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   TM0010;TM0010
 Protein Sequence Comparative Analysis   (PSCA)
 
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TM0010    REFERENCE SYSTEM

Accession: TM0010
Description: NADP-reducing hydrogenase, subunit C.
Organism: Thermotoga maritima.
Keyword: Iron-sulfur;Complete proteome;

  
References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: Q9WXM5;  PMID:10360571;
   GenBank: AAD35104;  PMID:10360571;
Family annotation                  
1.          trusted          evalue:6.0e-93
    Pfam:PF01512   Respiratory-chain NADH dehydrogenase 51 Kd subunit;  PMID:;
2.          trusted          evalue:5.0e-29
    Pfam:PF10589   NADH-ubiquinone oxidoreductase-F iron-sulfur binding region;  PMID:;
3.          trusted          evalue:2.7e-28
    Pfam:v3_1_0:1m2dA00   0;  PMID:;
4.          trusted          evalue:8.6e-19
    Pfam:v3_1_0:1gteA01   0;  PMID:;
5.          trusted          evalue:3.0e-15
    Pfam:v3_1_0:1xer000   0;  PMID:;
6.          trusted          evalue:2.7e-12
    Pfam:PF10531   SLBB domain;  PMID:;
7.          trusted          evalue:7.0e-14
    Pfam:v3_1_0:7fd1A00   0;  PMID:;
8.          trusted          evalue:9.9e-13
    Pfam:v3_1_0:1h98A00   0;  PMID:;
9.          trusted          evalue:4.5e-12
    Pfam:v3_1_0:1jb0C00   0;  PMID:;
10.          trusted          evalue:3.5e-13
    Pfam:v3_1_0:1kqfB01   0;  PMID:;
11.          trusted          evalue:1.3e-11
    Pfam:v3_1_0:1jnrB01   0;  PMID:;
12.          trusted          evalue:1.6e-11
    Pfam:v3_1_0:2fgoA00   0;  PMID:;
13.          trusted          evalue:4.3e-12
    Pfam:v3_1_0:2c42A05   0;  PMID:;
14.          trusted          evalue:3.2e-10
    Pfam:v3_1_0:1hfeL02   0;  PMID:;
15.          trusted          evalue:9.9e-08
    Pfam:PF00037   4Fe-4S binding domain;  PMID:;
16.          trusted          evalue:4.4e-10
    Pfam:v3_1_0:2fdn000   0;  PMID:;
17.          trusted          evalue:2.5e-09
    Pfam:v3_1_0:1sj1A00   0;  PMID:;
18.          trusted          evalue:1.1e-08
    Pfam:v3_1_0:1fxd000   0;  PMID:;
19.          trusted          evalue:1.6e-08
    Pfam:v3_1_0:1kf6B02   0;  PMID:;
20.          trusted          evalue:1.8e-05
    Pfam:v3_1_0:1h0hB01   0;  PMID:;
21.          trusted          evalue:3.8e-05
    Pfam:v3_1_0:1kqfB02   0;  PMID:;
22.          trusted          evalue:3.6e-04
    Pfam:v3_1_0:1hfeL01   0;  PMID:;
23.          trusted          evalue:3.0e-04
    Pfam:v3_1_0:1ti6B01   0;  PMID:;
24.          trusted          evalue:2.0e-03
    Pfam:v3_1_0:1yq4B02   0;  PMID:;
25.          trusted          evalue:5.5e-03
    Pfam:v3_1_0:2bs2B02   0;  PMID:;
26.          trusted          evalue:6.8e-03
    Pfam:v3_1_0:1gteA02   0;  PMID:;
27.          trusted or gathering
    InterPro:IPR001450   4Fe4S_ferredoxin;  PMID:3932661,2506358,2600971,7966291;
28.          trusted or gathering
    InterPro:IPR001949   Complex1_51K;  PMID:2029890;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          117          529          47          67.87          1.0e-109
     Pdb:3M9S CRYSTAL STRUCTURE OF RESPIRATORY COMPLEX I FROM THERMUS THER; PMID:;
     Pdb:3IAM CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORY C; PMID:;
     Pdb:3I9V CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORY C; PMID:;
     Pdb:3IAS CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORY C; PMID:;
     Pdb:4HEA CRYSTAL STRUCTURE OF THE ENTIRE RESPIRATORY COMPLEX I FROM T; PMID:;
     Pdb:2YBB FITTED MODEL FOR BOVINE MITOCHONDRIAL SUPERCOMPLEX I1III2IV ; PMID:;
     Pdb:2FUG CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORY C; PMID:;
2.          14          101          39          14.33          2.0e-09
     Pdb:1M2A CRYSTAL STRUCTURE AT 1.5 ANGSTROMS RESOLUTION OF THE WILD TY; PMID:10884354,12089152;
     Pdb:1F37 STRUCTURE OF A THIOREDOXIN-LIKE [2FE-2S] FERREDOXIN FROM AQU; PMID:10441520,10884354;
3.          14          101          38          14.33          2.0e-08
     Pdb:1M2B CRYSTAL STRUCTURE AT 1.25 ANGSTROMS RESOLUTION OF THE CYS55S; PMID:10884354,12089152;
4.          14          101          38          14.33          2.0e-08
     Pdb:1M2D CRYSTAL STRUCTURE AT 1.05 ANGSTROMS RESOLUTION OF THE CYS59S; PMID:10884354,12089152;
5.          518          601          34          13.67          3.0e-06
     Pdb:1HFE 1.6 A RESOLUTION STRUCTURE OF THE FE-ONLY HYDROGENASE FROM D; PMID:10368269;
6.          543          601          38          9.56          1.0e-05
     Pdb:1GX7 BEST MODEL OF THE ELECTRON TRANSFER COMPLEX BETWEEN CYTOCHRO; PMID:12885397;
     Pdb:1E08 STRUCTURAL MODEL OF THE [FE]-HYDROGENASE/CYTOCHROME C553 COM; PMID:10748163,10704202;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          607          100          99.84          0.0e+00
     gi|7431975|pir||D72430 NADP-reducing hydrogenase, sub;  PMID:10360571;
     gi|4980493|gb|AAD35104.1| NADP-reducing hydrogenase, sub;  PMID:10360571;
     gi|15642785|ref|NP_227826.1| NADP-reducing hydrogenase, sub;  PMID:10360571;
2.          8          595          65          96.71          0.0e+00
     gi|76795774|ref|ZP_00778145.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|76588759|gb|EAO65160.1| NADH dehydrogenase (quinone) [;  PMID:;
3.          1          595          65          97.86          0.0e+00
     gi|82499409|ref|ZP_00884855.1| NADH:ubiquinone oxidoreductase;  PMID:;
4.          8          536          65          86.99          0.0e+00
     gi|98663259|dbj|GAA00018.1| unnamed protein product [Pelot;  PMID:;
5.          8          595          65          96.71          0.0e+00
     gi|20515893|gb|AAM24149.1| NADH:ubiquinone oxidoreductase;  PMID:11997336;
     gi|20807374|ref|NP_622545.1| NADH:ubiquinone oxidoreductase;  PMID:11997336;
6.          113          595          63          79.41          0.0e+00
     gi|71836217|ref|ZP_00675986.1| Hydrogen dehydrogenase [Peloba;  PMID:;
7.          8          535          63          86.82          0.0e+00
     gi|71546926|ref|ZP_00667669.1| NADH dehydrogenase (quinone) [;  PMID:;
8.          115          595          63          79.08          0.0e+00
     gi|77919440|ref|YP_357255.1| NADH:ubiquinone oxidoreductase;  PMID:;
9.          115          595          63          79.08          0.0e+00
     gi|77919203|ref|YP_357018.1| NADH:ubiquinone oxidoreductase;  PMID:;
10.          8          595          62          96.71          0.0e+00
     gi|78044500|ref|YP_359586.1| Fe-hydrogenase, beta subunit [;  PMID:;
     gi|77996615|gb|ABB15514.1| Fe-hydrogenase, beta subunit [;  PMID:;
11.          1          595          62          97.86          0.0e+00
     gi|67849522|gb|EAM45126.1| NADH dehydrogenase (ubiquinone;  PMID:;
     gi|67916532|ref|ZP_00510239.1| NADH dehydrogenase (ubiquinone;  PMID:;
12.          1          596          62          98.02          0.0e+00
     gi|23021198|ref|ZP_00060882.1| hypothetical protein [Clostrid;  PMID:;
13.          8          535          61          86.82          0.0e+00
     gi|77685013|ref|ZP_00800426.1| NADH dehydrogenase (quinone) [;  PMID:;
14.          14          594          61          95.55          0.0e+00
     gi|82499674|ref|ZP_00885113.1| NADH:ubiquinone oxidoreductase;  PMID:;
15.          49          595          61          89.95          0.0e+00
     gi|89211312|ref|ZP_01189683.1| 4Fe-4S ferredoxin, iron-sulfur;  PMID:;
     gi|89159100|gb|EAR78777.1| 4Fe-4S ferredoxin, iron-sulfur;  PMID:;
16.          17          597          61          95.55          0.0e+00
     gi|57641548|ref|YP_184026.1| NADH:ubiquinone oxidoreductase;  PMID:;
     gi|57159872|dbj|BAD85802.1| NADH:ubiquinone oxidoreductase;  PMID:;
17.          4          596          61          97.53          0.0e+00
     gi|14250934|emb|CAC39230.1| HymB protein [Eubacterium acid;  PMID:12560990;
18.          113          595          61          79.41          0.0e+00
     gi|466365|gb|AAA87056.1| potential NAD-reducing hydroge;  PMID:7751270;
     gi|2126448|pir||C57150 NADP-reducing hydrogenase (EC ;  PMID:7751270;
19.          8          593          60          96.38          0.0e+00
     gi|29345535|ref|NP_809038.1| NADH:ubiquinone oxidoreductase;  PMID:12663928;
     gi|29337427|gb|AAO75232.1| NADH:ubiquinone oxidoreductase;  PMID:12663928;
20.          1          595          60          97.86          0.0e+00
     gi|77685389|ref|ZP_00800790.1| NADH dehydrogenase (quinone) [;  PMID:;
21.          8          593          59          96.38          0.0e+00
     gi|51894343|ref|YP_077034.1| iron hydrogenase beta subunit ;  PMID:;
     gi|51858032|dbj|BAD42190.1| iron hydrogenase beta subunit ;  PMID:;
22.          8          595          59          96.71          0.0e+00
     gi|94448907|emb|CAJ44288.1| NADH dehydrogenase (ubiquinone;  PMID:;
23.          8          595          59          96.71          0.0e+00
     gi|98661929|dbj|GAA01126.1| unnamed protein product [Pelot;  PMID:;
24.          8          528          59          85.67          0.0e+00
     gi|91202657|emb|CAJ72296.1| similar to nuoF subunit of the;  PMID:;
25.          8          528          59          85.67          0.0e+00
     gi|91200210|emb|CAJ73254.1| strongly similar to proton-tra;  PMID:;
26.          4          527          59          86.16          0.0e+00
     gi|88946051|ref|ZP_01149148.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|88924391|gb|EAR43392.1| NADH dehydrogenase (quinone) [;  PMID:;
27.          8          595          58          96.71          0.0e+00
     gi|90572928|ref|ZP_01229449.1| hypothetical protein CdifQ_020;  PMID:;
