LOADING...
   BC011707;KN.B21268A.NRBF2
Protein Sequence Comparative Analysis   (PSCA)
 
  Back to Target List
 

BC011707    REFERENCE SYSTEM

Accession: BC011707
Description: BC011707 Homo sapiens nuclear receptor binding factor 2, mRNA (cDNA clone MGC:19778 IMAGE:3687848), complete cds, coding region:99-962
Organism: HOMO SAPIENS
Keyword: BC011707 Homo sapiens nuclear receptor binding factor 2, mRNA (cDNA clone MGC:19778 IMAGE:3687848), complete cds, coding region:99-962

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: ;  PMID:;
   GenBank: ;  PMID:;
Family annotation                  
1.          trusted          evalue:0.0e+00
    Pfam:PF08961   Domain of unknown function (DUF1875);  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          4          87          92          28.92          2.0e-38
     Pdb:2CRB SOLUTION STRUCTURE OF MIT DOMAIN FROM MOUSE NRBF-2 ; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          287          100          99.65          0.0e+00
2.          1          287          99          99.65          0.0e+00
3.          1          287          99          99.65          0.0e+00
4.          1          287          99          99.65          0.0e+00
5.          1          287          99          99.65          0.0e+00
6.          1          287          92          99.65          0.0e+00
7.          1          287          90          99.65          0.0e+00
8.          1          287          90          99.65          0.0e+00
9.          1          287          88          99.65          0.0e+00
10.          1          287          87          99.65          0.0e+00
11.          1          287          87          99.65          0.0e+00
12.          1          287          81          99.65          0.0e+00
13.          1          233          100          80.84          1.0e-129
14.          1          287          81          99.65          1.0e-126
15.          1          287          82          99.65          1.0e-124
16.          1          287          61          99.65          5.0e-93
17.          1          282          51          97.91          5.0e-63
18.          1          86          100          29.62          9.0e-41
19.          4          86          93          28.57          5.0e-37
20.          1          206          37          71.43          9.0e-25
21.          87          175          54          30.66          1.0e-14
     gi|21753324|dbj|BAC04324.1| unnamed protein product [Homo ;  PMID:;
22.          5          206          22          70.03          2.0e-09
     gi|72152412|ref|XP_793052.1| PREDICTED: similar to nuclear ;  PMID:;
23.          8          199          29          66.55          9.0e-09
24.          8          111          35          35.89          1.0e-08
25.          43          216          27          60.28          3.0e-04
     gi|39581964|emb|CAE73826.1| Hypothetical protein CBG21388 ;  PMID:;
26.          2          255          24          88.15          9.0e-04
     gi|68129234|emb|CAJ07774.1| hypothetical protein, conserve;  PMID:16020728;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

Contact Webmaster JCSG Menu