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   TM0037;TM0037
 Protein Sequence Comparative Analysis   (PSCA)
 
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TM0037    REFERENCE SYSTEM

Accession: TM0037
Description: Hypothetical protein TM0037.
Organism: Thermotoga maritima.
Keyword: Hypothetical protein;Complete proteome;

  
References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: Q9WXP4;  PMID:10360571;
   GenBank: AAD35131;  PMID:10360571;
Family annotation                  
1.          trusted          evalue:9.6e-30
    Pfam:PF01966   HD domain;  PMID:9868367;
2.          trusted          evalue:9.9e-26
    Pfam:BIG_264   0;  PMID:;
3.          trusted          evalue:1.0e-27
    Pfam:v3_1_0:1xx7E00   0;  PMID:;
4.          trusted          evalue:4.3e-04
    Pfam:v3_1_0:1vqrC00   0;  PMID:;
5.          trusted or gathering
    InterPro:IPR006674   HD;  PMID:9868367;
6.          trusted or gathering
    InterPro:IPR003607   Met_phos_hydro;  PMID:9868367;
7.          trusted or gathering
    InterPro:IPR006675   Unchar_HDIG;  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          416          100          99.76          0.0e+00
     gi|4980522|gb|AAD35131.1| conserved hypothetical protein;  PMID:10360571;
     gi|15642812|ref|NP_227853.1| conserved hypothetical protein;  PMID:10360571;
     gi|7462154|pir||B72425 conserved hypothetical protein;  PMID:10360571;
2.          3          383          27          91.35          3.0e-85
     gi|27365610|ref|NP_761138.1| HDIG domain protein [Vibrio vu;  PMID:;
     gi|27361758|gb|AAO10665.1| HDIG domain protein [Vibrio vu;  PMID:;
3.          1          409          24          98.08          1.0e-76
     gi|23001949|ref|ZP_00045741.1| hypothetical protein [Magnetoc;  PMID:;
4.          10          382          23          89.42          4.0e-75
     gi|22999665|ref|ZP_00043633.1| hypothetical protein [Magnetoc;  PMID:;
5.          1          392          20          93.99          4.0e-67
6.          6          404          22          95.67          2.0e-66
     gi|23054915|ref|ZP_00081052.1| hypothetical protein [Geobacte;  PMID:;
7.          18          386          31          88.46          6.0e-40
     gi|89210887|ref|ZP_01189270.1| Metal-dependent phosphohydrola;  PMID:;
     gi|89159527|gb|EAR79192.1| Metal-dependent phosphohydrola;  PMID:;
8.          8          163          20          37.26          2.0e-39
     gi|23022170|ref|ZP_00061795.1| hypothetical protein [Clostrid;  PMID:;
9.          8          180          18          41.35          4.0e-38
     gi|23054306|ref|ZP_00080473.1| hypothetical protein [Geobacte;  PMID:;
10.          8          175          16          40.14          8.0e-38
     gi|23017178|ref|ZP_00056913.1| hypothetical protein [Thermobi;  PMID:;
11.          5          381          29          90.38          2.0e-37
     gi|78045121|ref|YP_360724.1| HD domain protein [Carboxydoth;  PMID:;
     gi|77997236|gb|ABB16135.1| HD domain protein [Carboxydoth;  PMID:;
12.          2          175          21          41.59          3.0e-37
     gi|23113712|ref|ZP_00099065.1| hypothetical protein [Desulfit;  PMID:;
13.          2          178          16          42.31          3.0e-37
     gi|29606686|dbj|BAC70747.1| hypothetical protein [Streptom;  PMID:11572948,12692562;
     gi|29829578|ref|NP_824212.1| hypothetical protein SAV3036 [;  PMID:11572948;
14.          8          173          22          39.66          2.0e-36
     gi|23055278|ref|ZP_00081393.1| hypothetical protein [Geobacte;  PMID:;
15.          2          175          16          41.59          3.0e-36
     gi|8546884|emb|CAB94603.1| putative integral membrane pro;  PMID:12000953;
     gi|21223586|ref|NP_629365.1| integral membrane protein [Str;  PMID:12000953,8843436;
16.          18          389          30          89.18          7.0e-36
     gi|75857065|ref|ZP_00764684.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
17.          11          169          18          37.98          8.0e-36
     gi|22971337|ref|ZP_00018306.1| hypothetical protein [Chlorofl;  PMID:;
18.          11          391          30          91.35          9.0e-36
     gi|77996244|gb|ABB15143.1| HDIG domain protein [Carboxydo;  PMID:;
     gi|78044129|ref|YP_361235.1| HDIG domain protein [Carboxydo;  PMID:;
19.          8          166          20          37.98          3.0e-35
     gi|23014000|ref|ZP_00053842.1| COG2206: HD-GYP domain [Magnet;  PMID:;
20.          1          175          20          41.83          7.0e-35
     gi|22971437|ref|ZP_00018395.1| hypothetical protein [Chlorofl;  PMID:;
21.          3          379          28          90.38          8.0e-35
     gi|50877146|emb|CAG36986.1| hypothetical protein [Desulfot;  PMID:;
     gi|51246109|ref|YP_065993.1| hypothetical protein DP2257 [D;  PMID:;
22.          3          175          15          41.35          8.0e-35
     gi|22973037|ref|ZP_00019883.1| hypothetical protein [Chlorofl;  PMID:;
23.          18          379          31          86.78          1.0e-34
     gi|20806580|ref|NP_621751.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
     gi|20515022|gb|AAM23355.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
24.          1          167          20          39.90          1.0e-34
     gi|7444068|pir||E72408 response regulator - Thermotog;  PMID:10360571;
     gi|15642960|ref|NP_228001.1| response regulator [Thermotoga;  PMID:10360571;
     gi|4980682|gb|AAD35279.1| response regulator [Thermotoga;  PMID:10360571;
25.          8          172          17          39.42          1.0e-34
     gi|7471307|pir||A75484 conserved hypothetical protein;  PMID:10567266;
     gi|15805745|ref|NP_294442.1| hypothetical protein DR0719 [D;  PMID:10567266;
     gi|6458426|gb|AAF10297.1| conserved hypothetical protein;  PMID:10567266;
26.          18          389          30          89.18          3.0e-34
     gi|91223812|ref|ZP_01259076.1| hypothetical protein V12G01_18;  PMID:;
     gi|91191304|gb|EAS77569.1| hypothetical protein V12G01_18;  PMID:;
27.          14          173          13          38.22          3.0e-34
     gi|15643926|ref|NP_228975.1| ABC transporter, periplasmic s;  PMID:10360571;
     gi|4981719|gb|AAD36245.1| ABC transporter, periplasmic s;  PMID:10360571;
     gi|7462043|pir||E72285 ABC transporter, periplasmic s;  PMID:10360571;
28.          15          383          30          88.46          4.0e-34
     gi|88923557|gb|EAR42583.1| Metal-dependent phosphohydrola;  PMID:;
     gi|88946959|ref|ZP_01150020.1| Metal-dependent phosphohydrola;  PMID:;
29.          2          167          17          39.66          6.0e-34
     gi|23121759|ref|ZP_00103955.1| hypothetical protein [Desulfit;  PMID:;
30.          4          171          16          40.14          6.0e-34
     gi|23022757|ref|ZP_00062268.1| hypothetical protein [Clostrid;  PMID:;
31.          18          382          31          87.50          1.0e-33
     gi|28898197|ref|NP_797802.1| hypothetical protein VP1423 [V;  PMID:12620739,10834969;
     gi|28806414|dbj|BAC59686.1| conserved hypothetical protein;  PMID:10834969,12620739;
32.          3          391          26          93.27          6.0e-33
     gi|11354806|pir||G82430 conserved hypothetical protein;  PMID:10952301;
     gi|15601438|ref|NP_233069.1| hypothetical protein VCA0681 [;  PMID:10952301;
     gi|9658098|gb|AAF96581.1| conserved hypothetical protein;  PMID:10952301;
33.          1          169          19          40.38          7.0e-33
     gi|23020121|ref|ZP_00059827.1| hypothetical protein [Clostrid;  PMID:;
34.          1          166          16          39.66          9.0e-33
     gi|22962143|ref|ZP_00009749.1| hypothetical protein [Rhodopse;  PMID:;
35.          2          172          19          40.87          1.0e-32
     gi|7471699|pir||G75567 conserved hypothetical protein;  PMID:10567266;
     gi|15805080|ref|NP_293765.1| hypothetical protein DR0039 [D;  PMID:10567266;
     gi|6457698|gb|AAF09630.1| conserved hypothetical protein;  PMID:10567266;
36.          15          386          31          89.18          2.0e-32
     gi|98660912|dbj|GAA01942.1| unnamed protein product [Pelot;  PMID:;
37.          22          395          27          89.66          2.0e-32
     gi|75825496|ref|ZP_00754932.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
38.          22          391          27          88.70          2.0e-32
     gi|75831690|ref|ZP_00760951.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
39.          1          188          18          44.95          2.0e-32
     gi|22973108|ref|ZP_00019951.1| hypothetical protein [Chlorofl;  PMID:;
40.          8          169          20          38.70          3.0e-32
41.          11          373          28          87.02          4.0e-32
     gi|77995555|gb|ABB14454.1| HDIG domain protein [Carboxydo;  PMID:;
     gi|78043440|ref|YP_359007.1| HDIG domain protein [Carboxydo;  PMID:;
42.          8          169          20          38.70          4.0e-32
     gi|21398922|ref|NP_654907.1| HDc, Metal dependent phosphohy;  PMID:12004073;
43.          15          407          28          94.23          5.0e-32
     gi|78356436|ref|YP_387885.1| metal dependent phosphohydrola;  PMID:;
     gi|78218841|gb|ABB38190.1| metal dependent phosphohydrola;  PMID:;
44.          27          391          27          87.50          5.0e-32
     gi|75818864|ref|ZP_00748980.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
45.          22          391          27          88.70          8.0e-32