28.          8          593          58          96.38          0.0e+00
     gi|68207725|ref|ZP_00559876.1| NADH dehydrogenase (ubiquinone;  PMID:;
29.          63          593          57          87.31          0.0e+00
     gi|23055990|ref|ZP_00082056.1| hypothetical protein [Geobacte;  PMID:;
30.          8          593          57          96.38          0.0e+00
     gi|89159814|gb|EAR79474.1| 4Fe-4S ferredoxin, iron-sulfur;  PMID:;
     gi|89210552|ref|ZP_01188940.1| 4Fe-4S ferredoxin, iron-sulfur;  PMID:;
31.          5          595          57          97.20          0.0e+00
     gi|23113165|ref|ZP_00098566.1| hypothetical protein [Desulfit;  PMID:;
32.          8          536          57          86.99          0.0e+00
     gi|67932218|ref|ZP_00525366.1| Hydrogen dehydrogenase [Soliba;  PMID:;
33.          14          593          57          95.39          0.0e+00
     gi|71492468|gb|EAO24773.1| NADH dehydrogenase (quinone) [;  PMID:;
34.          8          526          56          85.34          0.0e+00
     gi|77993213|dbj|BAE46793.1| bidirectional hydrogenase F su;  PMID:;
35.          8          535          56          86.82          0.0e+00
     gi|39984707|gb|AAR36093.1| NAD-reducing hydrogenase, alph;  PMID:;
36.          14          595          56          95.72          0.0e+00
     gi|91203805|emb|CAJ71458.1| similar to NADH:ubiquinone oxi;  PMID:;
37.          8          536          56          86.99          0.0e+00
     gi|71546725|ref|ZP_00667491.1| NADH dehydrogenase (quinone) [;  PMID:;
38.          8          593          56          96.38          0.0e+00
     gi|88945912|ref|ZP_01149051.1| NADH dehydrogenase (quinone) [;  PMID:;
39.          8          593          56          96.38          0.0e+00
     gi|77918446|ref|YP_356261.1| NADH:ubiquinone oxidoreductase;  PMID:;
     gi|77544529|gb|ABA88091.1| NADH:ubiquinone oxidoreductase;  PMID:;
40.          4          595          56          97.36          0.0e+00
     gi|88944750|ref|ZP_01147974.1| NADH dehydrogenase (quinone) [;  PMID:;
41.          8          523          56          84.84          0.0e+00
     gi|62632270|gb|AAX89149.1| HoxF [Allochromatium vinosum] ;  PMID:;
42.          8          527          56          85.50          0.0e+00
     gi|75910850|ref|YP_325146.1| Respiratory-chain NADH dehydro;  PMID:;
     gi|1032476|emb|CAA55873.1| hydrogenase subunit [Anabaena ;  PMID:7588754;
     gi|2126554|pir||I39730 NADH2 dehydrogenase (ubiquinon;  PMID:7588754;
     gi|75704575|gb|ABA24251.1| Respiratory-chain NADH dehydro;  PMID:;
43.          17          594          55          95.06          0.0e+00
     gi|85857933|ref|YP_460135.1| NADH:ubiquinone oxidoreductase;  PMID:;
     gi|85721024|gb|ABC75967.1| NADH:ubiquinone oxidoreductase;  PMID:17442750;
44.          8          522          55          84.68          0.0e+00
     gi|83630910|gb|ABC26907.1| HoxF [Arthrospira platensis FA;  PMID:;
45.          8          523          55          84.84          0.0e+00
     gi|13366092|dbj|BAB39382.1| hydrogenase diaphorase large s;  PMID:;
46.          8          593          55          96.38          0.0e+00
     gi|57234506|ref|YP_181467.1| [Fe] hydrogenase, HymB subunit;  PMID:;
     gi|57224954|gb|AAW40011.1| [Fe] hydrogenase, HymB subunit;  PMID:;
47.          8          593          55          96.38          0.0e+00
     gi|88933611|ref|ZP_01139284.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|88913928|gb|EAR33318.1| NADH dehydrogenase (quinone) [;  PMID:;
48.          8          593          55          96.38          0.0e+00
     gi|67940618|ref|ZP_00532999.1| NADH dehydrogenase (quinone) [;  PMID:;
49.          2          593          55          97.36          0.0e+00
     gi|71546556|ref|ZP_00667342.1| NADH dehydrogenase (quinone) [;  PMID:;
50.          3          594          54          97.36          0.0e+00
     gi|50875572|emb|CAG35412.1| probable NADP-reducing hydroge;  PMID:;
     gi|51244535|ref|YP_064419.1| NADP-reducing hydrogenase, 51 ;  PMID:;
51.          8          596          54          96.87          0.0e+00
     gi|77684581|ref|ZP_00800007.1| NADH dehydrogenase (quinone) [;  PMID:;
52.          4          525          54          85.83          0.0e+00
     gi|22652021|gb|AAN03565.1| hydrogenase large diaphorase s;  PMID:;
53.          8          597          54          97.03          0.0e+00
     gi|85860696|ref|YP_462898.1| NADH:ubiquinone oxidoreductase;  PMID:;
54.          2          525          54          86.16          0.0e+00
     gi|22971897|ref|ZP_00018811.1| hypothetical protein [Chlorofl;  PMID:;
55.          8          593          54          96.38          0.0e+00
     gi|39995452|ref|NP_951403.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|39982215|gb|AAR33676.1| NADH dehydrogenase I, F subuni;  PMID:;
56.          8          597          53          97.03          0.0e+00
     gi|85860877|ref|YP_463079.1| NADH:ubiquinone oxidoreductase;  PMID:;
     gi|85723968|gb|ABC78911.1| NADH:ubiquinone oxidoreductase;  PMID:;
57.          9          594          53          96.38          0.0e+00
     gi|67915081|gb|EAM64408.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|67938723|ref|ZP_00531244.1| NADH dehydrogenase (quinone) [;  PMID:;
58.          5          595          53          97.20          0.0e+00
     gi|23020351|ref|ZP_00060054.1| hypothetical protein [Clostrid;  PMID:;
59.          8          593          53          96.38          0.0e+00
     gi|67875538|ref|ZP_00504834.1| NADH dehydrogenase (ubiquinone;  PMID:;
     gi|67850569|gb|EAM46145.1| NADH dehydrogenase (ubiquinone;  PMID:;
60.          8          521          53          84.51          0.0e+00
     gi|7427777|pir||S75536 NADH2 dehydrogenase (ubiquinon;  PMID:8905231;
     gi|1771717|emb|CAA66209.1| hydrogenase subunit [Synechocy;  PMID:8980640;
     gi|16330689|ref|NP_441417.1| hydrogenase subunit [Synechocy;  PMID:8905231,8590279;
     gi|1653181|dbj|BAA18097.1| hydrogenase subunit [Synechocy;  PMID:8590279,8905231;
61.          8          593          52          96.38          0.0e+00
     gi|82744630|ref|ZP_00907145.1| NADH:ubiquinone oxidoreductase;  PMID:;
62.          8          593          52          96.38          0.0e+00
     gi|71492497|gb|EAO24801.1| NADH dehydrogenase (quinone) [;  PMID:;
63.          7          536          52          87.15          0.0e+00
     gi|7431973|pir||F72401 NADP-reducing hydrogenase, sub;  PMID:10360571;
     gi|15643000|ref|NP_228042.1| NADP-reducing hydrogenase, sub;  PMID:10360571;
     gi|4980726|gb|AAD35319.1| NADP-reducing hydrogenase, sub;  PMID:10360571;
64.          11          529          52          85.34          0.0e+00
     gi|81299090|ref|YP_399298.1| NADH dehydrogenase (quinone) [;  PMID:;
65.          11          529          52          85.34          0.0e+00
     gi|56686202|dbj|BAD79424.1| NADH dehydrogenase I chain F [;  PMID:;
66.          6          529          52          86.16          0.0e+00
     gi|3947771|emb|CAA73873.1| hoxF [Synechococcus sp. PCC 63;  PMID:9541559;
67.          7          596          52          97.03          0.0e+00
     gi|15644176|ref|NP_229225.1| Fe-hydrogenase, subunit beta [;  PMID:10360571;
     gi|4981989|gb|AAD36495.1| Fe-hydrogenase, subunit beta [;  PMID:10360571;
     gi|7431974|pir||F72256 Fe-hydrogenase, subunit beta -;  PMID:10360571;
     gi|2865516|gb|AAC02685.1| Fe-hydrogenase beta subunit [T;  PMID:10482784;
68.          4          604          52          98.85          0.0e+00
     gi|23056344|ref|ZP_00082379.1| hypothetical protein [Geobacte;  PMID:;
69.          6          594          52          96.87          0.0e+00
     gi|31747592|gb|AAO38266.1| NADP-reducing hydrogenase subu;  PMID:12808145;
70.          3          536          52          87.81          0.0e+00
     gi|23055810|ref|ZP_00081890.1| hypothetical protein [Geobacte;  PMID:;
71.          14          528          52          84.68          0.0e+00
     gi|77918523|ref|YP_356338.1| NADH dehydrogenase I chain F [;  PMID:;
72.          8          597          51          97.03          0.0e+00
     gi|88933090|ref|ZP_01138771.1| NADH dehydrogenase (quinone) [;  PMID:;
73.          8          606          51          98.52          0.0e+00
     gi|57234357|ref|YP_181590.1| hydrogenase subunit HymB, puta;  PMID:;
     gi|57224805|gb|AAW39862.1| hydrogenase subunit HymB, puta;  PMID:;
74.          8          597          51          97.03          0.0e+00
     gi|73748666|ref|YP_307905.1| hydrogenase subunit HymB [Deha;  PMID:16116419;
     gi|73660382|emb|CAI82989.1| hydrogenase subunit HymB [Deha;  PMID:;
75.          10          523          51          84.51          0.0e+00
     gi|93453747|gb|EAT04123.1| NADH dehydrogenase (quinone) [;  PMID:;
76.          8          593          51          96.38          0.0e+00
     gi|91203919|emb|CAJ71572.1| similar to proton-translocatin;  PMID:;
77.          8          538          51          87.31          0.0e+00
     gi|71836642|ref|ZP_00676410.1| NADH dehydrogenase (ubiquinone;  PMID:;
78.          7          599          51          97.53          0.0e+00
     gi|2622670|gb|AAB86023.1| NADP-reducing hydrogenase, sub;  PMID:9371463;
     gi|15679545|ref|NP_276662.1| NADP-reducing hydrogenase, sub;  PMID:9371463;
     gi|7427778|pir||F69073 NADP-reducing hydrogenase (EC ;  PMID:9371463;
79.          10          491          50          79.24          0.0e+00
     gi|93449984|gb|EAT01388.1| NADH dehydrogenase (quinone) [;  PMID:;
