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   YP_001304549.1;SP13991A
Protein Sequence Comparative Analysis   (PSCA)
 
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YP_001304549.1    REFERENCE SYSTEM

Accession: YP_001304549.1
Description: gi|150009806|ref|YP_001304549.1| hypothetical protein BDI_3222 [Parabacteroides distasonis ATCC 8503]
Organism: Parabacteroides distasonis ATCC 8503
Keyword: gi|150009806|ref|YP_001304549.1| hypothetical protein BDI_3222 [Parabacteroides distasonis ATCC 8503]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:1.2e-67
    Pfam:0000.0001851   0;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          29          136          100          78.68          1.0e-57
     Pdb:4R03 CRYSTAL STRUCTURE OF A DUF3836 FAMILY PROTEIN (BDI_3222) FRO; PMID:;
2.          25          119          29          69.12          4.0e-06
     Pdb:4R8O CRYSTAL STRUCTURE OF A DUF3836 FAMILY PROTEIN (BVU_1206) FRO; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          132          30          96.32          5.0e-12
     gi|29339812|gb|AAO77607.1| hypothetical protein BT_2500 [;  PMID:12663928;
     gi|29347910|ref|NP_811413.1| hypothetical protein BT2500 [B;  PMID:;
2.          1          130          30          94.85          2.0e-11
     gi|29348668|ref|NP_812171.1| hypothetical protein BT3259 [B;  PMID:12663928;
     gi|29340573|gb|AAO78365.1| hypothetical protein BT_3259 [;  PMID:12663928;
3.          1          119          27          86.76          3.0e-11
     gi|53711381|ref|YP_097373.1| hypothetical protein BF0090 [B;  PMID:15466707;
     gi|60679699|ref|YP_209843.1| hypothetical protein BF0103 [B;  PMID:15746427;
     gi|60491133|emb|CAH05881.1| putative exported protein [Bac;  PMID:15746427;
     gi|52214246|dbj|BAD46839.1| conserved hypothetical protein;  PMID:15466707;
4.          1          134          22          97.79          5.0e-06
     gi|53714560|ref|YP_100552.1| hypothetical protein BF3274 [B;  PMID:15466707;
     gi|60494015|emb|CAH08807.1| putative exported protein [Bac;  PMID:15746427;
     gi|52217425|dbj|BAD50018.1| conserved hypothetical protein;  PMID:15466707;
     gi|60682581|ref|YP_212725.1| hypothetical protein BF3112 [B;  PMID:;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

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