     gi|75824126|ref|ZP_00753591.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
46.          2          166          17          39.42          9.0e-32
     gi|23055031|ref|ZP_00081160.1| hypothetical protein [Geobacte;  PMID:;
47.          18          386          30          88.46          1.0e-31
     gi|46579385|ref|YP_010193.1| HD domain protein [Desulfovibr;  PMID:;
     gi|46448799|gb|AAS95452.1| HD domain protein [Desulfovibr;  PMID:;
48.          15          174          19          38.22          1.0e-31
     gi|20807511|ref|NP_622682.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
     gi|20516042|gb|AAM24286.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
49.          18          386          28          88.46          2.0e-31
     gi|71491099|gb|EAO23435.1| Metal-dependent phosphohydrola;  PMID:;
50.          18          387          27          88.70          2.0e-31
     gi|25496949|pir||B97249 fusion HD-GYP domain and HD-hy;  PMID:11466286;
     gi|15896092|ref|NP_349441.1| Fusion HD-GYP domain and HD-hy;  PMID:11466286;
     gi|15025881|gb|AAK80781.1| Fusion HD-GYP domain and HD-hy;  PMID:11466286;
51.          1          175          25          41.83          2.0e-31
     gi|4981264|gb|AAD35820.1| hypothetical protein TM_0739 [;  PMID:10360571;
     gi|7462648|pir||F72339 hypothetical protein - Thermot;  PMID:10360571;
     gi|15643502|ref|NP_228548.1| hypothetical protein TM0739 [T;  PMID:10360571;
52.          8          169          16          38.70          2.0e-31
     gi|24373913|ref|NP_717956.1| response regulator [Shewanella;  PMID:12368813;
     gi|24348338|gb|AAN55400.1| response regulator [Shewanella;  PMID:12368813;
53.          18          409          27          93.99          3.0e-31
     gi|82748008|ref|ZP_00910499.1| Metal-dependent phosphohydrola;  PMID:;
54.          18          379          27          86.78          9.0e-31
     gi|95930384|ref|ZP_01313121.1| metal dependent phosphohydrola;  PMID:;
     gi|95133636|gb|EAT15298.1| metal dependent phosphohydrola;  PMID:;
55.          6          169          22          39.18          1.0e-30
     gi|15894140|ref|NP_347489.1| HD superfamily hydrolase (HD-G;  PMID:11466286;
     gi|15023746|gb|AAK78829.1| HD superfamily hydrolase (HD-G;  PMID:11466286;
     gi|25496679|pir||B97005 HD superfamily hydrolase (HD-G;  PMID:11466286;
56.          8          382          28          89.90          2.0e-30
     gi|82400943|gb|EAP41787.1| HDIG [Caldicellulosiruptor sac;  PMID:;
     gi|82501065|ref|ZP_00886442.1| HDIG [Caldicellulosiruptor sac;  PMID:;
57.          15          165          19          36.06          3.0e-30
58.          1          165          16          39.42          3.0e-30
     gi|23101879|ref|ZP_00088424.1| hypothetical protein [Azotobac;  PMID:;
59.          2          171          19          40.62          4.0e-30
     gi|23021391|ref|ZP_00061068.1| hypothetical protein [Clostrid;  PMID:;
60.          11          230          15          52.64          9.0e-30
     gi|15808001|ref|NP_285665.1| GGDEF family protein [Deinococ;  PMID:10567266;
     gi|6460735|gb|AAF12440.1| GGDEF family protein [Deinococ;  PMID:10567266;
     gi|7471918|pir||B75589 GGDEF family protein - Deinoco;  PMID:10567266;
61.          18          389          27          89.18          1.0e-29
     gi|84387521|ref|ZP_00990539.1| hypothetical protein V12B01_11;  PMID:;
     gi|84377569|gb|EAP94434.1| hypothetical protein V12B01_11;  PMID:;
62.          1          167          18          39.90          2.0e-29
     gi|23000648|ref|ZP_00044573.1| hypothetical protein [Magnetoc;  PMID:;
63.          18          385          27          88.22          4.0e-29
     gi|24374997|ref|NP_719040.1| HDIG domain protein [Shewanell;  PMID:12368813;
     gi|24349729|gb|AAN56484.1| HDIG domain protein [Shewanell;  PMID:12368813;
64.          8          170          15          38.94          5.0e-29
     gi|21290146|gb|EAA02291.1| ENSANGP00000001707 [Anopheles ;  PMID:;
     gi|31195051|ref|XP_306473.1| ENSANGP00000001707 [Anopheles ;  PMID:;
65.          5          162          18          37.74          6.0e-29
     gi|15607008|ref|NP_214390.1| hypothetical protein aq_2027 [;  PMID:9537320;
     gi|3915511|sp|O67821|Y2027_AQUAE Hypothetical protein aq_2027 ;  PMID:9537320;
     gi|2984261|gb|AAC07788.1| hypothetical protein aq_2027 [;  PMID:9537320;
     gi|7514491|pir||A70474 conserved hypothetical protein;  PMID:9537320;
66.          18          382          0          87.50          6.0e-29
     gi|91204327|emb|CAJ71980.1| conserved hypothetical protein;  PMID:;
67.          155          386          37          55.53          8.0e-29
     gi|90337730|gb|EAS51381.1| HD-GYP domain [Aurantimonas sp;  PMID:;
     gi|90418058|ref|ZP_01225970.1| HD-GYP domain [Aurantimonas sp;  PMID:;
68.          18          391          0          89.66          8.0e-29
     gi|89335419|dbj|BAE85014.1| hypothetical protein [Desulfit;  PMID:;
     gi|89895971|ref|YP_519458.1| hypothetical protein DSY3225 [;  PMID:;
69.          17          362          27          82.93          1.0e-28
     gi|68206176|ref|ZP_00558368.1| Uncharacterized HDIG domain [D;  PMID:;
70.          18          382          26          87.50          1.0e-28
     gi|27359216|gb|AAO08161.1| HD-GYP domain [Vibrio vulnific;  PMID:;
     gi|27367644|ref|NP_763171.1| HD-GYP domain [Vibrio vulnific;  PMID:;
71.          82          392          32          74.52          2.0e-28
     gi|82402590|gb|EAP43365.1| Metal-dependent phosphohydrola;  PMID:;
     gi|82499362|ref|ZP_00884808.1| Metal-dependent phosphohydrola;  PMID:;
72.          18          385          27          88.22          2.0e-28
     gi|78692158|ref|ZP_00856726.1| HDIG [Shewanella sp. MR-7] ;  PMID:;
73.          18          397          27          91.11          2.0e-28
     gi|82497556|ref|ZP_00883089.1| HDIG [Shewanella sp. MR-4] ;  PMID:;
74.          1          162          17          38.70          5.0e-28
     gi|22999845|ref|ZP_00043805.1| hypothetical protein [Magnetoc;  PMID:;
75.          13          386          0          89.66          9.0e-28
     gi|86145715|ref|ZP_01064044.1| hypothetical protein MED222_03;  PMID:;
     gi|85836414|gb|EAQ54543.1| hypothetical protein MED222_03;  PMID:;
76.          18          385          27          88.22          2.0e-27
     gi|78685781|ref|ZP_00850556.1| HDIG [Shewanella sp. ANA-3] ;  PMID:;
77.          3          171          14          40.38          3.0e-27
     gi|28056392|gb|AAO28285.1| response regulator [Xylella fa;  PMID:12533478;
     gi|28198322|ref|NP_778636.1| response regulator [Xylella fa;  PMID:12533478;
78.          1          167          15          39.90          4.0e-27
     gi|34483754|emb|CAE10751.1| SIGNAL TRANSDUCTION RESPONSE R;  PMID:;
     gi|34558036|ref|NP_907851.1| SIGNAL TRANSDUCTION RESPONSE R;  PMID:;
79.          3          171          14          40.38          4.0e-27
     gi|22995312|ref|ZP_00039791.1| hypothetical protein [Xylella ;  PMID:;
80.          11          167          14          37.50          4.0e-27
     gi|22999373|ref|ZP_00043357.1| hypothetical protein [Magnetoc;  PMID:;
81.          1          167          18          39.90          5.0e-27
     gi|24350350|gb|AAN56977.1| response regulator [Shewanella;  PMID:12368813;
     gi|24375490|ref|NP_719533.1| response regulator [Shewanella;  PMID:12368813;
82.          3          171          14          40.38          5.0e-27
     gi|9106070|gb|AAF83923.1| two-component system, regulato;  PMID:10910347;
     gi|11362786|pir||F82721 two-component system, regulato;  PMID:;
     gi|15837715|ref|NP_298403.1| two-component system, regulato;  PMID:10910347;
83.          3          171          14          40.38          6.0e-27
     gi|22997211|ref|ZP_00041446.1| hypothetical protein [Xylella ;  PMID:;
84.          125          387          29          62.98          8.0e-27
     gi|77996915|gb|ABB15814.1| HD domain protein [Carboxydoth;  PMID:;
     gi|78044800|ref|YP_359731.1| HD domain protein [Carboxydoth;  PMID:16311624;
85.          179          363          37          44.23          2.0e-26
     gi|88937299|ref|ZP_01142874.1| HDIG [Geobacter uraniumreducen;  PMID:;
     gi|88915959|gb|EAR35203.1| HDIG [Geobacter uraniumreducen;  PMID:;
86.          5          165          16          38.46          2.0e-26
     gi|24372965|ref|NP_717007.1| HD domain protein [Shewanella ;  PMID:12368813;
     gi|24347111|gb|AAN54452.1| HD domain protein [Shewanella ;  PMID:12368813;
87.          22          384          28          87.02          3.0e-26
     gi|46580955|ref|YP_011763.1| HD domain protein [Desulfovibr;  PMID:;
     gi|46450375|gb|AAS97023.1| HD domain protein [Desulfovibr;  PMID:;
88.          6          385          26          91.11          3.0e-26
     gi|83313326|ref|YP_423590.1| HD-GYP domain [Magnetospirillu;  PMID:;
     gi|82948167|dbj|BAE53031.1| HD-GYP domain [Magnetospirillu;  PMID:;
89.          13          409          26          95.19          4.0e-26
     gi|68246319|gb|EAN28420.1| Metal-dependent phosphohydrola;  PMID:;
90.          2          171          14          40.62          4.0e-26
91.          3          165          14          38.94          5.0e-26
     gi|32470755|ref|NP_863748.1| response regulator [Rhodopirel;  PMID:12835416;
     gi|32442900|emb|CAD71419.1| response regulator [Rhodopirel;  PMID:12835416;
92.          17          367          29          84.13          7.0e-26