80.          117          529          47          67.87          0.0e+00
     gi|7431972|pir||T11903 NADH2 dehydrogenase (ubiquinon;  PMID:;
81.          116          531          47          68.37          0.0e+00
     gi|5650749|emb|CAB51634.1| putative NADH-ubiquinone oxido;  PMID:;
82.          127          530          46          66.39          0.0e+00
     gi|30249732|ref|NP_841802.1| Respiratory-chain NADH dehydro;  PMID:12700255;
     gi|30180769|emb|CAD85683.1| Respiratory-chain NADH dehydro;  PMID:12700255;
83.          125          529          44          66.56          0.0e+00
84.          116          524          44          67.22          0.0e+00
     gi|23018404|ref|ZP_00058121.1| hypothetical protein [Thermobi;  PMID:;
85.          129          530          43          66.06          0.0e+00
     gi|22977697|ref|ZP_00023484.1| hypothetical protein [Ralstoni;  PMID:;
86.          109          530          42          69.36          0.0e+00
87.          117          523          42          66.89          0.0e+00
     gi|7473202|pir||F75387 NADH dehydrogenase I, F subuni;  PMID:10567266;
     gi|15806512|ref|NP_295223.1| NADH dehydrogenase I, F subuni;  PMID:10567266;
     gi|6459262|gb|AAF11067.1| NADH dehydrogenase I, F subuni;  PMID:10567266;
88.          116          530          42          68.20          0.0e+00
     gi|21113686|gb|AAM41796.1| NADH-ubiquinone oxidoreductase;  PMID:12024217;
     gi|66767918|ref|YP_242680.1| NADH-ubiquinone oxidoreductase;  PMID:15899963;
     gi|66573250|gb|AAY48660.1| NADH-ubiquinone oxidoreductase;  PMID:15899963;
     gi|21231955|ref|NP_637872.1| NADH-ubiquinone oxidoreductase;  PMID:12024217;
89.          7          521          41          84.68          0.0e+00
     gi|22962720|ref|ZP_00010326.1| hypothetical protein [Rhodopse;  PMID:;
90.          97          528          41          71.00          0.0e+00
     gi|25285051|pir||AE0311 NADH2 dehydrogenase (ubiquinon;  PMID:11586360;
91.          162          539          41          62.11          0.0e+00
     gi|21289763|gb|EAA01908.1| (AAAB01000962) ebiP47 [Anophel;  PMID:;
92.          109          530          41          69.36          0.0e+00
     gi|15836913|ref|NP_297601.1| NADH-ubiquinone oxidoreductase;  PMID:10910347;
     gi|9105133|gb|AAF83121.1| NADH-ubiquinone oxidoreductase;  PMID:10910347;
     gi|11253223|pir||H82821 NADH-ubiquinone oxidoreductase;  PMID:;
93.          116          502          41          63.59          0.0e+00
     gi|349637|gb|AAA16062.1| NADH dehydrogenase subunit ;  PMID:8234329;
94.          102          527          40          70.02          0.0e+00
     gi|16765651|ref|NP_461266.1| NADH dehydrogenase I chain F [;  PMID:11677609;
     gi|56412779|ref|YP_149854.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|56127036|gb|AAV76542.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|20141542|sp|P33901|NUOF_SALTY NADH-quinone oxidoreductase ch;  PMID:8234329,11677609;
     gi|16420865|gb|AAL21225.1| NADH dehydrogenase I chain F [;  PMID:11677609;
95.          104          527          40          69.69          0.0e+00
     gi|397903|emb|CAA48365.1| NADH dehydrogenase I, subunit ;  PMID:7690854;
     gi|541151|pir||S38315 NADH dehydrogenase I chain nuo;  PMID:7690854;
96.          102          527          40          70.02          0.0e+00
     gi|29141055|ref|NP_804397.1| NADH dehydrogenase I chain F [;  PMID:12644504;
     gi|16503548|emb|CAD07556.1| NADH dehydrogenase I chain F [;  PMID:11677608;
     gi|25285050|pir||AB0797 NADH2 dehydrogenase (ubiquinon;  PMID:11677608;
     gi|16761249|ref|NP_456866.1| NADH dehydrogenase I chain F [;  PMID:11677608;
     gi|29136681|gb|AAO68246.1| NADH dehydrogenase I chain F [;  PMID:12644504;
97.          100          536          40          71.83          0.0e+00
     gi|29608500|dbj|BAC72554.1| putative NADH dehydrogenase I ;  PMID:11572948,12692562;
     gi|29831385|ref|NP_826019.1| NADH dehydrogenase I chain F [;  PMID:11572948;
98.          94          525          40          71.00          0.0e+00
     gi|23473017|ref|ZP_00128336.1| hypothetical protein [Pseudomo;  PMID:;
99.          112          527          40          68.37          0.0e+00
     gi|27380023|ref|NP_771552.1| NADH ubiquinone oxidoreductase;  PMID:12597275;
     gi|27353177|dbj|BAC50177.1| NADH ubiquinone oxidoreductase;  PMID:12597275,12597279;
100.          7          521          40          84.68          0.0e+00
     gi|15890286|ref|NP_355958.1| AGR_L_349p [Agrobacterium tume;  PMID:11743194;
     gi|15158483|gb|AAK88743.1| AGR_L_349p [Agrobacterium tume;  PMID:;
     gi|17938396|ref|NP_535185.1| NADH dehydrogenase I chain F [;  PMID:11743193;
     gi|17743210|gb|AAL45501.1| NADH dehydrogenase I chain F [;  PMID:11743193;
     gi|25285052|pir||E98152 NAD-dependent formate dehydrog;  PMID:11743194;
     gi|25285053|pir||AG3135 NADH dehydrogenase I chain F n;  PMID:11743193;
101.          104          527          40          69.69          0.0e+00
     gi|431020|gb|AAA03537.1| NADH dehydrogenase ;  PMID:;
102.          104          527          40          69.69          0.0e+00
     gi|24113656|ref|NP_708166.1| NADH dehydrogenase I chain F [;  PMID:12384590;
     gi|75187066|ref|ZP_00700333.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|30041965|gb|AAP17691.1| NADH dehydrogenase I chain F [;  PMID:12704152;
     gi|75177928|ref|ZP_00697990.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|25285041|pir||H91024 NADH dehydrogenase I chain F E;  PMID:11258796;
     gi|30063710|ref|NP_837881.1| NADH dehydrogenase I chain F [;  PMID:12704152;
     gi|24052720|gb|AAN43873.1| NADH dehydrogenase I chain F [;  PMID:12384590;
     gi|73856279|gb|AAZ88986.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|13362638|dbj|BAB36591.1| NADH dehydrogenase I chain F [;  PMID:10734605,11108008,11111050,11258796;
     gi|75230335|ref|ZP_00716825.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|15802831|ref|NP_288858.1| NADH dehydrogenase I chain F [;  PMID:11206551;
     gi|12516634|gb|AAG57413.1| NADH dehydrogenase I chain F [;  PMID:11206551;
     gi|82544762|ref|YP_408709.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|74312802|ref|YP_311221.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|75196327|ref|ZP_00706397.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|81246173|gb|ABB66881.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|15832422|ref|NP_311195.1| NADH dehydrogenase I chain F [;  PMID:11258796,11111050,11108008,10734605;
     gi|75238067|ref|ZP_00722072.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|25285043|pir||A85869 NADH dehydrogenase I chain F [;  PMID:11206551;
103.          104          527          40          69.69          0.0e+00
     gi|26248671|ref|NP_754711.1| NADH dehydrogenase I chain F [;  PMID:12471157;
     gi|26109076|gb|AAN81279.1| NADH dehydrogenase I chain F [;  PMID:12471157;
     gi|91073150|gb|ABE08031.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|91211576|ref|YP_541562.1| NADH dehydrogenase I chain F [;  PMID:;
104.          104          527          40          69.69          0.0e+00
     gi|1799651|dbj|BAA16118.1| NADH DEHYDROGENASE I CHAIN F (;  PMID:9205837;
     gi|2506953|sp|P31979|NUOF_ECOLI NADH-quinone oxidoreductase ch;  PMID:7690854,8157582,9278503,9205837,8366049;
     gi|16130219|ref|NP_416787.1| NADH:ubiquinone oxidoreductase;  PMID:9278503;
     gi|7427775|pir||B65000 NADH2 dehydrogenase (ubiquinon;  PMID:7690854,8366049,7607227,9278503;
     gi|1799645|dbj|BAA16113.1| NADH:ubiquinone oxidoreductase;  PMID:9205837;
     gi|75512756|ref|ZP_00735258.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|83588267|ref|ZP_00926892.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|89109102|ref|AP_002882.1| NADH:ubiquinone oxidoreductase;  PMID:;
     gi|75243095|ref|ZP_00726801.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|82777692|ref|YP_404041.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|75259742|ref|ZP_00731044.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|1788620|gb|AAC75344.1| NADH:ubiquinone oxidoreductase;  PMID:9278503;
     gi|81241840|gb|ABB62550.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|75211687|ref|ZP_00711766.1| COG1894: NADH:ubiquinone oxido;  PMID:;
105.          116          527          40          67.71          0.0e+00
     gi|9719442|gb|AAF97802.1| NADH dehydrogenase I subunit F;  PMID:12118882;
106.          109          529          39          69.19          0.0e+00
     gi|16126190|ref|NP_420754.1| NADH dehydrogenase I, F subuni;  PMID:11259647;
     gi|13423406|gb|AAK23922.1| NADH dehydrogenase I, F subuni;  PMID:11259647;
     gi|25285042|pir||F87490 NADH dehydrogenase I, F subuni;  PMID:11259647;
107.          112          527          39          68.37          0.0e+00
     gi|82699684|ref|YP_414258.1| Respiratory-chain NADH dehydro;  PMID:;
     gi|82615785|emb|CAJ10783.1| Respiratory-chain NADH dehydro;  PMID:;
     gi|25285046|pir||AC3396 NADH2 dehydrogenase (ubiquinon;  PMID:11756688;
     gi|62289756|ref|YP_221549.1| NuoF, NADH dehydrogenase I, F ;  PMID:;
     gi|62195888|gb|AAX74188.1| NuoF, NADH dehydrogenase I, F ;  PMID:;
     gi|17983129|gb|AAL52334.1| NADH-QUINONE OXIDOREDUCTASE CH;  PMID:11756688;
     gi|17987436|ref|NP_540070.1| NADH-QUINONE OXIDOREDUCTASE CH;  PMID:12271122,11756688;
108.          6          521          39          84.84          0.0e+00
     gi|28207554|gb|AAO32145.1| NAD-linked formate dehydrogena;  PMID:;
109.          112          527          39          68.37          0.0e+00
