_463442.1| transcriptional regulator, Tet;  PMID:;
     gi|85773168|gb|ABC80005.1| transcriptional regulator, Tet;  PMID:;
246.          5          164          30          80.30          4.0e-08
     gi|6459946|gb|AAF11696.1| transcriptional regulator, Tet;  PMID:10567266;
     gi|7474027|pir||G75307 transcription regulator, TetR ;  PMID:10567266;
     gi|15807142|ref|NP_295871.1| transcriptional regulator, Tet;  PMID:10567266;
247.          7          180          28          87.37          4.0e-08
     gi|20089076|ref|NP_615151.1| transcriptional regulator, Tet;  PMID:;
     gi|19913937|gb|AAM03631.1| transcriptional regulator, Tet;  PMID:;
248.          11          166          28          78.28          4.0e-08
     gi|67988698|gb|EAM76475.1| regulatory protein, TetR [Kine;  PMID:;
     gi|69283807|ref|ZP_00615897.1| regulatory protein, TetR [Kine;  PMID:;
249.          1          191          25          95.96          4.0e-08
     gi|71282227|ref|YP_268153.1| transcriptional regulator, Tet;  PMID:;
     gi|71147967|gb|AAZ28440.1| transcriptional regulator, Tet;  PMID:;
250.          5          189          24          92.93          4.0e-08
     gi|44057|emb|CAA42989.1| 23 kD protein [Lactococcus lac;  PMID:;
     gi|1176684|sp|P42097|YPB3_LACLA Putative HTH-type transcriptio;  PMID:;
     gi|1093223|prf||2103190D pbg downstream ORF 3 ;  PMID:;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

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