     gi|77684946|ref|ZP_00800361.1| HDIG [Alkaliphilus metalliredi;  PMID:;
     gi|77639234|gb|EAO81607.1| HDIG [Alkaliphilus metalliredi;  PMID:;
93.          1          166          14          39.66          7.0e-26
     gi|27361721|gb|AAO10628.1| Conserved hypothetical protein;  PMID:;
     gi|27365573|ref|NP_761101.1| hypothetical protein VV12249 [;  PMID:;
94.          3          178          19          42.07          8.0e-26
     gi|7470113|pir||S74811 hypothetical protein sll1624 -;  PMID:8905231;
     gi|1652854|dbj|BAA17772.1| regulatory components of senso;  PMID:8590279,8905231;
     gi|16330364|ref|NP_441092.1| regulatory components of senso;  PMID:8905231,8590279;
95.          211          398          37          44.95          9.0e-26
     gi|94269200|ref|ZP_01291396.1| Metal-dependent phosphohydrola;  PMID:;
     gi|93451305|gb|EAT02185.1| Metal-dependent phosphohydrola;  PMID:;
96.          9          171          13          38.94          1.0e-25
     gi|23474249|ref|ZP_00129543.1| hypothetical protein [Desulfov;  PMID:;
97.          217          368          0          36.30          2.0e-25
     gi|93453882|gb|EAT04240.1| Metal-dependent phosphohydrola;  PMID:;
     gi|94265603|ref|ZP_01289347.1| Metal-dependent phosphohydrola;  PMID:;
98.          203          361          40          37.98          3.0e-25
     gi|76795541|ref|ZP_00777914.1| PAS [Thermoanaerobacter ethano;  PMID:;
     gi|76589349|gb|EAO65748.1| PAS [Thermoanaerobacter ethano;  PMID:;
99.          1          166          14          39.66          3.0e-25
     gi|11354590|pir||C82217 conserved hypothetical protein;  PMID:10952301;
     gi|15641308|ref|NP_230940.1| hypothetical protein VC1295 [V;  PMID:10952301;
     gi|9655783|gb|AAF94454.1| conserved hypothetical protein;  PMID:10952301;
100.          217          362          40          34.86          4.0e-25
     gi|76258200|ref|ZP_00765856.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|76166729|gb|EAO60853.1| GAF:Metal-dependent phosphohyd;  PMID:;
101.          4          167          18          39.18          4.0e-25
     gi|17547234|ref|NP_520636.1| hypothetical protein RSc2515 [;  PMID:11823852;
     gi|17429536|emb|CAD16222.1| putative metal-dependent phosp;  PMID:11823852;
102.          4          167          16          39.18          4.0e-25
     gi|23470172|ref|ZP_00125505.1| hypothetical protein [Pseudomo;  PMID:;
103.          3          382          26          91.11          6.0e-25
     gi|71848089|gb|AAZ47585.1| HDIG [Dechloromonas aromatica ;  PMID:;
     gi|71908468|ref|YP_286055.1| HDIG [Dechloromonas aromatica ;  PMID:;
104.          2          165          15          39.18          7.0e-25
     gi|7444069|pir||S75132 sensory transduction system re;  PMID:8905231;
     gi|16330586|ref|NP_441314.1| regulatory components of senso;  PMID:8905231,8590279;
     gi|1653077|dbj|BAA17994.1| regulatory components of senso;  PMID:8590279,8905231;
105.          4          167          15          39.18          8.0e-25
     gi|28851604|gb|AAO54681.1| HDIG domain protein [Pseudomon;  PMID:12928499;
     gi|28868367|ref|NP_790986.1| HDIG domain protein [Pseudomon;  PMID:12928499;
106.          172          382          36          50.48          9.0e-25
     gi|75823831|ref|ZP_00753310.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
107.          172          382          36          50.48          1.0e-24
     gi|75817047|ref|ZP_00747502.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
     gi|75831365|ref|ZP_00760629.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
108.          172          382          36          50.48          1.0e-24
     gi|15601685|ref|NP_233316.1| hypothetical protein VCA0931 [;  PMID:10952301;
     gi|11354824|pir||C82399 conserved hypothetical protein;  PMID:10952301;
     gi|9658368|gb|AAF96828.1| conserved hypothetical protein;  PMID:10952301;
109.          170          383          34          51.20          2.0e-24
     gi|78043667|ref|YP_360788.1| HDIG domain protein [Carboxydo;  PMID:;
     gi|77995782|gb|ABB14681.1| HDIG domain protein [Carboxydo;  PMID:;
110.          1          168          17          40.14          2.0e-24
     gi|15639862|ref|NP_219312.1| hypothetical protein TP0877 [T;  PMID:9665876;
     gi|3323189|gb|AAC65840.1| conserved hypothetical protein;  PMID:9665876;
     gi|7514627|pir||C71271 conserved hypothetical protein;  PMID:9665876;
111.          2          171          15          40.62          2.0e-24
112.          9          170          14          38.70          2.0e-24
     gi|23054589|ref|ZP_00080736.1| hypothetical protein [Geobacte;  PMID:;
113.          172          382          36          50.48          4.0e-24
     gi|75825212|ref|ZP_00754648.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
114.          3          169          19          39.90          4.0e-24
     gi|21106426|gb|AAM35242.1| conserved hypothetical protein;  PMID:12024217;
     gi|21241124|ref|NP_640706.1| hypothetical protein XAC0350 [;  PMID:12024217;
115.          140          358          29          52.40          5.0e-24
     gi|77996945|gb|ABB15844.1| sensory box protein [Carboxydo;  PMID:;
     gi|78044830|ref|YP_360695.1| sensory box protein [Carboxydo;  PMID:;
116.          5          167          18          38.94          5.0e-24
     gi|23473459|ref|ZP_00128755.1| hypothetical protein [Desulfov;  PMID:;
117.          5          179          17          41.83          5.0e-24
     gi|9950310|gb|AAG07495.1| hypothetical protein PA4108 [P;  PMID:10984043;
     gi|15599303|ref|NP_252797.1| hypothetical protein PA4108 [P;  PMID:10984043;
     gi|11350100|pir||D83132 hypothetical protein PA4108 [i;  PMID:10984043;
118.          5          179          17          41.83          6.0e-24
     gi|46164673|ref|ZP_00137558.2| COG2206: HD-GYP domain [Pseudo;  PMID:;
119.          4          171          16          40.14          6.0e-24
     gi|7471534|pir||E75380 conserved hypothetical protein;  PMID:10567266;
     gi|6459329|gb|AAF11128.1| conserved hypothetical protein;  PMID:10567266;
     gi|15806574|ref|NP_295288.1| hypothetical protein DR1565 [D;  PMID:10567266;
120.          217          362          42          34.86          1.0e-23
     gi|39996110|ref|NP_952061.1| GAF domain/HD domain protein [;  PMID:;
     gi|39982875|gb|AAR34334.1| GAF domain/HD domain protein [;  PMID:;
121.          172          382          36          50.48          1.0e-23
     gi|75821046|ref|ZP_00751082.1| COG2206: HD-GYP domain [Vibrio;  PMID:;
122.          2          167          16          39.66          1.0e-23
     gi|22999287|ref|ZP_00043278.1| hypothetical protein [Magnetoc;  PMID:;
123.          1          171          15          40.87          1.0e-23
     gi|15641360|ref|NP_230992.1| response regulator [Vibrio cho;  PMID:10952301;
     gi|9655840|gb|AAF94506.1| response regulator [Vibrio cho;  PMID:10952301;
     gi|11356069|pir||G82211 response regulator VC1348 [imp;  PMID:10952301;
124.          1          166          16          39.66          2.0e-23
     gi|27358945|gb|AAO07893.1| Response regulator [Vibrio vul;  PMID:;
     gi|27367376|ref|NP_762903.1| Response regulator [Vibrio vul;  PMID:;
125.          2          166          15          39.42          2.0e-23
     gi|23000439|ref|ZP_00044370.1| hypothetical protein [Magnetoc;  PMID:;
126.          2          171          12          40.62          2.0e-23
     gi|23013425|ref|ZP_00053321.1| COG3437: Response regulator co;  PMID:;
127.          203          363          38          38.46          3.0e-23
     gi|83309652|ref|YP_419916.1| Response regulator [Magnetospi;  PMID:;
     gi|82944493|dbj|BAE49357.1| Response regulator [Magnetospi;  PMID:;
128.          216          382          37          39.90          3.0e-23
     gi|71847986|gb|AAZ47482.1| Metal-dependent phosphohydrola;  PMID:;
     gi|71908365|ref|YP_285952.1| Metal-dependent phosphohydrola;  PMID:;
129.          2          171          12          40.62          3.0e-23
     gi|23012697|ref|ZP_00052718.1| COG3437: Response regulator co;  PMID:;
130.          2          165          14          39.18          5.0e-23
     gi|27366537|ref|NP_762064.1| Response regulator [Vibrio vul;  PMID:;
     gi|27358103|gb|AAO07054.1| Response regulator [Vibrio vul;  PMID:;
131.          1          194          12          46.39          5.0e-23
     gi|23016209|ref|ZP_00055967.1| COG3437: Response regulator co;  PMID:;
132.          203          363          38          38.46          7.0e-23
     gi|46200814|ref|ZP_00056338.2| COG2206: HD-GYP domain [Magnet;  PMID:;
133.          202          386          35          44.23          7.0e-23
     gi|34103042|gb|AAQ59405.1| conserved hypothetical protein;  PMID:;
     gi|34497185|ref|NP_901400.1| hypothetical protein CV1730 [C;  PMID:;
134.          4          166          16          38.94          7.0e-23
135.          169          367          33          47.60          1.0e-22
     gi|78486250|ref|YP_392175.1| response regulator receiver (C;  PMID:;
     gi|78364536|gb|ABB42501.1| response regulator receiver (C;  PMID:;
136.          213          388          0          42.07          1.0e-22
     gi|46198937|ref|YP_004604.1| HD-hydrolase domain [Thermus t;  PMID:;
     gi|46196561|gb|AAS80977.1| HD-hydrolase domain [Thermus t;  PMID:;
137.          212          361          40          35.82          2.0e-22
     gi|89087353|gb|EAR66467.1| hypothetical protein B14911_22;  PMID:;
     gi|89097851|ref|ZP_01170738.1| hypothetical protein B14911_22;  PMID:;