     gi|23501694|ref|NP_697821.1| NADH dehydrogenase I, F subuni;  PMID:12271122;
     gi|23347616|gb|AAN29736.1| NADH dehydrogenase I, F subuni;  PMID:;
110.          91          540          39          73.97          0.0e+00
     gi|24372603|ref|NP_716645.1| NADH dehydrogenase I, F subuni;  PMID:12368813;
     gi|24346628|gb|AAN54090.1| NADH dehydrogenase I, F subuni;  PMID:12368813;
111.          3          521          39          85.34          0.0e+00
     gi|3724144|emb|CAA11234.1| NAD-dependent formate dehydrog;  PMID:9756865;
112.          112          527          39          68.37          0.0e+00
     gi|17935175|ref|NP_531965.1| NADH ubiquinone oxidoreductase;  PMID:11743193;
     gi|15156324|gb|AAK87070.1| AGR_C_2350p [Agrobacterium tum;  PMID:;
     gi|25285044|pir||E97514 NADH dehydrogenase I chain F1 ;  PMID:11743194;
     gi|15888604|ref|NP_354285.1| hypothetical protein AGR_C_235;  PMID:11743194;
     gi|25285045|pir||AC2733 NADH ubiquinone oxidoreductase;  PMID:11743193;
     gi|17739680|gb|AAL42281.1| NADH ubiquinone oxidoreductase;  PMID:11743193;
113.          93          534          39          72.65          0.0e+00
     gi|23105375|ref|ZP_00091831.1| hypothetical protein [Azotobac;  PMID:;
114.          112          534          39          69.52          0.0e+00
     gi|23109559|ref|ZP_00095737.1| hypothetical protein [Novosphi;  PMID:;
115.          112          537          39          70.02          0.0e+00
     gi|22967570|ref|ZP_00015163.1| hypothetical protein [Rhodospi;  PMID:;
116.          112          529          39          68.70          0.0e+00
     gi|266651|sp|P29913|NQO1_PARDE NADH-quinone oxidoreductase ch;  PMID:1905152,1909571;
     gi|94693|pir||A39588 NADH2 dehydrogenase (ubiquinon;  PMID:1905152,1909571,1605643;
     gi|150598|gb|AAA25585.1| NADH dehydrogenase ;  PMID:1905152;
117.          112          526          39          68.20          0.0e+00
     gi|27312012|gb|AAO00970.1| NADH dehydrogenase I chain F [;  PMID:12867468;
     gi|42453310|ref|ZP_00153217.1| COG1894: NADH:ubiquinone oxido;  PMID:;
118.          112          529          39          68.70          0.0e+00
     gi|7387959|sp|O07948|NUOF_RHOCA NADH-quinone oxidoreductase ch;  PMID:9108316;
     gi|3282565|gb|AAC24991.1| NUOF [Rhodobacter capsulatus] ;  PMID:;
     gi|1938240|emb|CAA71232.1| complex I 51kDa subunit [Rhodo;  PMID:9108316;
     gi|2182080|emb|CAA71013.1| NADH:ubiquinone oxidoreductase;  PMID:9219542;
119.          93          528          39          71.66          0.0e+00
     gi|11350643|pir||F83316 NADH dehydrogenase I chain F P;  PMID:10984043;
     gi|94413139|ref|ZP_01293030.1| hypothetical protein PaerP_010;  PMID:;
     gi|15597837|ref|NP_251331.1| NADH dehydrogenase I chain F [;  PMID:10984043;
     gi|9948709|gb|AAG06029.1| NADH dehydrogenase I chain F [;  PMID:10984043;
120.          112          535          38          69.69          0.0e+00
     gi|23013439|ref|ZP_00053333.1| hypothetical protein [Magnetos;  PMID:;
121.          112          539          38          70.35          0.0e+00
     gi|13471402|ref|NP_102968.1| NADH-ubiquinone dehydrogenase ;  PMID:11214968;
     gi|14022144|dbj|BAB48754.1| NADH-ubiquinone dehydrogenase ;  PMID:11214968;
122.          112          527          38          68.37          0.0e+00
     gi|22964872|ref|ZP_00012478.1| hypothetical protein [Rhodopse;  PMID:;
123.          94          545          38          74.30          0.0e+00
     gi|82714544|gb|EAP49624.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|26990817|ref|NP_746242.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|24985823|gb|AAN69706.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|82738362|ref|ZP_00901196.1| NADH-quinone oxidoreductase, F;  PMID:;
124.          112          526          38          68.20          0.0e+00
125.          116          531          38          68.37          0.0e+00
     gi|15616778|ref|NP_239990.1| (NC_002528) NADH dehydrogenase;  PMID:10993077;
     gi|11133964|sp|P57256|NUOF_BUCAI NADH dehydrogenase I chain F (;  PMID:10993077;
     gi|10038841|dbj|BAB12876.1| NADH dehydrogenase I chain F [;  PMID:10993077;
126.          112          526          38          68.20          0.0e+00
     gi|3860683|emb|CAA14584.1| NADH DEHYDROGENASE I CHAIN F (;  PMID:9823893;
     gi|7427773|pir||A71721 NADH2 dehydrogenase (ubiquinon;  PMID:9823893;
     gi|15603992|ref|NP_220507.1| NADH DEHYDROGENASE I CHAIN F (;  PMID:9823893;
     gi|7387969|sp|Q9ZE33|NUOF_RICPR NADH-quinone oxidoreductase ch;  PMID:9823893;
127.          112          529          38          68.70          0.0e+00
     gi|22957140|ref|ZP_00004856.1| hypothetical protein [Rhodobac;  PMID:;
128.          112          526          38          68.20          0.0e+00
     gi|25285049|pir||C97719 NADH2 dehydrogenase (ubiquinon;  PMID:11557893;
     gi|15892078|ref|NP_359792.1| NADH dehydrogenase I chain F [;  PMID:11557893,11030655;
     gi|20139048|sp|Q92JB2|NUOF_RICCN NADH-quinone oxidoreductase ch;  PMID:11557893;
     gi|15619200|gb|AAL02693.1| NADH dehydrogenase I chain F [;  PMID:11030655,11557893;
129.          103          545          38          72.82          0.0e+00
     gi|25008857|sp|Q8K9Y3|NUOF_BUCAP NADH-quinone oxidoreductase ch;  PMID:12089438;
     gi|21623053|gb|AAM67719.1| NADH dehydrogenase I chain F [;  PMID:12089438;
     gi|21672441|ref|NP_660508.1| NADH dehydrogenase I chain F [;  PMID:12089438;
130.          112          539          37          70.35          0.0e+00
     gi|7387963|sp|P56912|NUOF1_RHIME NADH-quinone oxidoreductase ch;  PMID:11481430;
     gi|5650740|emb|CAB51626.1| nuoF1 [Sinorhizobium meliloti];  PMID:;
     gi|15965023|ref|NP_385376.1| NADH DEHYDROGENASE I CHAIN F T;  PMID:11481430,11474104;
     gi|15074202|emb|CAC45849.1| NADH DEHYDROGENASE I CHAIN F T;  PMID:11481430;
131.          188          528          37          56.01          0.0e+00
     gi|14043258|gb|AAH07619.1| Unknown (protein for IMAGE:335;  PMID:;
132.          87          517          36          70.84          0.0e+00
     gi|21593325|gb|AAM65274.1| NADH dehydrogenase [Arabidopsi;  PMID:12093376;
133.          187          534          36          57.17          0.0e+00
     gi|7684616|gb|AAF08194.2| NADH:ubiquinone oxidoreductase;  PMID:11357863;
134.          78          527          36          73.97          0.0e+00
     gi|19526814|ref|NP_598427.1| NADH dehydrogenase (ubiquinone;  PMID:12477932,12466851;
     gi|47117274|sp|Q91YT0|NUBM_MOUSE NADH-ubiquinone oxidoreductase;  PMID:;
     gi|26344485|dbj|BAC35893.1| unnamed protein product [Mus m;  PMID:10349636,11042159,11076861,11217851;
     gi|20884941|ref|XP_123330.1| (XM_123330) similar to NADH de;  PMID:;
     gi|15928709|gb|AAH14818.1| NADH dehydrogenase (ubiquinone;  PMID:12477932;
     gi|27469887|gb|AAH41682.1| NADH dehydrogenase (ubiquinone;  PMID:12477932;
135.          92          527          36          71.66          0.0e+00
     gi|55236257|gb|EAA13847.3| ENSANGP00000012416 [Anopheles ;  PMID:;
     gi|58392209|ref|XP_319184.2| ENSANGP00000012416 [Anopheles ;  PMID:;
136.          87          517          36          70.84          0.0e+00
     gi|30387597|gb|AAP31964.1| At5g08530 [Arabidopsis thalian;  PMID:;
     gi|9759347|dbj|BAB10002.1| NADH dehydrogenase [Arabidopsi;  PMID:9405937;
     gi|20260144|gb|AAM12970.1| NADH dehydrogenase [Arabidopsi;  PMID:;
     gi|15242306|ref|NP_196470.1| FMN binding / NADH dehydrogena;  PMID:;
137.          91          527          36          71.83          0.0e+00
     gi|14198176|gb|AAH08146.1| NDUFV1 protein [Homo sapiens] ;  PMID:;
138.          97          526          36          70.68          0.0e+00
     gi|77748340|gb|AAI06321.1| Ndufv1-prov protein [Xenopus l;  PMID:12454917;
     gi|27370996|gb|AAH41320.1| Ndufv1-prov protein [Xenopus l;  PMID:;
139.          87          517          36          70.84          0.0e+00
140.          94          526          36          71.17          0.0e+00
     gi|34328784|gb|AAQ63696.1| NADH:ubiquinone oxidoreductase;  PMID:;
141.          82          528          36          73.48          0.0e+00
     gi|1076668|pir||S52261 NADH2 dehydrogenase (ubiquinon;  PMID:;
     gi|639834|emb|CAA58823.1| NADH dehydrogenase [Solanum tu;  PMID:;
142.          102          527          35          70.02          0.0e+00
     gi|6503227|gb|AAF14649.1|AF163772_9 NADH dehydrogenase [Leishmania;  PMID:;
     gi|13122209|emb|CAC32247.1| NADH dehydrogenase [Leishmania;  PMID:9477341;
143.          68          537          35          77.27          0.0e+00
     gi|45550452|ref|NP_611238.2| CG11423-PA [Drosophila melanog;  PMID:10731132;
     gi|45445490|gb|AAF57825.3| CG11423-PA [Drosophila melanog;  PMID:10731132;
144.          2          531          35          87.15          0.0e+00
     gi|123467|sp|P22317|HOXF_ALCEU NAD-reducing hydrogenase hoxS ;  PMID:2188945,2496982;
     gi|141947|gb|AAC06140.1| NAD-reducing hydrogenase [Rals;  PMID:2188945,1377901;
     gi|95476|pir||A35385 hydrogen dehydrogenase (EC 1.1;  PMID:2496982,2188945;
     gi|32527091|gb|AAP85841.1| NAD-reducing hydrogenase diaph;  PMID:;
145.          78          525          35          73.64          0.0e+00
     gi|108828|pir||A39362 NADH2 dehydrogenase (ubiquinon;  PMID:1900194,2034666;
     gi|548387|sp|P25708|NUBM_BOVIN NADH-ubiquinone oxidoreductase;  PMID:2034666,1900194;
146.          75          534          35          75.62          0.0e+00
     gi|1408306|gb|AAB03672.1| QinA ;  PMID:;
147.          78          525          35          73.64          0.0e+00
