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   NP_812419.1;SP15308D
Protein Sequence Comparative Analysis   (PSCA)
 
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NP_812419.1    REFERENCE SYSTEM

Accession: NP_812419.1
Description: gi|29348916|ref|NP_812419.1| hypothetical protein BT3507 [Bacteroides thetaiotaomicron VPI-5482]
Organism: BACTEROIDES THETAIOTAOMICRON VPI-5482
Keyword: gi|29348916|ref|NP_812419.1| hypothetical protein BT3507 [Bacteroides thetaiotaomicron VPI-5482]

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:8.5e-15
    Pfam:PF08522   Domain of unknown function (DUF1735);  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          22          353          100          93.77          0.0e+00
     Pdb:4QNI CRYSTAL STRUCTURE OF AN AUXILIARY NUTRIENT BINDING PROTEIN (; PMID:;
2.          22          353          44          93.77          8.0e-66
     Pdb:3NQK CRYSTAL STRUCTURE OF A STRUCTURAL GENOMICS, UNKNOWN FUNCTION; PMID:;
     Pdb:3SOT CRYSTAL STRUCTURE OF A MULTIDOMAIN PROTEIN INCLUDING DUF1735; PMID:;
3.          23          350          36          92.63          2.0e-53
     Pdb:3P02 CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION (BACOVA_0; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          353          100          99.72          0.0e+00
     gi|29340822|gb|AAO78613.1| hypothetical protein BT_3507 [;  PMID:12663928;
     gi|29348916|ref|NP_812419.1| hypothetical protein BT3507 [B;  PMID:12663928;
2.          1          353          45          99.72          1.0e-79
     gi|29340811|gb|AAO78602.1| hypothetical protein BT_3496 [;  PMID:12663928;
     gi|29348905|ref|NP_812408.1| hypothetical protein BT3496 [B;  PMID:12663928;
3.          1          353          42          99.72          8.0e-77
     gi|29348894|ref|NP_812397.1| hypothetical protein BT3485 [B;  PMID:12663928;
     gi|29340800|gb|AAO78591.1| hypothetical protein BT_3485 [;  PMID:12663928;
4.          1          353          44          99.72          3.0e-73
     gi|29340788|gb|AAO78579.1| hypothetical protein BT_3473 [;  PMID:12663928;
     gi|29348882|ref|NP_812385.1| hypothetical protein BT3473 [B;  PMID:12663928;
5.          4          353          34          98.87          4.0e-50
     gi|29348704|ref|NP_812207.1| hypothetical protein BT3295 [B;  PMID:12663928;
     gi|29340609|gb|AAO78401.1| hypothetical protein BT_3295 [;  PMID:12663928;
6.          1          353          32          99.72          2.0e-41
     gi|29340659|gb|AAO78450.1| hypothetical protein BT_3344 [;  PMID:12663928;
     gi|29348753|ref|NP_812256.1| hypothetical protein BT3344 [B;  PMID:12663928;
7.          1          348          24          98.30          1.0e-09
     gi|29349198|ref|NP_812701.1| hypothetical protein BT3790 [B;  PMID:12663928;
     gi|29341106|gb|AAO78895.1| hypothetical protein BT_3790 [;  PMID:12663928;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

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