138.          203          362          39          38.22          2.0e-22
     gi|4982276|gb|AAD36766.1| conserved hypothetical protein;  PMID:10360571;
     gi|15644447|ref|NP_229499.1| hypothetical protein TM1699 [T;  PMID:10360571;
     gi|7462228|pir||E72220 conserved hypothetical protein;  PMID:10360571;
139.          203          361          38          37.98          2.0e-22
     gi|20515018|gb|AAM23351.1| Response regulators consisting;  PMID:11997336;
     gi|20806576|ref|NP_621747.1| Response regulators consisting;  PMID:11997336;
140.          227          384          37          37.74          2.0e-22
     gi|82944592|dbj|BAE49456.1| Response regulator [Magnetospi;  PMID:16303747;
     gi|83309751|ref|YP_420015.1| Response regulator [Magnetospi;  PMID:;
141.          100          389          30          69.47          2.0e-22
     gi|89159695|gb|EAR79357.1| HDIG [Halothermothrix orenii H;  PMID:;
     gi|89210725|ref|ZP_01189111.1| HDIG [Halothermothrix orenii H;  PMID:;
142.          4          169          19          39.66          2.0e-22
     gi|15893569|ref|NP_346918.1| HD-GYP hydrolase domain contai;  PMID:11466286;
     gi|15023116|gb|AAK78258.1| HD-GYP hydrolase domain contai;  PMID:11466286;
     gi|25500444|pir||G96933 HD-GYP hydrolase domain contai;  PMID:11466286;
143.          15          169          15          37.02          2.0e-22
     gi|66573408|gb|AAY48818.1| two-component system regulator;  PMID:15899963;
     gi|66768076|ref|YP_242838.1| two-component system regulator;  PMID:15899963;
     gi|21113509|gb|AAM41639.1| two-component system regulator;  PMID:12024217;
     gi|21231798|ref|NP_637715.1| two-component system regulator;  PMID:12024217;
144.          203          361          40          37.98          3.0e-22
     gi|85858781|ref|YP_460983.1| HD domain / HAMP domain protei;  PMID:;
     gi|85721872|gb|ABC76815.1| HD domain / HAMP domain protei;  PMID:;
145.          213          361          38          35.58          4.0e-22
     gi|87119647|ref|ZP_01075544.1| hypothetical protein MED121_06;  PMID:;
     gi|86165123|gb|EAQ66391.1| hypothetical protein MED121_06;  PMID:;
146.          211          383          37          41.35          4.0e-22
     gi|4982032|gb|AAD36535.1| conserved hypothetical protein;  PMID:10360571;
     gi|15644216|ref|NP_229267.1| hypothetical protein TM1467 [T;  PMID:10360571;
     gi|7462194|pir||D72252 conserved hypothetical protein;  PMID:10360571;
147.          11          166          15          37.26          5.0e-22
     gi|23013115|ref|ZP_00053056.1| hypothetical protein [Magnetos;  PMID:;
148.          217          380          36          39.18          6.0e-22
     gi|32471581|ref|NP_864574.1| conserved hypothetical protein;  PMID:12835416;
     gi|32443422|emb|CAD72255.1| conserved hypothetical protein;  PMID:12835416;
149.          195          361          35          39.90          6.0e-22
     gi|71491214|gb|EAO23546.1| HDIG [Syntrophomonas wolfei su;  PMID:;
150.          5          167          15          38.94          7.0e-22
     gi|23475257|ref|ZP_00130546.1| hypothetical protein [Desulfov;  PMID:;
151.          206          387          33          43.51          8.0e-22
     gi|7462243|pir||E72291 conserved hypothetical protein;  PMID:10360571;
     gi|4981692|gb|AAD36221.1| conserved hypothetical protein;  PMID:10360571;
     gi|15643902|ref|NP_228951.1| hypothetical protein TM1145 [T;  PMID:10360571;
152.          3          169          19          39.90          8.0e-22
     gi|66572037|gb|AAY47447.1| conserved hypothetical protein;  PMID:;
     gi|21111326|gb|AAM39669.1| conserved hypothetical protein;  PMID:12024217;
     gi|21229828|ref|NP_635745.1| hypothetical protein XCC0350 [;  PMID:12024217;
     gi|66766705|ref|YP_241467.1| hypothetical protein XC_0362 [;  PMID:;
153.          13          174          16          38.70          9.0e-22
     gi|25491044|pir||B84124 hypothetical protein BH3794 [i;  PMID:11058132;
     gi|10176419|dbj|BAB07513.1| BH3794 [Bacillus halodurans C-;  PMID:10086841,10086842,10192928,10484179,10427704,10805564,10972189,11058132;
     gi|15616356|ref|NP_244661.1| hypothetical protein BH3794 [B;  PMID:11058132,10972189,10805564,10484179,10427704,10192928,10086842,10086841;
154.          220          364          41          34.62          1.0e-21
     gi|69951524|ref|ZP_00639233.1| Response regulator receiver:Me;  PMID:;
155.          207          361          38          37.02          1.0e-21
     gi|77995079|gb|ABB13978.1| HD domain protein [Carboxydoth;  PMID:;
     gi|78042964|ref|YP_358975.1| HD domain protein [Carboxydoth;  PMID:;
156.          187          368          32          43.51          1.0e-21
     gi|94970362|ref|YP_592410.1| metal dependent phosphohydrola;  PMID:;
     gi|94552412|gb|ABF42336.1| metal dependent phosphohydrola;  PMID:;
157.          193          406          31          51.20          1.0e-21
     gi|23016756|ref|ZP_00056509.1| COG3437: Response regulator co;  PMID:;
158.          14          181          17          40.14          1.0e-21
     gi|1075506|pir||S50154 hypothetical protein 2 - Wolin;  PMID:7851379;
     gi|2126438|pir||S67487 hypothetical protein 2 - Wolin;  PMID:7851379;
     gi|558266|emb|CAA57301.1| orf [Wolinella succinogenes] ;  PMID:7851379;
159.          217          364          39          35.34          2.0e-21
     gi|94968207|ref|YP_590255.1| metal dependent phosphohydrola;  PMID:;
     gi|94550257|gb|ABF40181.1| metal dependent phosphohydrola;  PMID:;
160.          217          363          38          35.10          2.0e-21
     gi|87285908|gb|EAQ77821.1| hypothetical protein DSM3645_0;  PMID:;
     gi|87311328|ref|ZP_01093449.1| hypothetical protein DSM3645_0;  PMID:;
161.          217          386          37          40.62          2.0e-21
     gi|86557150|gb|ABD02107.1| response regulator [Synechococ;  PMID:;
     gi|86608608|ref|YP_477370.1| response regulator [Synechococ;  PMID:;
162.          194          367          35          41.59          2.0e-21
     gi|71491316|gb|EAO23645.1| HDIG [Syntrophomonas wolfei su;  PMID:;
163.          204          393          32          45.43          2.0e-21
     gi|34495814|ref|NP_900029.1| hypothetical protein CV0359 [C;  PMID:;
     gi|34101669|gb|AAQ58037.1| conserved hypothetical protein;  PMID:;
164.          15          169          15          37.02          2.0e-21
     gi|21108756|gb|AAM37344.1| two-component system regulator;  PMID:12024217;
     gi|21243226|ref|NP_642808.1| two-component system regulator;  PMID:12024217;
165.          204          362          39          37.98          3.0e-21
     gi|68519937|gb|EAN43455.1| CBS:GAF:Metal-dependent phosph;  PMID:;
     gi|68542344|ref|ZP_00582076.1| CBS:GAF:Metal-dependent phosph;  PMID:;
166.          217          372          39          37.26          3.0e-21
     gi|67873294|ref|ZP_00503573.1| Metal-dependent phosphohydrola;  PMID:;
     gi|67851690|gb|EAM47253.1| Metal-dependent phosphohydrola;  PMID:;
167.          209          358          38          35.82          3.0e-21
     gi|88918232|gb|EAR37413.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|88934967|ref|ZP_01140605.1| GAF:Metal-dependent phosphohyd;  PMID:;
168.          9          351          27          82.21          3.0e-21
     gi|15895797|ref|NP_349146.1| HD_GYP hydrolase domain fused ;  PMID:11466286;
     gi|25497592|pir||C97212 HD_GYP hydrolase domain fused ;  PMID:11466286;
     gi|15025557|gb|AAK80486.1| HD_GYP hydrolase domain fused ;  PMID:11466286;
169.          9          362          25          84.86          3.0e-21
     gi|82746187|ref|ZP_00908695.1| HD_GYP hydrolase domain fused ;  PMID:;
170.          13          169          15          37.50          4.0e-21
     gi|15023334|gb|AAK78455.1| HD-GYP domain [Clostridium ace;  PMID:11466286;
     gi|25498084|pir||D96958 HD-GYP domain [imported] - Clo;  PMID:11466286;
     gi|15893766|ref|NP_347115.1| HD-GYP domain [Clostridium ace;  PMID:11466286;
171.          5          209          14          49.04          4.0e-21
172.          204          362          38          37.98          5.0e-21
     gi|82740431|ref|ZP_00903171.1| HDIG [Shewanella sp. W3-18-1] ;  PMID:;
173.          204          362          38          37.98          5.0e-21
     gi|77814786|ref|ZP_00814039.1| HDIG [Shewanella putrefaciens ;  PMID:;
     gi|77810193|gb|EAO94576.1| HDIG [Shewanella putrefaciens ;  PMID:;
174.          169          367          35          47.60          5.0e-21
     gi|84385139|ref|ZP_00988171.1| response regulator/phosphatase;  PMID:;
     gi|84379736|gb|EAP96587.1| response regulator/phosphatase;  PMID:;
175.          206          355          39          35.82          6.0e-21
     gi|69949550|ref|ZP_00637547.1| CBS:Metal-dependent phosphohyd;  PMID:;
176.          217          385          35          40.38          6.0e-21
     gi|76797504|ref|ZP_00779813.1| HDIG [Thermoanaerobacter ethan;  PMID:;
     gi|76587134|gb|EAO63597.1| HDIG [Thermoanaerobacter ethan;  PMID:;
177.          211          361          35          36.06          6.0e-21
     gi|89098410|ref|ZP_01171294.1| Response regulators consisting;  PMID:;
     gi|89086959|gb|EAR66076.1| Response regulators consisting;  PMID:;
178.          217          391          34          41.83          6.0e-21
     gi|67848642|gb|EAM44321.1| GGDEF [Clostridium thermocellu;  PMID:;
     gi|67917405|ref|ZP_00511037.1| GGDEF [Clostridium thermocellu;  PMID:;
179.          203          361          39          37.98          8.0e-21