148.          78          527          35          73.97          0.0e+00
     gi|3184148|emb|CAA76757.1| NADH:ubiquinone oxidoreductase;  PMID:;
149.          78          527          35          73.97          0.0e+00
     gi|23574759|dbj|BAC20599.1| NADH dehydrogenase (ubiquinone;  PMID:;
     gi|62510804|sp|Q8HXQ9|NUBM_MACFA NADH-ubiquinone oxidoreductase;  PMID:;
150.          78          527          35          73.97          0.0e+00
     gi|48145595|emb|CAG33020.1| NDUFV1 [Homo sapiens] ;  PMID:;
     gi|20455501|sp|P49821|NUBM_HUMAN NADH-ubiquinone oxidoreductase;  PMID:9571201,10931946,12477932,1478657,8288251,10080174;
     gi|3095113|gb|AAC39722.1| NADH:ubiquinone dehydrogenase ;  PMID:9571201;
     gi|3136152|gb|AAC39750.1| NADH:ubiquinone dehydrogenase ;  PMID:9571201;
     gi|7427772|pir||JE0092 NADH2 dehydrogenase (ubiquinon;  PMID:1478657,8288251,9571201;
     gi|15990511|gb|AAH15645.1| NADH dehydrogenase (ubiquinone;  PMID:;
     gi|20149568|ref|NP_009034.2| NADH dehydrogenase (ubiquinone;  PMID:9892733,9571201,8288251,1478657;
     gi|5138912|gb|AAD40373.1| 51kDa subunit of NADH dehydrog;  PMID:;
151.          96          527          34          71.00          0.0e+00
     gi|15425872|gb|AAK97627.1| NADH dehydrogenase complex I 5;  PMID:12081465;
152.          73          530          34          75.29          0.0e+00
     gi|17531727|ref|NP_496376.1| NADH Ubiquinone Oxidoreductase;  PMID:12529635,11410594,11035803;
     gi|3874218|emb|CAA90435.1| Hypothetical protein C09H10.3 ;  PMID:9851916;
     gi|7495786|pir||T19160 hypothetical protein C09H10.3 ;  PMID:;
153.          76          534          34          75.45          0.0e+00
     gi|7297065|gb|AAF52334.1| CG9140-PA [Drosophila melanoga;  PMID:10731132;
     gi|15291595|gb|AAK93066.1| GM14163p [Drosophila melanogas;  PMID:;
     gi|19920794|ref|NP_608987.1| CG9140-PA [Drosophila melanoga;  PMID:10731132;
154.          57          525          34          77.10          0.0e+00
     gi|163412|gb|AAA30661.1| NADH dehydrogenase ;  PMID:2034666;
155.          75          533          33          75.45          0.0e+00
     gi|1556376|emb|CAA45744.1| 51kDa subunit of NADH:ubiquino;  PMID:8365409;
     gi|2499312|sp|Q92406|NUBM_ASPNG NADH-ubiquinone oxidoreductase;  PMID:8365409;
156.          75          546          33          77.59          0.0e+00
     gi|83779|pir||S17663 NADH2 dehydrogenase (ubiquinon;  PMID:1832016;
     gi|3032|emb|CAA39676.1| 51 kD subunit of NADH dehydrog;  PMID:1832016,8365409;
157.          75          546          33          77.59          0.0e+00
     gi|28918753|gb|EAA28423.1| NADH-UBIQUINONE OXIDOREDUCTASE;  PMID:12712197;
     gi|85086245|ref|XP_957659.1| NADH-UBIQUINONE OXIDOREDUCTASE;  PMID:12712197;
     gi|67477366|sp|P24917|NUBM_NEUCR NADH-ubiquinone oxidoreductase;  PMID:1832016;
     gi|39979235|emb|CAE85605.1| NADH2 dehydrogenase (ubiquinon;  PMID:;
     gi|32405500|ref|XP_323363.1| NADH-UBIQUINONE OXIDOREDUCTASE;  PMID:12712197;
158.          2          532          33          87.31          0.0e+00
     gi|1617570|gb|AAB57889.1| NAD-reducing hydrogenase alpha;  PMID:9141690;
159.          81          550          32          77.27          0.0e+00
160.          77          524          29          73.64          0.0e+00
161.          6          595          0          97.03          0.0e+00
     gi|77637793|gb|EAO80229.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|77686400|ref|ZP_00801752.1| NADH dehydrogenase (quinone) [;  PMID:;
162.          8          595          0          96.71          0.0e+00
     gi|89896716|ref|YP_520203.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|89336164|dbj|BAE85759.1| NADH dehydrogenase I chain F [;  PMID:;
163.          8          595          0          96.71          0.0e+00
     gi|98660579|dbj|GAA02160.1| unnamed protein product [Pelot;  PMID:;
164.          8          606          0          98.52          0.0e+00
     gi|73660241|emb|CAI82848.1| putative [Fe] hydrogenase, Hym;  PMID:;
     gi|73748525|ref|YP_307764.1| putative [Fe] hydrogenase, Hym;  PMID:;
165.          4          597          0          97.69          0.0e+00
     gi|77920299|ref|YP_358114.1| NADH:ubiquinone oxidoreductase;  PMID:;
166.          8          593          0          96.38          0.0e+00
     gi|88924522|gb|EAR43521.1| NADH dehydrogenase (quinone) [;  PMID:;
     gi|88945915|ref|ZP_01149054.1| NADH dehydrogenase (quinone) [;  PMID:;
167.          17          593          0          94.89          0.0e+00
     gi|88933975|ref|ZP_01139619.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|88918940|gb|EAR38115.1| NADH dehydrogenase I, F subuni;  PMID:;
168.          8          535          0          86.82          0.0e+00
     gi|50877098|emb|CAG36938.1| probable NADH dehydrogenase (u;  PMID:;
     gi|51246061|ref|YP_065945.1| NADH dehydrogenase (ubiquinone;  PMID:15305914;
169.          8          527          0          85.50          0.0e+00
     gi|17130097|dbj|BAB72709.1| hydrogenase subunit [Nostoc sp;  PMID:11759840;
     gi|17228247|ref|NP_484795.1| hydrogenase subunit [Nostoc sp;  PMID:11759840;
     gi|25285054|pir||AF1900 hydrogenase chain [imported] -;  PMID:11759840;
170.          8          525          0          85.17          0.0e+00
     gi|76258514|ref|ZP_00766169.1| Respiratory-chain NADH dehydro;  PMID:;
171.          17          521          0          83.03          0.0e+00
     gi|87303135|ref|ZP_01085933.1| Respiratory-chain NADH dehydro;  PMID:;
172.          114          523          52          67.38          1.0e-127
     gi|71491241|gb|EAO23572.1| NADH dehydrogenase (quinone) [;  PMID:;
173.          114          523          52          67.38          1.0e-125
     gi|71491247|gb|EAO23578.1| NADH dehydrogenase (quinone) [;  PMID:;
174.          77          524          26          73.64          1.0e-124
175.          77          524          26          73.64          1.0e-124
     gi|19527833|gb|AAL90031.1| AT08706p [Drosophila melanogas;  PMID:;
176.          78          382          37          50.08          1.0e-119
     gi|2135794|pir||A44362 NADH dehydrogenase (ubiquinone;  PMID:1478657,8288251;
177.          6          528          0          86.00          1.0e-119
     gi|71492626|gb|EAO24929.1| NADH dehydrogenase (quinone) [;  PMID:;
178.          130          525          32          65.07          1.0e-117
     gi|19112649|ref|NP_595857.1| (NC_003423) putative respirato;  PMID:11859360;
     gi|7492898|pir||T39761 probable respiratory chain NAD;  PMID:;
     gi|4107329|emb|CAA22670.1| (AL035077) putative respirator;  PMID:11859360;
179.          5          521          0          85.01          1.0e-117
     gi|89359738|ref|ZP_01197558.1| putative NAD-dependent formate;  PMID:;
180.          5          521          42          85.01          1.0e-116
     gi|77740101|ref|ZP_00808590.1| NADH dehydrogenase (quinone) [;  PMID:;
181.          15          523          42          83.69          1.0e-116
     gi|88941314|ref|ZP_01146734.1| putative NAD-dependent formate;  PMID:;
182.          8          522          41          84.68          1.0e-116
     gi|27378248|ref|NP_769777.1| NADH dehydrogenase I chain F [;  PMID:12597275;
     gi|27351395|dbj|BAC48402.1| NADH dehydrogenase I chain F [;  PMID:12597275,12597279;
183.          107          521          0          68.20          1.0e-114
     gi|90426117|ref|YP_534487.1| NADH dehydrogenase (quinone) [;  PMID:;
184.          114          528          49          68.20          1.0e-113
     gi|73659814|emb|CAI82421.1| putative [Fe] hydrogenase, Hym;  PMID:;
     gi|73748098|ref|YP_307337.1| putative [Fe] hydrogenase, Hym;  PMID:16116419;
185.          107          521          48          68.20          1.0e-113
     gi|91975104|ref|YP_567763.1| NADH dehydrogenase (quinone) [;  PMID:;
186.          118          531          47          68.04          1.0e-113
     gi|25285048|pir||E95365 NADH2 dehydrogenase (ubiquinon;  PMID:11474104,11481432;
     gi|17380453|sp|P56913|NUOF2_RHIME NADH-quinone oxidoreductase ch;  PMID:11481432;
     gi|16263282|ref|NP_436075.1| NuoF2 NADH I CHAIN F [Sinorhiz;  PMID:11481432,11474104;
     gi|14523959|gb|AAK65487.1| NuoF2 NADH I CHAIN F [Sinorhiz;  PMID:11481432;
187.          107          522          45          68.37          1.0e-113
     gi|71144386|gb|AAZ24859.1| formate dehydrogenase, beta su;  PMID:;
188.          2          521          41          85.50          1.0e-113
     gi|33600308|ref|NP_887868.1| NAD-dependent formate dehydrog;  PMID:;
     gi|33567907|emb|CAE31820.1| NAD-dependent formate dehydrog;  PMID:;
189.          5          521          41          85.01          1.0e-113
     gi|15966763|ref|NP_387116.1| PUTATIVE NAD-DEPENDENT FORMATE;  PMID:11481430,11474104;
     gi|15076035|emb|CAC47589.1| PUTATIVE NAD-DEPENDENT FORMATE;  PMID:11481430;
190.          11          521          41          84.02          1.0e-113
     gi|78695580|ref|ZP_00860091.1| NADH dehydrogenase (quinone) [;  PMID:;
191.          8          531          40          86.16          1.0e-113
     gi|85858941|ref|YP_461143.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|85722032|gb|ABC76975.1| NADH-quinone oxidoreductase ch;  PMID:;
192.          8          521          40          84.51          1.0e-113
     gi|14025253|dbj|BAB51854.1| NAD-dependent formate dehydrog;  PMID:11214968;
     gi|13474499|ref|NP_106068.1| NAD-dependent formate dehydrog;  PMID:11214968;
193.          114          528          49          68.20          1.0e-112
     gi|57225452|gb|AAW40509.1| [Fe] hydrogenase, HymB subunit;  PMID:;
     gi|57235004|ref|YP_180896.1| [Fe] hydrogenase, HymB subunit;  PMID:15637277;
194.          114          521          49          67.05          1.0e-112
     gi|71491584|gb|EAO23905.1| NADH dehydrogenase (quinone) [;  PMID:;
195.          8          541          40          87.81          1.0e-112
     gi|85722016|gb|ABC76959.1| NADH-quinone oxidoreductase ch;  PMID:17442750;
     gi|85858925|ref|YP_461127.1| NADH-quinone oxidoreductase ch;  PMID:;
196.          107          521          0          68.20          1.0e-112
     gi|47573251|ref|ZP_00243290.1| COG1894: NADH:ubiquinone oxido;  PMID:;
197.          7          521          0          84.68          1.0e-111
     gi|86359331|ref|YP_471223.1| NADH-ubiquinone oxidoreductase;  PMID:;
     gi|86283433|gb|ABC92496.1| NADH-ubiquinone oxidoreductase;  PMID:;
198.          130          530          48          65.90          1.0e-110
     gi|33571656|emb|CAE41149.1| respiratory-chain NADH dehydro;  PMID:;
     gi|33577253|emb|CAE35810.1| respiratory-chain NADH dehydro;  PMID:;
     gi|33602811|ref|NP_890371.1| respiratory-chain NADH dehydro;  PMID:;
     gi|33592012|ref|NP_879656.1| respiratory-chain NADH dehydro;  PMID:;
199.          130          530          48          65.90          1.0e-110
     gi|33574335|emb|CAE38671.1| respiratory-chain NADH dehydro;  PMID:;
     gi|33597906|ref|NP_885549.1| respiratory-chain NADH dehydro;  PMID:;
200.          107          521          47          68.20          1.0e-110
     gi|69936446|ref|ZP_00631272.1| NADH dehydrogenase (quinone) [;  PMID:;
201.          8          521          40          84.51          1.0e-110
     gi|87120636|ref|ZP_01076530.1| formate dehydrogenase, beta su;  PMID:;
202.          3          521          0          85.34          1.0e-109
     gi|71145845|gb|AAZ26318.1| formate dehydrogenase, beta su;  PMID:;
203.          127          530          0          66.39          1.0e-109
     gi|86359439|ref|YP_471331.1| formate dehydrogenase, beta su;  PMID:;
204.          8          527          0          85.50          1.0e-108
     gi|39576682|emb|CAE80846.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|42524473|ref|NP_969853.1| NADH dehydrogenase I, F subuni;  PMID:;
205.          131          529          49          65.57          1.0e-107
     gi|46200217|ref|YP_005884.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|46197845|gb|AAS82257.1| NADH-quinone oxidoreductase ch;  PMID:;
206.          131          529          49          65.57          1.0e-107
     gi|2499313|sp|Q56222|NQO1_THET8 NADH-quinone oxidoreductase su;  PMID:9020134;
     gi|90109662|pdb|2FUG|A Chain A, Crystal Structure Of ;  PMID:;
     gi|55980058|ref|YP_143355.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|55771471|dbj|BAD69912.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|90109678|pdb|2FUG|S Chain S, Crystal Structure Of ;  PMID:;
     gi|1279866|gb|AAA97943.1| NADH dehydrogenase I, subunit ;  PMID:;
     gi|90109654|pdb|2FUG|1 Chain 1, Crystal Structure Of ;  PMID:;
     gi|90109670|pdb|2FUG|J Chain J, Crystal Structure Of ;  PMID:;
207.          107          521          45          68.20          1.0e-107
     gi|82737791|ref|ZP_00900636.1| formate dehydrogenase, beta su;  PMID:;
208.          107          521          45          68.20          1.0e-107
     gi|24983719|gb|AAN67797.1|AE016411_2 formate dehydrogenase, beta su;  PMID:;
     gi|26988908|ref|NP_744333.1| formate dehydrogenase, beta su;  PMID:;
209.          15          521          40          83.36          1.0e-107
     gi|83719980|ref|YP_442161.1| formate dehydrogenase, beta su;  PMID:;
210.          131          530          47          65.73          1.0e-106
     gi|105893372|gb|ABF76537.1| NADH-quinone oxidoreductase, F;  PMID:;
211.          118          531          46          68.04          1.0e-106
     gi|88932155|ref|ZP_01137847.1| NADH-quinone oxidoreductase, F;  PMID:;
212.          131          530          46          65.73          1.0e-106
     gi|67736838|ref|ZP_00487671.1| COG1894: NADH:ubiquinone oxido;  PMID:;
213.          131          530          46          65.73          1.0e-106
     gi|83720620|ref|YP_441619.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|83654445|gb|ABC38508.1| NADH-quinone oxidoreductase, F;  PMID:;
214.          131          530          46          65.73          1.0e-106
     gi|67548298|ref|ZP_00426189.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|67530381|gb|EAM27223.1| NADH-quinone oxidoreductase, F;  PMID:;
215.          131          530          46          65.73          1.0e-106
     gi|77967786|gb|ABB09166.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|84355267|ref|ZP_00980155.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|78067041|ref|YP_369810.1| NADH-quinone oxidoreductase, F;  PMID:;
216.          131          530          46          65.73          1.0e-106
     gi|84362355|ref|ZP_00986982.1| COG1894: NADH:ubiquinone oxido;  PMID:;
217.          117          530          46          68.04          1.0e-106
     gi|77166018|ref|YP_344543.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|76884332|gb|ABA59013.1| NADH-quinone oxidoreductase, F;  PMID:;
218.          107          521          45          68.20          1.0e-106
     gi|70733835|ref|YP_257475.1| formate dehydrogenase, beta su;  PMID:;
219.          107          521          45          68.20          1.0e-106
     gi|85707197|ref|ZP_01038283.1| NAD dependent formate dehydrog;  PMID:;
220.          117          530          45          68.04          1.0e-106
     gi|82410290|gb|ABB74399.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|82702225|ref|YP_411791.1| NADH-quinone oxidoreductase, F;  PMID:;
221.          117          530          45          68.04          1.0e-106
     gi|71549641|ref|ZP_00669832.1| NADH-quinone oxidoreductase, F;  PMID:;
222.          107          521          45          68.20          1.0e-106
     gi|84686201|ref|ZP_01014096.1| NAD dependent formate dehydrog;  PMID:;
223.          108          522          43          68.20          1.0e-106
     gi|90416713|ref|ZP_01224643.1| formate dehydrogenase, beta su;  PMID:;
224.          15          521          39          83.36          1.0e-106
     gi|100122107|ref|ZP_01327962.1| hypothetical protein BpseS_030;  PMID:;
225.          15          521          39          83.36          1.0e-106
     gi|82538363|ref|ZP_00897356.1| hypothetical protein Bpse110_0;  PMID:;
226.          15          521          39          83.36          1.0e-106
     gi|99911790|ref|ZP_01318606.1| hypothetical protein Bpse1_030;  PMID:;
227.          5          521          38          85.01          1.0e-106
     gi|67546816|ref|ZP_00424726.1| NADH dehydrogenase (quinone) [;  PMID:;
228.          118          522          0          66.56          1.0e-106
     gi|67735866|ref|ZP_00486800.1| COG1894: NADH:ubiquinone oxido;  PMID:;
229.          131          536          47          66.72          1.0e-105
     gi|59718962|gb|AAW90367.1| putative NADH dehydrogenase I ;  PMID:;
     gi|59802067|ref|YP_208779.1| NuoF [Neisseria gonorrhoeae FA;  PMID:;
230.          131          536          47          66.72          1.0e-105
     gi|7378792|emb|CAB83334.1| NADH dehydrogenase I chain F [;  PMID:10761919;
     gi|15793048|ref|NP_282870.1| NADH dehydrogenase I chain F [;  PMID:10761919;
     gi|11253228|pir||B81992 NADH2 dehydrogenase (ubiquinon;  PMID:10761919;
231.          131          530          46          65.73          1.0e-105
     gi|74020227|ref|ZP_00690830.1| NADH-quinone oxidoreductase, F;  PMID:;
232.          131          530          46          65.73          1.0e-105
     gi|76580577|gb|ABA50052.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|52209266|emb|CAH35211.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|82535988|ref|ZP_00894998.1| hypothetical protein Bpse110_0;  PMID:;
     gi|53718852|ref|YP_107838.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|100124139|ref|ZP_01329698.1| hypothetical protein BpseS_030;  PMID:;
     gi|90291939|ref|ZP_01211558.1| hypothetical protein Bpse17_02;  PMID:;
     gi|100061225|ref|ZP_01323059.1| hypothetical protein BpseP_030;  PMID:;
     gi|76811124|ref|YP_332849.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|99909789|ref|ZP_01316900.1| hypothetical protein Bpse1_030;  PMID:;
233.          131          530          46          65.73          1.0e-105
     gi|53725814|ref|YP_103429.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|83623815|ref|ZP_00934076.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|100263937|ref|ZP_01338659.1| hypothetical protein Bmal2_030;  PMID:;
     gi|67642187|ref|ZP_00440947.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|52429237|gb|AAU49830.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|85065175|ref|ZP_01026028.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|67647541|ref|ZP_00445782.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|100915606|ref|ZP_01344095.1| hypothetical protein Bmal10_03;  PMID:;
     gi|83620231|ref|ZP_00930653.1| COG1894: NADH:ubiquinone oxido;  PMID:;
234.          131          530          46          65.73          1.0e-105
     gi|100233709|ref|ZP_01334718.1| hypothetical protein Bpse4_030;  PMID:;
235.          107          527          0          69.19          1.0e-105
     gi|11253230|pir||D81222 NADH dehydrogenase I, F chain ;  PMID:10710307;