     gi|56380218|dbj|BAD76126.1| hypothetical conserved protein;  PMID:;
     gi|56420376|ref|YP_147694.1| hypothetical protein GK1841 [G;  PMID:15576355;
180.          217          367          38          36.06          8.0e-21
     gi|86556938|gb|ABD01895.1| response regulator [Synechococ;  PMID:;
     gi|86608396|ref|YP_477158.1| response regulator [Synechococ;  PMID:;
181.          224          364          38          33.65          8.0e-21
     gi|23015107|ref|ZP_00054894.1| COG3437: Response regulator co;  PMID:;
182.          203          364          36          38.70          8.0e-21
     gi|78684645|ref|ZP_00849428.1| Response regulator receiver:Me;  PMID:;
     gi|78507582|gb|EAP21092.1| Response regulator receiver:Me;  PMID:;
183.          203          364          35          38.70          8.0e-21
     gi|78688821|ref|ZP_00853488.1| Response regulator receiver:Me;  PMID:;
184.          203          363          34          38.46          8.0e-21
     gi|98662192|dbj|GAA00743.1| unnamed protein product [Pelot;  PMID:;
185.          224          367          42          34.38          1.0e-20
     gi|42523862|ref|NP_969242.1| putative integral membrane pro;  PMID:14752164;
     gi|39576069|emb|CAE80235.1| putative integral membrane pro;  PMID:;
186.          217          385          38          40.38          1.0e-20
     gi|28809074|dbj|BAC62182.1| hypothetical protein [Vibrio p;  PMID:10834969,12620739;
     gi|28900694|ref|NP_800349.1| hypothetical protein VPA0839 [;  PMID:12620739,10834969;
187.          212          386          38          41.83          1.0e-20
     gi|88799639|ref|ZP_01115215.1| response regulator, putative [;  PMID:;
     gi|88777724|gb|EAR08923.1| response regulator, putative [;  PMID:;
188.          204          362          37          37.98          1.0e-20
     gi|78689629|ref|ZP_00854288.1| Metal-dependent phosphohydrola;  PMID:;
189.          204          362          37          37.98          1.0e-20
     gi|82497016|ref|ZP_00882577.1| Metal-dependent phosphohydrola;  PMID:;
190.          213          362          36          35.82          1.0e-20
     gi|78701146|ref|ZP_00865599.1| HDIG [Alkalilimnicola ehrliche;  PMID:;
191.          185          364          34          43.03          1.0e-20
     gi|85836348|gb|EAQ54478.1| response regulator/phosphatase;  PMID:;
     gi|86145893|ref|ZP_01064221.1| response regulator/phosphatase;  PMID:;
192.          169          364          32          46.88          1.0e-20
     gi|68247255|gb|EAN29342.1| Response regulator receiver:Me;  PMID:;
     gi|69256749|ref|ZP_00606186.1| Response regulator receiver:Me;  PMID:;
193.          189          385          31          47.12          1.0e-20
     gi|88925855|gb|EAR44837.1| GGDEF:HDIG [Desulfotomaculum r;  PMID:;
     gi|88944557|ref|ZP_01147792.1| GGDEF:HDIG [Desulfotomaculum r;  PMID:;
194.          217          379          39          38.94          2.0e-20
     gi|88933675|ref|ZP_01139346.1| GGDEF:HDIG [Dehalococcoides sp;  PMID:;
     gi|88913849|gb|EAR33241.1| GGDEF:HDIG [Dehalococcoides sp;  PMID:;
195.          217          379          39          38.94          2.0e-20
     gi|73660781|emb|CAI83388.1| GGDEF domain [Dehalococcoides ;  PMID:;
     gi|73749065|ref|YP_308304.1| GGDEF domain [Dehalococcoides ;  PMID:;
196.          202          358          38          37.50          2.0e-20
     gi|71481550|ref|ZP_00661256.1| PAS:HDIG [Prosthecochloris vib;  PMID:;
     gi|71283662|gb|EAO15485.1| PAS:HDIG [Prosthecochloris vib;  PMID:;
197.          190          372          38          43.75          2.0e-20
     gi|77685745|ref|ZP_00801132.1| HDIG [Alkaliphilus metalliredi;  PMID:;
     gi|77638464|gb|EAO80865.1| HDIG [Alkaliphilus metalliredi;  PMID:;
198.          204          363          37          38.22          2.0e-20
     gi|71490908|gb|EAO23253.1| HDIG [Syntrophomonas wolfei su;  PMID:;
199.          204          362          37          37.98          2.0e-20
     gi|78687355|ref|ZP_00852106.1| GAF:Metal-dependent phosphohyd;  PMID:;
200.          217          363          37          35.10          2.0e-20
     gi|76258249|ref|ZP_00765905.1| HDIG [Chloroflexus aurantiacus;  PMID:;
     gi|76166778|gb|EAO60902.1| HDIG [Chloroflexus aurantiacus;  PMID:;
201.          216          367          36          36.30          2.0e-20
     gi|67928472|ref|ZP_00521660.1| Metal-dependent phosphohydrola;  PMID:;
     gi|67864378|gb|EAM59384.1| Metal-dependent phosphohydrola;  PMID:;
202.          195          379          35          44.23          2.0e-20
     gi|67874120|ref|ZP_00504025.1| GGDEF [Clostridium thermocellu;  PMID:;
     gi|67851466|gb|EAM47031.1| GGDEF [Clostridium thermocellu;  PMID:;
203.          211          392          34          43.51          2.0e-20
     gi|67849245|gb|EAM44862.1| Response regulator receiver:Me;  PMID:;
     gi|67916788|ref|ZP_00510482.1| Response regulator receiver:Me;  PMID:;
204.          174          367          33          46.39          2.0e-20
     gi|78366315|ref|ZP_00836596.1| Response regulator receiver:Me;  PMID:;
     gi|78361631|gb|EAP03454.1| Response regulator receiver:Me;  PMID:;
205.          217          362          40          34.86          3.0e-20
     gi|57233885|ref|YP_182092.1| GGDEF domain/HD domain protein;  PMID:;
     gi|57224333|gb|AAW39390.1| GGDEF domain/HD domain protein;  PMID:;
206.          217          362          39          34.86          3.0e-20
     gi|72160954|ref|YP_288611.1| metal-dependent phosphohydrola;  PMID:;
     gi|71914686|gb|AAZ54588.1| metal-dependent phosphohydrola;  PMID:;
207.          213          384          32          41.11          3.0e-20
     gi|17133054|dbj|BAB75619.1| two-component response regulat;  PMID:11759840;
     gi|17231412|ref|NP_487960.1| two-component response regulat;  PMID:11759840;
     gi|25535460|pir||AI2295 two-component response regulat;  PMID:11759840;
208.          6          404          0          95.67          3.0e-20
     gi|86145817|ref|ZP_01064146.1| response regulator/phosphatase;  PMID:;
     gi|85836516|gb|EAQ54645.1| response regulator/phosphatase;  PMID:;
209.          203          361          37          37.98          4.0e-20
     gi|71545947|ref|ZP_00666833.1| HDIG [Syntrophobacter fumaroxi;  PMID:;
210.          224          413          35          45.43          4.0e-20
     gi|94263694|ref|ZP_01287502.1| Response regulator receiver [d;  PMID:;
     gi|93455893|gb|EAT06052.1| Response regulator receiver [d;  PMID:;
211.          217          384          0          40.14          4.0e-20
     gi|71144579|gb|AAZ25052.1| response regulator/phosphatase;  PMID:;
     gi|71278839|ref|YP_270816.1| response regulator/phosphatase;  PMID:;
212.          217          382          35          39.66          5.0e-20
     gi|86606963|ref|YP_475726.1| response regulator [Synechococ;  PMID:;
     gi|86555505|gb|ABD00463.1| response regulator [Synechococ;  PMID:;
213.          203          394          34          45.91          5.0e-20
     gi|67849680|gb|EAM45278.1| Uncharacterized HDIG domain [C;  PMID:;
     gi|67916374|ref|ZP_00510087.1| Uncharacterized HDIG domain [C;  PMID:;
214.          169          368          32          47.84          5.0e-20
     gi|68516759|gb|EAN40470.1| Response regulator receiver:Me;  PMID:;
     gi|68545730|ref|ZP_00585280.1| Response regulator receiver:Me;  PMID:;
215.          258          385          46          30.53          7.0e-20
     gi|4982253|gb|AAD36745.1| conserved hypothetical protein;  PMID:10360571;
     gi|7462189|pir||D72226 conserved hypothetical protein;  PMID:10360571;
     gi|15644426|ref|NP_229478.1| hypothetical protein TM1678 [T;  PMID:10360571;
216.          217          359          39          34.13          7.0e-20
     gi|58582494|ref|YP_201510.1| response regulator [Xanthomona;  PMID:;
     gi|58427088|gb|AAW76125.1| response regulator [Xanthomona;  PMID:;
217.          217          359          39          34.13          7.0e-20
     gi|84368322|dbj|BAE69480.1| response regulator [Xanthomona;  PMID:;
     gi|84624382|ref|YP_451754.1| response regulator [Xanthomona;  PMID:;
218.          217          361          39          34.62          7.0e-20
     gi|20807019|ref|NP_622190.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
     gi|20515504|gb|AAM23794.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
219.          211          383          37          41.35          7.0e-20
     gi|20517071|gb|AAM25229.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
     gi|20808454|ref|NP_623625.1| HD-GYP domain [Thermoanaerobac;  PMID:11997336;
220.          203          384          33          43.51          7.0e-20
     gi|88861388|ref|ZP_01136018.1| Response regulator CheB (recep;  PMID:;
     gi|88816654|gb|EAR26479.1| Response regulator CheB (recep;  PMID:;
221.          220          358          0          33.17          7.0e-20
     gi|82744557|ref|ZP_00907072.1| HDIG [Clostridium beijerincki ;  PMID:;
222.          211          357          39          35.10          9.0e-20
     gi|82500618|ref|ZP_00886024.1| Metal-dependent phosphohydrola;  PMID:;
223.          206          376          36          40.87          9.0e-20
     gi|89896486|ref|YP_519973.1| hypothetical protein DSY3740 [;  PMID:;
     gi|89335934|dbj|BAE85529.1| hypothetical protein [Desulfit;  PMID:16513756;
224.          206          384          36          42.79          1.0e-19
     gi|61657431|emb|CAI44346.1| response regulator [Thermotoga;  PMID:;