     gi|15676170|ref|NP_273302.1| NADH dehydrogenase I, F subuni;  PMID:10710307;
     gi|7225468|gb|AAF40700.1| NADH dehydrogenase I, F subuni;  PMID:10710307;
236.          127          530          0          66.39          1.0e-105
     gi|52428226|gb|AAU48819.1| formate dehydrogenase, beta su;  PMID:;
237.          131          527          47          65.24          1.0e-104
     gi|7427776|pir||E70351 NADH dehydrogenase (ubiquinone;  PMID:9537320;
     gi|15606024|ref|NP_213401.1| (NC_000918) NADH dehydrogenase;  PMID:9537320;
     gi|2983201|gb|AAC06800.1| NADH dehydrogenase I chain F [;  PMID:9537320;
     gi|7387960|sp|O66841|NUOF_AQUAE NADH dehydrogenase I chain F (;  PMID:9537320;
238.          107          521          45          68.20          1.0e-104
     gi|104780976|ref|YP_607474.1| formate dehydrogenase, beta su;  PMID:;
239.          118          531          44          68.04          1.0e-104
     gi|86160615|ref|YP_467400.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|85777126|gb|ABC83963.1| NADH-quinone oxidoreductase, F;  PMID:;
240.          107          521          43          68.20          1.0e-104
     gi|74015895|ref|ZP_00686522.1| NADH dehydrogenase (quinone) [;  PMID:;
241.          8          527          39          85.50          1.0e-104
     gi|83360445|gb|EAP63972.1| NADH dehydrogenase (quinone) [;  PMID:;
242.          5          521          38          85.01          1.0e-104
     gi|84361164|ref|ZP_00985844.1| COG1894: NADH:ubiquinone oxido;  PMID:;
243.          127          530          0          66.39          1.0e-104
     gi|45601824|gb|AAS71303.1| NADH dehydrogenase I F subunit;  PMID:;
     gi|45658580|ref|YP_002666.1| NADH dehydrogenase I F subunit;  PMID:;
244.          115          528          0          68.04          1.0e-104
     gi|83372464|ref|ZP_00917244.1| NADH dehydrogenase (quinone) [;  PMID:;
245.          118          531          46          68.04          1.0e-103
     gi|94493700|ref|ZP_01300903.1| hypothetical protein Rgryl_010;  PMID:;
246.          130          530          45          65.90          1.0e-103
     gi|47574912|ref|ZP_00244947.1| COG1894: NADH:ubiquinone oxido;  PMID:;
247.          8          521          39          84.51          1.0e-103
     gi|84499616|ref|ZP_00997904.1| NAD dependent formate dehydrog;  PMID:;
248.          5          521          38          85.01          1.0e-103
     gi|84357172|ref|ZP_00982000.1| COG1894: NADH:ubiquinone oxido;  PMID:;
249.          5          521          37          85.01          1.0e-103
     gi|77966362|gb|ABB07742.1| NADH dehydrogenase (quinone) [;  PMID:;
250.          2          514          0          84.35          1.0e-103
     gi|68234894|ref|ZP_00573946.1| Respiratory-chain NADH dehydro;  PMID:;
     gi|68197475|gb|EAN11795.1| Respiratory-chain NADH dehydro;  PMID:;
251.          127          529          46          66.23          1.0e-102
     gi|71837400|ref|ZP_00677165.1| NADH dehydrogenase (ubiquinone;  PMID:;
252.          130          530          46          65.90          1.0e-102
     gi|56314224|emb|CAI08869.1| NADH dehydrogenase I, chain F ;  PMID:;
     gi|56478181|ref|YP_159770.1| NADH dehydrogenase I, chain F ;  PMID:;
253.          127          530          44          66.39          1.0e-102
     gi|83746302|ref|ZP_00943355.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|83727052|gb|EAP74177.1| NADH-quinone oxidoreductase ch;  PMID:;
254.          131          533          44          66.23          1.0e-102
     gi|67668509|ref|ZP_00465639.1| NADH-quinone oxidoreductase, F;  PMID:;
255.          115          531          43          68.53          1.0e-102
     gi|94968339|ref|YP_590387.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|94550389|gb|ABF40313.1| NADH-quinone oxidoreductase, F;  PMID:;
256.          131          530          0          65.73          1.0e-102
     gi|105892299|gb|ABF75464.1| NADH dehydrogenase (quinone) [;  PMID:;
257.          131          531          45          65.90          1.0e-101
     gi|41409304|ref|NP_962140.1| NuoF [Mycobacterium avium subs;  PMID:;
     gi|41398124|gb|AAS05754.1| NuoF [Mycobacterium avium subs;  PMID:;
258.          127          532          0          66.72          1.0e-101
     gi|17429076|emb|CAD15764.1| probable nadh dehydrogenaseI(c;  PMID:11823852;
     gi|17546776|ref|NP_520178.1| PROBABLE NADH DEHYDROGENASE I ;  PMID:11823852;
259.          127          521          45          64.91          1.0e-100
     gi|34102254|gb|AAQ58620.1| NADH-ubiquinone oxidoreductase;  PMID:;
     gi|34496401|ref|NP_900616.1| NADH-ubiquinone oxidoreductase;  PMID:;
260.          131          525          45          64.91          1.0e-100
     gi|92435309|gb|EAS94640.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|92907009|ref|ZP_01275789.1| NADH-quinone oxidoreductase, F;  PMID:;
261.          130          528          0          65.57          1.0e-100
     gi|15610286|ref|NP_217666.1| PROBABLE NADH DEHYDROGENASE I ;  PMID:9634230;
     gi|13883048|gb|AAK47577.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|54037918|sp|P65568|NUOF_MYCBO NADH-quinone oxidoreductase ch;  PMID:;
     gi|7427774|pir||G70647 NADH2 dehydrogenase (ubiquinon;  PMID:9634230;
     gi|54041669|sp|P65567|NUOF_MYCTU NADH-quinone oxidoreductase ch;  PMID:;
     gi|7387967|sp|P95176|NUOF_MYCTU NADH-quinone oxidoreductase ch;  PMID:9634230,12218036,12788972;
     gi|31794326|ref|NP_856819.1| PROBABLE NADH DEHYDROGENASE I ;  PMID:;
     gi|81252154|ref|ZP_00876754.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|1781218|emb|CAB06289.1| PROBABLE NADH DEHYDROGENASE I ;  PMID:9634230;
     gi|31619922|emb|CAD95266.1| PROBABLE NADH DEHYDROGENASE I ;  PMID:;
     gi|15842726|ref|NP_337763.1| NADH dehydrogenase I, F subuni;  PMID:;
262.          2          514          0          84.35          1.0e-100
     gi|92913999|ref|ZP_01282627.1| NADH-quinone oxidoreductase, F;  PMID:;
263.          115          529          0          68.20          1.0e-100
     gi|54295613|ref|YP_128028.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|53752552|emb|CAH13984.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|53755445|emb|CAH16941.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|54298767|ref|YP_125136.1| NADH dehydrogenase I chain F [;  PMID:;
264.          131          531          45          65.90          1.0e-99
     gi|84384418|gb|EAQ00298.1| putative NADH dehydrogenase I ;  PMID:;
     gi|84494925|ref|ZP_00994044.1| putative NADH dehydrogenase I ;  PMID:;
265.          128          529          45          66.06          3.0e-99
     gi|78701255|ref|ZP_00865707.1| NADH-quinone oxidoreductase, F;  PMID:;
266.          133          525          44          64.58          3.0e-99
     gi|84712419|ref|ZP_01020331.1| NADH-quinone oxidoreductase, F;  PMID:;
267.          127          531          43          66.56          3.0e-99
     gi|82410211|gb|ABB74320.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|82702146|ref|YP_411712.1| NADH-quinone oxidoreductase, F;  PMID:;
268.          38          527          39          80.56          3.0e-99
     gi|85857988|ref|YP_460190.1| NADH-quinone oxidoreductase ch;  PMID:;
     gi|85721079|gb|ABC76022.1| NADH-quinone oxidoreductase ch;  PMID:17442750;
269.          123          531          43          67.22          4.0e-99
     gi|88948539|ref|ZP_01151302.1| NADH-quinone oxidoreductase, F;  PMID:;
270.          115          540          41          70.02          4.0e-99
     gi|67930067|ref|ZP_00523243.1| NADH-quinone oxidoreductase, F;  PMID:;
271.          131          531          43          65.90          6.0e-99
     gi|54016139|dbj|BAD57509.1| putative NADH dehydrogenase I ;  PMID:;
     gi|54024631|ref|YP_118873.1| putative NADH dehydrogenase I ;  PMID:;
272.          121          522          45          66.06          7.0e-99
     gi|89257085|ref|YP_514447.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|89144916|emb|CAJ80264.1| NADH dehydrogenase I, F subuni;  PMID:;
273.          128          531          43          66.39          1.0e-98
     gi|89321250|gb|EAS12738.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|89337666|ref|ZP_01190444.1| NADH-quinone oxidoreductase, F;  PMID:;
274.          131          537          42          66.89          1.0e-98
     gi|21222950|ref|NP_628729.1| NuoF, NADH dehydrogenase subun;  PMID:12000953,8843436;
     gi|5042272|emb|CAB44526.1| NuoF, NADH dehydrogenase subun;  PMID:12000953;
     gi|7387968|sp|Q9XAQ9|NUOF_STRCO NADH-quinone oxidoreductase ch;  PMID:12000953;
     gi|7480289|pir||T34619 NADH2 dehydrogenase (ubiquinon;  PMID:;
275.          121          522          45          66.06          2.0e-98
     gi|56707216|ref|YP_169112.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|56603708|emb|CAG44669.1| NADH dehydrogenase I, F subuni;  PMID:;
276.          121          522          45          66.06          2.0e-98
     gi|62261001|gb|AAX77952.1| unknown protein [synthetic con;  PMID:;
277.          118          526          45          67.22          2.0e-98
     gi|76259278|ref|ZP_00766928.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|76165805|gb|EAO59935.1| NADH-quinone oxidoreductase, F;  PMID:;
278.          140          530          45          64.25          4.0e-98
     gi|68244761|gb|EAN26914.1| NADH-quinone oxidoreductase, F;  PMID:;
279.          131          525          44          64.91          4.0e-98
     gi|78363453|gb|ABB41418.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|78485167|ref|YP_391092.1| NADH-quinone oxidoreductase, F;  PMID:;
280.          121          530          44          67.38          5.0e-98
     gi|29654734|ref|NP_820426.1| NADH dehydrogenase I, F subuni;  PMID:12704232;
     gi|95926778|ref|ZP_01309552.1| hypothetical protein CburR_010;  PMID:;
     gi|29542002|gb|AAO90940.1| NADH dehydrogenase I, F subuni;  PMID:12704232;
281.          134          531          44          65.40          5.0e-98
     gi|71369538|ref|ZP_00659977.1| NADH-quinone oxidoreductase, F;  PMID:;
282.          118          530          38          67.87          5.0e-98
     gi|90440026|gb|EAS65207.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|90579193|ref|ZP_01235003.1| NADH dehydrogenase I, F subuni;  PMID:;
283.          118          530          38          67.87          6.0e-98
     gi|89073313|ref|ZP_01159843.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|89051023|gb|EAR56487.1| NADH dehydrogenase I, F subuni;  PMID:;
284.          121          530          44          67.38          8.0e-98
     gi|94490937|ref|ZP_01298160.1| hypothetical protein CburD_010;  PMID:;
285.          128          531          43          66.39          1.0e-97
     gi|90202942|ref|ZP_01205588.1| NADH-quinone oxidoreductase, F;  PMID:;
286.          127          533          41          66.89          1.0e-97
     gi|76882946|gb|ABA57627.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|77164632|ref|YP_343157.1| NADH-quinone oxidoreductase, F;  PMID:;
287.          7          528          39          85.83          5.0e-97
     gi|83643019|ref|YP_431454.1| NADH:ubiquinone oxidoreductase;  PMID:;
288.          131          534          0          66.39          1.0e-96
     gi|88789749|gb|EAR20873.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|88812971|ref|ZP_01128214.1| NADH dehydrogenase I chain F [;  PMID:;
289.          132          526          42          64.91          2.0e-96
     gi|90588300|ref|ZP_01243952.1| NADH-quinone oxidoreductase, F;  PMID:;
     gi|90435942|gb|EAS61299.1| NADH-quinone oxidoreductase, F;  PMID:;
290.          165          458          35          48.27          3.0e-96
     gi|7709907|gb|AAB29698.2| NADH:ubiquinone oxidoreductase;  PMID:8288251;
291.          119          521          0          66.23          1.0e-95
     gi|89210762|ref|ZP_01189147.1| Respiratory-chain NADH dehydro;  PMID:;
292.          132          525          44          64.74          4.0e-95
     gi|49529929|emb|CAG67641.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|50083953|ref|YP_045463.1| NADH dehydrogenase I chain F [;  PMID:;
293.          134          521          45          63.76          8.0e-95
     gi|71038140|gb|AAZ18448.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|71065155|ref|YP_263882.1| NADH dehydrogenase I, F subuni;  PMID:;
294.          118          529          42          67.71          2.0e-94
     gi|51892729|ref|YP_075420.1| NADH dehydrogenase I subunit F;  PMID:;
     gi|51856418|dbj|BAD40576.1| NADH dehydrogenase I subunit F;  PMID:;
295.          131          531          44          65.90          3.0e-94
     gi|77917824|ref|YP_355639.1| NADH dehydrogenase I, F subuni;  PMID:;
     gi|77543907|gb|ABA87469.1| NADH dehydrogenase I, F subuni;  PMID:;
296.          128          528          43          65.90          5.0e-94
     gi|22125529|ref|NP_668952.1| NADH dehydrogenase I chain F [;  PMID:12142430;
     gi|77636574|ref|ZP_00798647.1| COG1894: NADH:ubiquinone oxido;  PMID:;
     gi|45442151|ref|NP_993690.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|16122769|ref|NP_406082.1| NADH dehydrogenase I chain F [;  PMID:11586360;
     gi|21958428|gb|AAM85203.1| NADH dehydrogenase I chain F [;  PMID:12142430;
     gi|15980542|emb|CAC91353.1| NADH dehydrogenase I chain F [;  PMID:11586360;
     gi|45437015|gb|AAS62567.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|89105748|ref|ZP_01178262.1| COG1894: NADH:ubiquinone oxido;  PMID:;
297.          128          528          43          65.90          7.0e-94
     gi|51590184|emb|CAH21821.1| NADH dehydrogenase I chain F [;  PMID:;
     gi|51596902|ref|YP_071093.1| NADH dehydrogenase I chain F [;  PMID:;
298.          131          533          44          66.23          9.0e-94
     gi|71546900|ref|ZP_00667648.1| NADH dehydrogenase (quinone) [;  PMID:;
299.          128          528          42          65.90          9.0e-94
     gi|77975475|ref|ZP_00831010.1| COG1894: NADH:ubiquinone oxido;  PMID:;
300.          133          531          0          65.57          9.0e-94
     gi|91200367|emb|CAJ73413.1| strongly similar to NADH dehyd;  PMID:;
301.          128          528          42          65.90          1.0e-93
     gi|77961185|ref|ZP_00825029.1| COG1894: NADH:ubiquinone oxido;  PMID:;
302.          149          559          24          67.55          8.0e-88
     gi|6714679|emb|CAB66251.1| putative oxidoreductase. [Stre;  PMID:12000953;
     gi|21221032|ref|NP_626811.1| putative oxidoreductase. [Stre;  PMID:12000953,8843436;
303.          144          526          30          62.93          4.0e-87
     gi|758215|emb|CAA88752.1| (Z48918) unknown [Brevundimona;  PMID:;
304.          253          521          44          44.15          1.0e-85
     gi|11545457|gb|AAG37857.1| NAD-dependent formate dehydrog;  PMID:;
305.          149          559          24          67.55          2.0e-84
     gi|21234156|ref|NP_639733.1| putative oxidoreductase [Strep;  PMID:12000953,9573173;
     gi|13620642|emb|CAC36681.1| putative oxidoreductase [Strep;  PMID:9573173;
306.          95          291          36          32.29          8.0e-77
     gi|19527557|gb|AAL89893.1| (AY084155) RE33648p [Drosophil;  PMID:;
307.          517          606          23          14.66          1.0e-14
     gi|7522122|pir||T18557 probable hydrogenase (EC 1.18.;  PMID:9859986;
     gi|4034791|emb|CAA76373.1| hydrogenase [Nyctotherus ovali;  PMID:9859986;
308.          544          589          25          7.41          2.0e-07
     gi|17369132|sp|Q9KT88|RNFC_VIBCH Electron transport complex pro;  PMID:10952301;
309.          544          589          25          7.41          4.0e-07
     gi|11356115|pir||E82252 RnfC-related protein VC1015 [i;  PMID:10952301;
     gi|9655479|gb|AAF94176.1| RnfC-related protein [Vibrio c;  PMID:10952301;
     gi|15641030|ref|NP_230661.1| electron transport complex pro;  PMID:10952301;
310.          548          591          24          7.08          4.0e-05
     gi|16273572|ref|NP_439827.1| electron transport complex pro;  PMID:10675023,9719565,8805245,7542802,7542800;
     gi|17368309|sp|P71397|RNFC_HAEIN Electron transport complex pro;  PMID:7542800;
     gi|1574537|gb|AAC23331.1| conserved hypothetical protein;  PMID:7542800,8805245;
     gi|1075095|pir||E64136 rnfC protein homolog - Haemoph;  PMID:7542800;
311.          548          591          26          7.08          1.0e-04
     gi|15602250|ref|NP_245322.1| electron transport complex pro;  PMID:11248100;
     gi|12720632|gb|AAK02469.1| unknown [Pasteurella multocida;  PMID:11248100;
     gi|17368785|sp|Q9CNP2|RNFC_PASMU Electron transport complex pro;  PMID:11248100;
312.          548          591          20          7.08          2.0e-04
     gi|16122472|ref|NP_405785.1| electron transport complex pro;  PMID:11586360;
     gi|15980244|emb|CAC91050.1| putative iron-sulfur binding N;  PMID:11586360;
     gi|25330739|pir||AF0273 probable iron-sulfur binding N;  PMID:11586360;
313.          548          591          20          7.08          2.0e-04
     gi|22125975|ref|NP_669398.1| electron transport complex pro;  PMID:12142430;
     gi|21958919|gb|AAM85649.1| putative membrane protein [Yer;  PMID:12142430;
314.          548          591          28          7.08          1.0e-03
     gi|15831592|ref|NP_310365.1| electron transport complex pro;  PMID:11258796,11111050,11108008,10734605;
     gi|13361805|dbj|BAB35761.1| putative membrane protein [Esc;  PMID:10734605,11108008,11111050,11258796;
     gi|25330740|pir||B90921 probable membrane protein [imp;  PMID:11258796;
315.          548          591          28          7.08          1.0e-03
     gi|12515618|gb|AAG56618.1| putative membrane protein [Esc;  PMID:11206551;
     gi|17368144|sp|P58324|RNFC_ECO57 Electron transport complex pro;  PMID:11206551,11258796;
     gi|15802043|ref|NP_288065.1| electron transport complex pro;  PMID:11206551;
     gi|25330743|pir||F85769 probable membrane protein Z263;  PMID:11206551;
316.          548          591          28          7.08          1.0e-03
     gi|7451570|pir||G64919 probable iron-sulfur protein b;  PMID:9278503;
     gi|1787916|gb|AAC74701.1| fused predicted 4Fe-4S ferredo;  PMID:9278503;
     gi|1742696|dbj|BAA15391.1| Glucose repression mediator pr;  PMID:9097039;
     gi|17368316|sp|P77611|RNFC_ECOLI Electron transport complex pro;  PMID:9278503,9097039;
     gi|1742688|dbj|BAA15384.1| fused predicted 4Fe-4S ferredo;  PMID:;
     gi|89108471|ref|AP_002251.1| fused predicted 4Fe-4S ferredo;  PMID:16397293;
     gi|16129587|ref|NP_416146.1| electron transport complex pro;  PMID:9278503;
     gi|1742720|dbj|BAA15414.1| Glucose repression mediator pr;  PMID:9097039;
317.          545          591          19          7.58          1.0e-03
     gi|19704917|ref|NP_602412.1| Nitrogen fixation iron-sulphur;  PMID:11889109;
     gi|19712812|gb|AAL93711.1| Nitrogen fixation iron-sulphur;  PMID:11889109;
 
Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.
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