225.          206          376          35          40.87          1.0e-19
     gi|68206012|ref|ZP_00558207.1| Uncharacterized HDIG domain [D;  PMID:;
226.          217          369          37          36.54          2.0e-19
     gi|85723402|gb|ABC78345.1| response regulator receiver do;  PMID:;
     gi|85860311|ref|YP_462513.1| response regulator receiver do;  PMID:;
227.          220          368          34          35.58          2.0e-19
     gi|76793224|ref|ZP_00775714.1| HDIG [Pseudoalteromonas atlant;  PMID:;
228.          204          383          33          43.03          2.0e-19
     gi|68515801|gb|EAN39515.1| Response regulator receiver:Me;  PMID:;
     gi|68546387|ref|ZP_00585934.1| Response regulator receiver:Me;  PMID:;
229.          6          382          25          90.38          2.0e-19
     gi|39984608|gb|AAR35994.1| HAMP domain/GAF domain/HD doma;  PMID:;
     gi|39997716|ref|NP_953667.1| HAMP domain/GAF domain/HD doma;  PMID:;
230.          216          363          40          35.34          3.0e-19
     gi|15644430|ref|NP_229482.1| hypothetical protein TM1682 [T;  PMID:10360571;
     gi|7462187|pir||D72222 conserved hypothetical protein;  PMID:10360571;
     gi|4982258|gb|AAD36749.1| conserved hypothetical protein;  PMID:10360571;
231.          217          362          39          34.86          3.0e-19
     gi|51893828|ref|YP_076519.1| two-component response regulat;  PMID:;
     gi|51857517|dbj|BAD41675.1| two-component response regulat;  PMID:;
232.          217          359          38          34.13          3.0e-19
     gi|78047473|ref|YP_363648.1| two-component system response ;  PMID:;
     gi|78035903|emb|CAJ23594.1| two-component system response ;  PMID:;
233.          217          359          38          34.13          3.0e-19
     gi|21242621|ref|NP_642203.1| response regulator [Xanthomona;  PMID:12024217;
     gi|21108085|gb|AAM36739.1| response regulator [Xanthomona;  PMID:12024217;
234.          220          364          37          34.62          3.0e-19
     gi|86605935|ref|YP_474698.1| GAF domain protein [Synechococ;  PMID:;
     gi|86554477|gb|ABC99435.1| GAF domain protein [Synechococ;  PMID:;
235.          208          372          37          39.42          3.0e-19
     gi|88946433|ref|ZP_01149512.1| PAS:HDIG [Desulfotomaculum red;  PMID:;
     gi|88924093|gb|EAR43101.1| PAS:HDIG [Desulfotomaculum red;  PMID:;
236.          213          361          37          35.58          3.0e-19
     gi|46449007|gb|AAS95659.1| response regulator [Desulfovib;  PMID:;
     gi|46579592|ref|YP_010400.1| response regulator [Desulfovib;  PMID:;
237.          217          363          36          35.10          3.0e-19
     gi|93451986|gb|EAT02693.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|94267477|ref|ZP_01290886.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|93450234|gb|EAT01517.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|94272114|ref|ZP_01292071.1| GAF:Metal-dependent phosphohyd;  PMID:;
238.          217          363          36          35.10          3.0e-19
     gi|93456024|gb|EAT06175.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|94263604|ref|ZP_01287414.1| GAF:Metal-dependent phosphohyd;  PMID:;
239.          217          386          35          40.62          5.0e-19
     gi|11355991|pir||H82486 probable response regulator VC;  PMID:10952301;
     gi|15600979|ref|NP_232609.1| response regulator, putative [;  PMID:10952301;
     gi|9657603|gb|AAF96122.1| response regulator, putative [;  PMID:10952301;
240.          217          385          34          40.38          5.0e-19
     gi|27366675|ref|NP_762202.1| Response regulator [Vibrio vul;  PMID:;
     gi|27358241|gb|AAO07192.1| Response regulator [Vibrio vul;  PMID:;
241.          204          363          34          38.22          5.0e-19
     gi|85859214|ref|YP_461416.1| response regulator with GAF an;  PMID:;
     gi|85722305|gb|ABC77248.1| response regulator with GAF an;  PMID:;
242.          189          363          33          41.83          5.0e-19
     gi|95931097|ref|ZP_01313823.1| response regulator receiver mo;  PMID:;
     gi|95132842|gb|EAT14515.1| response regulator receiver mo;  PMID:;
243.          215          351          39          32.69          6.0e-19
     gi|89333221|dbj|BAE82816.1| hypothetical protein [Desulfit;  PMID:16513756;
     gi|89893773|ref|YP_517260.1| hypothetical protein DSY1027 [;  PMID:;
244.          224          364          38          33.65          6.0e-19
     gi|94263976|ref|ZP_01287778.1| Response regulator receiver [d;  PMID:;
     gi|93455648|gb|EAT05830.1| Response regulator receiver [d;  PMID:;
245.          224          394          37          40.87          6.0e-19
     gi|51857179|dbj|BAD41337.1| conserved hypothetical protein;  PMID:;
     gi|51893490|ref|YP_076181.1| hypothetical protein STH2352 [;  PMID:;
246.          213          384          36          41.11          6.0e-19
     gi|73661017|emb|CAI83624.1| response regulator [Dehalococc;  PMID:;
     gi|73749301|ref|YP_308540.1| response regulator [Dehalococc;  PMID:;
247.          213          363          35          36.06          6.0e-19
     gi|86608211|ref|YP_476973.1| GAF domain protein [Synechococ;  PMID:;
     gi|86556753|gb|ABD01710.1| GAF domain protein [Synechococ;  PMID:;
248.          217          351          0          32.21          6.0e-19
     gi|75830983|ref|ZP_00760252.1| COG3437: Response regulator co;  PMID:;
249.          220          367          39          35.34          8.0e-19
     gi|77952134|ref|ZP_00816551.1| Response regulator receiver:Me;  PMID:;
     gi|77868941|gb|EAP00207.1| Response regulator receiver:Me;  PMID:;
250.          224          364          38          33.65          8.0e-19
     gi|93454692|gb|EAT04957.1| Response regulator receiver [d;  PMID:;
     gi|94264871|ref|ZP_01288646.1| Response regulator receiver [d;  PMID:;
251.          208          364          37          37.50          8.0e-19
     gi|78167266|gb|ABB24364.1| putative PAS/PAC sensor protei;  PMID:;
     gi|78187364|ref|YP_375407.1| putative PAS/PAC sensor protei;  PMID:;
252.          217          364          37          35.34          8.0e-19
     gi|76260085|ref|ZP_00767726.1| PAS [Chloroflexus aurantiacus ;  PMID:;
     gi|76165035|gb|EAO59174.1| PAS [Chloroflexus aurantiacus ;  PMID:;
253.          216          363          37          35.34          8.0e-19
     gi|15643904|ref|NP_228953.1| hypothetical protein TM1147 [T;  PMID:10360571;
     gi|7462302|pir||G72288 conserved hypothetical protein;  PMID:10360571;
     gi|4981695|gb|AAD36223.1| conserved hypothetical protein;  PMID:10360571;
254.          203          361          37          37.98          8.0e-19
     gi|82523914|emb|CAI78636.1| hypothetical protein [uncultur;  PMID:;
255.          203          361          35          37.98          8.0e-19
     gi|85859590|ref|YP_461792.1| two-component response regulat;  PMID:;
     gi|85722681|gb|ABC77624.1| two-component response regulat;  PMID:;
256.          216          386          35          40.87          8.0e-19
     gi|78220559|gb|ABB39908.1| metal dependent phosphohydrola;  PMID:;
     gi|78358154|ref|YP_389603.1| metal dependent phosphohydrola;  PMID:;
257.          113          364          28          60.34          8.0e-19
     gi|25496223|pir||A97348 HD-GYP domain containing prote;  PMID:11466286;
     gi|15896883|ref|NP_350232.1| HD-GYP domain containing prote;  PMID:11466286;
     gi|15026751|gb|AAK81572.1| HD-GYP domain containing prote;  PMID:11466286;
258.          6          358          25          84.62          8.0e-19
     gi|88918280|gb|EAR37461.1| HDIG [Geobacter uraniumreducen;  PMID:;
     gi|88935015|ref|ZP_01140653.1| HDIG [Geobacter uraniumreducen;  PMID:;
259.          211          361          0          36.06          8.0e-19
     gi|88796063|ref|ZP_01111747.1| response regulator [Alteromona;  PMID:;
     gi|88772580|gb|EAR03861.1| response regulator [Alteromona;  PMID:;
260.          217          372          40          37.26          1.0e-18
     gi|50876290|emb|CAG36130.1| hypothetical protein [Desulfot;  PMID:;
     gi|51245253|ref|YP_065137.1| hypothetical protein DP1401 [D;  PMID:;
261.          224          359          40          32.45          1.0e-18
     gi|66768646|ref|YP_243408.1| response regulator rpfG [Xanth;  PMID:;
     gi|7688439|emb|CAB89843.1| response regulator [Xanthomona;  PMID:11123673;
     gi|81305382|sp|Q4UU85|RPFG_XANC8 Response regulator rpfG ;  PMID:;
     gi|66573978|gb|AAY49388.1| response regulator rpfG [Xanth;  PMID:;
     gi|21231302|ref|NP_637219.1| response regulator [Xanthomona;  PMID:12024217;
     gi|21112956|gb|AAM41143.1| response regulator [Xanthomona;  PMID:12024217;
262.          217          369          38          36.54          1.0e-18
     gi|82745934|ref|ZP_00908443.1| HDIG [Clostridium beijerincki ;  PMID:;
     gi|82726055|gb|EAP60795.1| HDIG [Clostridium beijerincki ;  PMID:;
263.          216          361          37          34.86          1.0e-18
     gi|77683892|ref|ZP_00799334.1| Metal-dependent phosphohydrola;  PMID:;
264.          216          382          36          39.90          1.0e-18
     gi|15026325|gb|AAK81185.1| Sensory transduction protein c;  PMID:11466286;
     gi|15896496|ref|NP_349845.1| Sensory transduction protein c;  PMID:11466286;
     gi|25499989|pir||F97299 sensory transduction protein c;  PMID:11466286;
265.          216          362          36          35.10          1.0e-18
     gi|81168838|gb|ABB57178.1| metal dependent phosphohydrola;  PMID:;
     gi|81299957|ref|YP_400165.1| metal dependent phosphohydrola;  PMID:;
     gi|56685370|dbj|BAD78592.1| hypothetical protein [Synechoc;  PMID:;
     gi|56750411|ref|YP_171112.1| hypothetical protein syc0402_c;  PMID:;
266.          206          384          35          42.79          1.0e-18
     gi|61657403|emb|CAI44319.1| response regulator [Thermotoga;  PMID:;
267.          217          403          33          44.71          1.0e-18
     gi|94551575|gb|ABF41499.1| response regulator receiver mo;  PMID:;
     gi|94969525|ref|YP_591573.1| response regulator receiver mo;  PMID:;
268.          213          378          31          39.66          1.0e-18
     gi|23126560|ref|ZP_00108451.1| COG3437: Response regulator co;  PMID:;
269.          174          367          31          46.39          1.0e-18
     gi|78690357|ref|ZP_00855005.1| Response regulator receiver:Me;  PMID:;
270.          174          378          31          49.04          1.0e-18
     gi|78684567|ref|ZP_00849350.1| Response regulator receiver:Me;  PMID:;
     gi|78507504|gb|EAP21014.1| Response regulator receiver:Me;  PMID:;
271.          174          384          30          50.48          1.0e-18
     gi|68543355|ref|ZP_00583063.1| Response regulator receiver:Me;  PMID:;
     gi|68518943|gb|EAN42494.1| Response regulator receiver:Me;  PMID:;
272.          4          165          19          38.70          1.0e-18
     gi|17427603|emb|CAD14122.1| putative metal-dependent phosp;  PMID:11823852;
     gi|17545311|ref|NP_518713.1| hypothetical protein RSc0592 [;  PMID:11823852;
273.          217          367          0          36.06          1.0e-18
     gi|82402110|gb|EAP42897.1| HDIG [Caldicellulosiruptor sac;  PMID:;
     gi|82499908|ref|ZP_00885342.1| HDIG [Caldicellulosiruptor sac;  PMID:;
274.          217          385          0          40.38          1.0e-18
     gi|71490974|gb|EAO23316.1| HDIG [Syntrophomonas wolfei su;  PMID:;
275.          202          349          39          35.34          2.0e-18
     gi|15026497|gb|AAK81340.1| HD-GYP domain (HD superfamily ;  PMID:11466286;
     gi|15896651|ref|NP_350000.1| HD-GYP domain (HD superfamily ;  PMID:11466286;
     gi|25496191|pir||A97319 HD-GYP domain (HD superfamily ;  PMID:11466286;
276.          220          367          38          35.34          2.0e-18
     gi|76791144|ref|ZP_00773652.1| Response regulator receiver:Me;  PMID:;
277.          213          378          37          39.66          2.0e-18
     gi|57234549|ref|YP_181366.1| response regulator [Dehalococc;  PMID:;
     gi|57224997|gb|AAW40054.1| response regulator [Dehalococc;  PMID:;
278.          219          360          36          33.89          2.0e-18
     gi|88944804|ref|ZP_01148028.1| Metal-dependent phosphohydrola;  PMID:;
279.          203          361          36          37.98          2.0e-18
     gi|91200185|emb|CAJ73229.1| conserved hypothetical protein;  PMID:;
280.          203          359          36          37.50          2.0e-18
     gi|68209242|ref|ZP_00561288.1| PAS:GGDEF [Desulfitobacterium ;  PMID:;
281.          203          359          36          37.50          2.0e-18
     gi|89893922|ref|YP_517409.1| hypothetical protein DSY1176 [;  PMID:;
     gi|89333370|dbj|BAE82965.1| hypothetical protein [Desulfit;  PMID:;
282.          212          364          36          36.54          2.0e-18
     gi|71836717|ref|ZP_00676485.1| GAF:Metal-dependent phosphohyd;  PMID:;
283.          206          367          35          38.70          2.0e-18
     gi|88860374|ref|ZP_01135012.1| Metal-dependent phosphohydrola;  PMID:;
     gi|88817572|gb|EAR27389.1| Metal-dependent phosphohydrola;  PMID:;
284.          203          385          35          43.75          2.0e-18
     gi|85837032|gb|EAQ55152.1| hypothetical protein MED222_06;  PMID:;
     gi|86145455|ref|ZP_01063786.1| hypothetical protein MED222_06;  PMID:;
285.          206          398          34          46.15          2.0e-18
     gi|61657458|emb|CAI44370.1| response regulator [Thermotoga;  PMID:;
286.          227          410          33          43.99          2.0e-18
     gi|82500959|ref|ZP_00886344.1| Metal-dependent phosphohydrola;  PMID:;
287.          217          385          0          40.38          2.0e-18
     gi|71550491|ref|ZP_00670601.1| Metal-dependent phosphohydrola;  PMID:;
288.          220          358          0          33.17          2.0e-18
     gi|82727334|gb|EAP62068.1| HDIG [Clostridium beijerincki ;  PMID:;
     gi|82744579|ref|ZP_00907094.1| HDIG [Clostridium beijerincki ;  PMID:;
289.          224          364          38          33.65          3.0e-18
     gi|83312538|ref|YP_422802.1| Response regulator containing ;  PMID:;
     gi|82947379|dbj|BAE52243.1| Response regulator containing ;  PMID:;
290.          217          364          37          35.34          3.0e-18
     gi|88917482|gb|EAR36675.1| HDIG [Geobacter uraniumreducen;  PMID:;
     gi|88935778|ref|ZP_01141404.1| HDIG [Geobacter uraniumreducen;  PMID:;
291.          217          362          37          34.86          3.0e-18
     gi|88934851|ref|ZP_01140490.1| GAF:Metal-dependent phosphohyd;  PMID:;
     gi|88918315|gb|EAR37495.1| GAF:Metal-dependent phosphohyd;  PMID:;
292.          212          368          36          37.50          3.0e-18
     gi|69950941|ref|ZP_00638733.1| Metal-dependent phosphohydrola;  PMID:;
293.          218          364          36          35.10          3.0e-18
     gi|68244918|gb|EAN27062.1| Response regulator receiver:Me;  PMID:;
294.          217          363          36          35.10          4.0e-18
     gi|55981345|ref|YP_144642.1| HD domain protein [Thermus the;  PMID:;
     gi|55772758|dbj|BAD71199.1| HD domain protein [Thermus the;  PMID:;
295.          216          367          36          36.30          4.0e-18
     gi|87286706|gb|EAQ78611.1| probable two component system,;  PMID:;
     gi|87310485|ref|ZP_01092614.1| probable two component system,;  PMID:;
296.          202          372          36          40.87          4.0e-18
     gi|57234183|ref|YP_181764.1| HD domain protein [Dehalococco;  PMID:;
     gi|57224631|gb|AAW39688.1| HD domain protein [Dehalococco;  PMID:;
297.          217          386          35          40.62          4.0e-18
     gi|75823499|ref|ZP_00752996.1| COG3437: Response regulator co;  PMID:;
298.          217          363          35          35.10          4.0e-18
     gi|46199312|ref|YP_004979.1| integral membrane protein/HD-h;  PMID:;
     gi|46196937|gb|AAS81352.1| integral membrane protein/HD-h;  PMID:;
299.          217          385          34          40.38          4.0e-18
     gi|27366901|ref|NP_762428.1| Response regulator [Vibrio vul;  PMID:;
     gi|27358468|gb|AAO07418.1| Response regulator [Vibrio vul;  PMID:;
300.          202          358          34          37.50          4.0e-18
     gi|18310542|ref|NP_562476.1| hypothetical protein CPE1560 [;  PMID:11792842;
     gi|18145223|dbj|BAB81266.1| conserved hypothetical protein;  PMID:11792842;
301.          207          364          34          37.74          4.0e-18
     gi|88795250|ref|ZP_01110949.1| Response regulator CheB (recep;  PMID:;
     gi|88773372|gb|EAR04638.1| Response regulator CheB (recep;  PMID:;
302.          217          389          32          41.35          4.0e-18
     gi|77684835|ref|ZP_00800254.1| Metal-dependent phosphohydrola;  PMID:;
303.          227          358          39          31.49          5.0e-18
     gi|68208479|ref|ZP_00560592.1| Metal-dependent phosphohydrola;  PMID:;
304.          213          349          38          32.69          5.0e-18
     gi|27350595|dbj|BAC47605.1| two-component response regulat;  PMID:12597275,12597279;
     gi|27377451|ref|NP_768980.1| two-component response regulat;  PMID:12597275;
305.          224          363          37          33.41          5.0e-18
     gi|34102499|gb|AAQ58864.1| probable two-component system ;  PMID:;
     gi|34496644|ref|NP_900859.1| probable two-component system ;  PMID:;
306.          203          364          37          38.70          5.0e-18
     gi|84393506|ref|ZP_00992261.1| hypothetical protein V12B01_13;  PMID:;
     gi|84375859|gb|EAP92751.1| hypothetical protein V12B01_13;  PMID:;
307.          217          382          36          39.66          5.0e-18
     gi|46196565|gb|AAS80981.1| two-component response regulat;  PMID:;
     gi|46198941|ref|YP_004608.1| two-component response regulat;  PMID:;
308.          207          367          34          38.46          5.0e-18
     gi|67084318|gb|EAM03804.1| Response regulator receiver:Me;  PMID:;
     gi|67159071|ref|ZP_00419805.1| Response regulator receiver:Me;  PMID:;
309.          205          384          33          43.03          5.0e-18
     gi|77360093|ref|YP_339668.1| Response regulator CheB (recep;  PMID:;
     gi|76875004|emb|CAI86225.1| Response regulator CheB (recep;  PMID:;
310.          212          385          31          41.59          5.0e-18
     gi|78486516|ref|YP_392441.1| response regulator receiver (C;  PMID:;
     gi|78364802|gb|ABB42767.1| response regulator receiver (C;  PMID:;
311.          217          390          31          41.59          5.0e-18
     gi|88817402|gb|EAR27220.1| HD domain protein [Pseudoalter;  PMID:;
     gi|88860807|ref|ZP_01135444.1| HD domain protein [Pseudoalter;  PMID:;
312.          174          378          30          49.04          5.0e-18
     gi|24372449|ref|NP_716491.1| response regulator [Shewanella;  PMID:12368813;
     gi|24346432|gb|AAN53936.1| response regulator [Shewanella;  PMID:12368813;
313.          223          362          37          33.41          7.0e-18
     gi|23957820|gb|AAN40833.1| unknown [Synechococcus sp. PCC;  PMID:;
314.          18          165          18          35.34          1.0e-16
     gi|25521447|pir||H97634 hypothetical protein AGR_C_416;  PMID:11743194;
     gi|15157451|gb|AAK88033.1| AGR_C_4164p [Agrobacterium tum;  PMID:;
     gi|17936174|ref|NP_532964.1| hypothetical protein Atu2291 [;  PMID:11743193;
     gi|17740768|gb|AAL43280.1| conserved hypothetical protein;  PMID:11743193;
     gi|15889567|ref|NP_355248.1| hypothetical protein AGR_C_416;  PMID:11743194;
     gi|25522244|pir||AB2858 conserved hypothetical protein;  PMID:11743193;
315.          1          163          18          38.94          4.0e-16
     gi|11352349|pir||C83049 probable two-component respons;  PMID:10984043;
     gi|84317338|ref|ZP_00965786.1| COG3437: Response regulator co;  PMID:;
     gi|15599975|ref|NP_253469.1| probable two-component respons;  PMID:10984043;
     gi|84323562|ref|ZP_00971631.1| COG3437: Response regulator co;  PMID:;
     gi|9951046|gb|AAG08167.1| probable two-component respons;  PMID:10984043;
316.          22          169          15          35.34          4.0e-16
     gi|3323224|gb|AAC65863.1| conserved hypothetical protein;  PMID:9665876;
     gi|7514633|pir||E71268 conserved hypothetical protein;  PMID:9665876;
     gi|15639897|ref|NP_219347.1| hypothetical protein TP0912 [T;  PMID:9665876;
317.          12          138          14          30.29          2.0e-15
     gi|15895878|ref|NP_349227.1| HD-GYP hydrolase domain contai;  PMID:11466286;
     gi|15025645|gb|AAK80567.1| HD-GYP hydrolase domain contai;  PMID:11466286;
     gi|25498366|pir||D97222 HD-GYP hydrolase domain contai;  PMID:11466286;
318.          18          150          16          31.73          5.0e-15
     gi|11354714|pir||D82069 conserved hypothetical protein;  PMID:10952301;
     gi|15642493|ref|NP_232126.1| hypothetical protein VC2497 [V;  PMID:10952301;
     gi|9657078|gb|AAF95639.1| conserved hypothetical protein;  PMID:10952301;
319.          12          213          14          48.32          3.0e-14
     gi|25489101|pir||H83650 hypothetical protein BH0008 [i;  PMID:11058132;
     gi|15612571|ref|NP_240874.1| hypothetical protein BH0008 [B;  PMID:11058132,10972189,10805564,10484179,10427704,10192928,10086842,10086841;
     gi|10172620|dbj|BAB03727.1| BH0008 [Bacillus halodurans C-;  PMID:10086841,10086842,10192928,10484179,10427704,10805564,10972189,11058132;
     gi|5672654|dbj|BAA82692.1| ORF14 [Bacillus halodurans] ;  PMID:10427704;
320.          79          181          22          24.52          4.0e-12
     gi|20516735|gb|AAM24921.1| (AE013126) HD-GYP domain [Ther;  PMID:11997336;
     gi|20808146|ref|NP_623317.1| (NC_003869) HD-GYP domain [The;  PMID:11997336;
321.          18          163          14          34.86          8.0e-11
     gi|15642337|ref|NP_231970.1| hypothetical protein VC2340 [V;  PMID:10952301;
     gi|9656907|gb|AAF95483.1| conserved hypothetical protein;  PMID:10952301;
     gi|11354698|pir||E82088 conserved hypothetical protein;  PMID:10952301;
322.          208          381          23          41.59          5.0e-10
     gi|23474085|ref|ZP_00129380.1| hypothetical protein [Desulfov;  PMID:;
323.          204          403          17          47.84          1.0e-08
     gi|19704080|ref|NP_603642.1| metal dependent phosphohydrola;  PMID:11889109;
     gi|19714280|gb|AAL94941.1| metal dependent phosphohydrola;  PMID:11889109;
324.          16          170          16          37.02          8.0e-08
     gi|11356066|pir||G82244 response regulator VC1087 [imp;  PMID:10952301;
     gi|15641100|ref|NP_230732.1| response regulator [Vibrio cho;  PMID:10952301;
     gi|9655555|gb|AAF94246.1| response regulator [Vibrio cho;  PMID:10952301;
325.          213          277          23          15.38          2.0e-07
     gi|21402351|ref|NP_658336.1| HD, HD domain [Bacillus anthra;  PMID:12004073;
326.          13          107          22          22.60          2.0e-07
     gi|16410895|emb|CAC99544.1| lmo1466 [Listeria monocytogene;  PMID:11679669;
     gi|25370051|pir||AB1258 hypothetical protein lmo1466 [;  PMID:11679669;
     gi|16803506|ref|NP_464991.1| similar to unknown proteins [L;  PMID:11679669;
327.          13          157          19          34.62          2.0e-07
     gi|16800571|ref|NP_470839.1| similar to unknown proteins [L;  PMID:11679669;
     gi|16413976|emb|CAC96734.1| lin1503 [Listeria innocua] hyp;  PMID:11679669;
     gi|25370052|pir||AF1620 hypothetical protein homolog l;  PMID:11679669;
328.          18          170          14          36.54          2.0e-07
     gi|2688290|gb|AAC66766.1| predicted coding region BB0374;  PMID:9403685;
     gi|15594719|ref|NP_212508.1| hypothetical protein BB0374 [B;  PMID:9403685;
     gi|7463303|pir||E70146 hypothetical protein BB0374 - ;  PMID:9403685;
     gi|3915362|sp|O50161|Y374_BORBU Hypothetical protein BB0374 ;  PMID:9403685;
329.          12          150          15          33.17          6.0e-07
     gi|2634965|emb|CAB14462.1| yqfF [Bacillus subtilis subsp.;  PMID:9384377;
     gi|16079587|ref|NP_390411.1| yqfF [Bacillus subtilis] ;  PMID:9384377;
     gi|2634979|emb|CAB14475.1| (Z99117) yqfF [Bacillus subtil;  PMID:9384377;
     gi|1730999|sp|P46344|YQFF_BACSU Hypothetical protein yqfF ;  PMID:8969508,9384377;
     gi|7475306|pir||E69953 hypothetical protein yqfF - Ba;  PMID:9384377;
     gi|1303822|dbj|BAA12478.1| YqfF [Bacillus subtilis] ;  PMID:8969508;
330.          18          166          14          35.58          2.0e-06
     gi|15606808|ref|NP_214188.1| hypothetical protein aq_1732 [;  PMID:9537320;
     gi|7445156|pir||D70449 conserved hypothetical protein;  PMID:9537320;
     gi|2984046|gb|AAC07588.1| hypothetical protein aq_1732 [;  PMID:9537320;
     gi|13432017|sp|O67622|Y1732_AQUAE UPF0144 protein aq_1732 ;  PMID:9537320;
331.          40          178          10          33.17          3.0e-06
     gi|15597768|ref|NP_251262.1| probable two-component respons;  PMID:10984043;
     gi|11352326|pir||G83324 probable two-component respons;  PMID:10984043;
     gi|84320540|ref|ZP_00968913.1| COG3437: Response regulator co;  PMID:;
     gi|9948633|gb|AAG05960.1| probable two-component respons;  PMID:10984043;
     gi|84326899|ref|ZP_00974923.1| COG3437: Response regulator co;  PMID:;
332.          18          196          12          42.79          9.0e-06
     gi|12642647|gb|AAK00328.1| YmdA [Lactobacillus delbruecki;  PMID:;
333.          18          166          12          35.58          2.0e-05
     gi|7514618|pir||G71285 conserved hypothetical protein;  PMID:9665876;
     gi|3323066|gb|AAC65727.1| conserved hypothetical protein;  PMID:9665876;
     gi|15639751|ref|NP_219201.1| hypothetical protein TP0764 [T;  PMID:9665876;
334.          67          190          9          29.57          2.0e-05
     gi|15601649|ref|NP_233280.1| chemotactic transducer-related;  PMID:10952301;
     gi|9658329|gb|AAF96792.1| chemotactic transducer-related;  PMID:10952301;
     gi|11354460|pir||H82403 chemotactic transducer-related;  PMID:10952301;
335.          2          170          14          40.38          3.0e-05
     gi|17133440|dbj|BAB76003.1| all4304 [Nostoc sp. PCC 7120] ;  PMID:11759840;
     gi|17231796|ref|NP_488344.1| hypothetical protein [Nostoc s;  PMID:11759840;
     gi|25535496|pir||AI2343 hypothetical protein all4304 [;  PMID:11759840;
336.          18          133          25          27.64          6.0e-05
     gi|401696|sp|Q01444|YFF1_MYCMY Hypothetical UPF0144 protein i;  PMID:1280809;
     gi|150209|gb|AAA25440.1| ORF 1 ;  PMID:1280809;
     gi|479812|pir||S35480 hypothetical protein 1 (SRPM54;  PMID:1280809;
337.          18          133          25          27.64          6.0e-05
     gi|282602|pir||S27590 hypothetical protein 1 - Mycop;  PMID:;
338.          2          81          16          18.99          7.0e-05
     gi|22294206|dbj|BAC08037.1| tlr0485 [Thermosynechococcus e;  PMID:;
     gi|22298028|ref|NP_681275.1| hypothetical protein tlr0485 [;  PMID:;
339.          18          163          27          34.86          2.0e-04
     gi|77994972|gb|ABB13871.1| GGDEF/GAF/HDIG domain protein ;  PMID:;
     gi|78042857|ref|YP_360847.1| GGDEF/GAF/HDIG domain protein ;  PMID:;
340.          193          383          15          45.67          2.0e-04
     gi|23475950|ref|ZP_00131205.1| hypothetical protein [Desulfov;  PMID:;
341.          213          347          0          32.21          3.0e-04
     gi|68245349|gb|EAN27476.1| Metal-dependent phosphohydrola;  PMID:;
342.          213          358          28          34.86          4.0e-04
     gi|76795535|ref|ZP_00777908.1| HDIG [Thermoanaerobacter ethan;  PMID:;
     gi|76589343|gb|EAO65742.1| HDIG [Thermoanaerobacter ethan;  PMID:;
343.          13          107          20          22.60          1.0e-03
     gi|20807451|ref|NP_622622.1| predicted membrane-associated ;  PMID:11997336;
     gi|20515976|gb|AAM24226.1| predicted membrane-associated ;  PMID:11997336;
344.          18          107          20          21.39          1.0e-03
     gi|18310654|ref|NP_562588.1| hypothetical protein CPE1672 [;  PMID:11792842;
     gi|32171876|sp|Q8XJT1|Y1672_CLOPE Hypothetical UPF0144 protein C;  PMID:11792842;
     gi|18145335|dbj|BAB81378.1| conserved hypothetical protein;  PMID:11792842;
 
Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.
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