LOADING...
   13422365;PC07372D
Protein Sequence Comparative Analysis   (PSCA)
 
  Back to Target List
 

13422365    REFERENCE SYSTEM

Accession: 13422365
Description: Hypothetical protein CC1065.
Organism: Caulobacter crescentus.
Keyword: Complete proteome;Hypothetical protein;

  

References           
PMID Filter
     Deleting genome references          
     Reference classification      Trusted or extreme similarity       Gathering or high similarity       Noise or low similarity
 
Sequence reference                    
   SP-EMBL: Q9A9C4;  PMID:;
   GenBank: AAK23049;  PMID:;
Family annotation                  
1.          trusted          evalue:2.8e-52
    Pfam:PF07372   Protein of unknown function (DUF1491);  PMID:;
 
PDB similairty                    
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          109          100          99.08          2.0e-55
     Pdb:4GOQ CRYSTAL STRUCTURE OF A DUF1491 FAMILY PROTEIN (CC_1065) FROM; PMID:;
     Pdb:2N6E NMR STRUCTURE OF A DUF1491 FAMILY PROTEIN (CC_1065) FROM CAU; PMID:;
2.          1          95          34          86.24          1.0e-05
     Pdb:2KNR SOLUTION STRUCTURE OF PROTEIN ATU0922 FROM A. TUMEFACIENS. N; PMID:;
 
NR homologs                 
No.    Start    End    Identity%    Coverage%    Evalue
1.          1          109          100          99.08          3.0e-56
     gi|16125317|ref|NP_419881.1| hypothetical protein CC1065 [C;  PMID:;
     gi|13422365|gb|AAK23049.1| hypothetical protein [Caulobac;  PMID:;
2.          1          103          46          93.58          7.0e-16
     gi|89358559|ref|ZP_01196381.1| conserved hypothetical protein;  PMID:;
3.          3          109          43          97.25          2.0e-15
     gi|83945567|ref|ZP_00957913.1| hypothetical protein OA2633_14;  PMID:;
     gi|83850933|gb|EAP88792.1| hypothetical protein OA2633_14;  PMID:;
4.          3          106          44          94.50          7.0e-14
     gi|77386640|gb|ABA77825.1| conserved hypothetical protein;  PMID:;
     gi|77462222|ref|YP_351726.1| hypothetical protein RSP_1677 ;  PMID:;
5.          1          103          0          93.58          3.0e-13
     gi|77740514|ref|ZP_00809001.1| Protein of unknown function DU;  PMID:;
6.          1          103          42          93.58          2.0e-12
     gi|75676351|ref|YP_318772.1| Protein of unknown function DU;  PMID:;
     gi|74421221|gb|ABA05420.1| Protein of unknown function DU;  PMID:;
7.          3          108          41          96.33          2.0e-12
     gi|58002128|gb|AAW61022.1| Hypothetical protein GOX1261 [;  PMID:;
     gi|58039714|ref|YP_191678.1| hypothetical protein GOX1261 [;  PMID:;
8.          1          96          39          87.16          2.0e-12
     gi|82615576|emb|CAJ10559.1| conserved hypothetical protein;  PMID:;
     gi|17987638|ref|NP_540272.1| Hypothetical Cytosolic Protein;  PMID:;
     gi|82699475|ref|YP_414049.1| hypothetical protein BAB1_0603;  PMID:;
     gi|62289546|ref|YP_221339.1| hypothetical protein BruAb1_06;  PMID:;
     gi|17983349|gb|AAL52536.1| Hypothetical Cytosolic Protein;  PMID:;
     gi|62195678|gb|AAX73978.1| conserved hypothetical protein;  PMID:;
9.          1          96          39          87.16          2.0e-12
     gi|23347372|gb|AAN29510.1| conserved hypothetical protein;  PMID:;
     gi|23501468|ref|NP_697595.1| hypothetical protein BR0579 [B;  PMID:;
10.          1          103          0          93.58          2.0e-12
     gi|83367858|ref|ZP_00912725.1| conserved hypothetical protein;  PMID:;
11.          3          106          0          94.50          4.0e-12
     gi|78695618|ref|ZP_00860129.1| conserved hypothetical protein;  PMID:;
12.          3          106          43          94.50          5.0e-12
     gi|69935300|ref|ZP_00630280.1| conserved hypothetical protein;  PMID:;
13.          1          103          43          93.58          9.0e-12
     gi|27378185|ref|NP_769714.1| hypothetical protein blr3074 [;  PMID:;
     gi|27351332|dbj|BAC48339.1| blr3074 [Bradyrhizobium japoni;  PMID:;
14.          1          103          40          93.58          9.0e-12
     gi|90423289|ref|YP_531659.1| protein of unknown function DU;  PMID:;
     gi|90105303|gb|ABD87340.1| protein of unknown function DU;  PMID:;
15.          3          106          40          94.50          9.0e-12
     gi|89069070|ref|ZP_01156451.1| hypothetical protein OG2516_17;  PMID:;
     gi|89045439|gb|EAR51504.1| hypothetical protein OG2516_17;  PMID:;
16.          1          103          38          93.58          9.0e-12
     gi|85697579|gb|EAQ35456.1| hypothetical protein NB311A_18;  PMID:;
     gi|85715640|ref|ZP_01046620.1| hypothetical protein NB311A_18;  PMID:;
17.          1          103          40          93.58          1.0e-11
     gi|91976423|ref|YP_569082.1| protein of unknown function DU;  PMID:;
     gi|91682879|gb|ABE39181.1| protein of unknown function DU;  PMID:;
18.          3          103          39          91.74          1.0e-11
     gi|23006314|ref|ZP_00048689.1| COG0465: ATP-dependent Zn prot;  PMID:;
19.          3          105          41          93.58          2.0e-11
     gi|84683999|ref|ZP_01011901.1| hypothetical protein RB2654_16;  PMID:;
     gi|84667752|gb|EAQ14220.1| hypothetical protein RB2654_16;  PMID:;
20.          1          105          38          95.41          4.0e-11
     gi|84515165|ref|ZP_01002528.1| hypothetical protein SKA53_131;  PMID:;
     gi|84511324|gb|EAQ07778.1| hypothetical protein SKA53_131;  PMID:;
21.          1          106          41          96.33          6.0e-11
     gi|84500559|ref|ZP_00998808.1| hypothetical protein OB2597_11;  PMID:;
     gi|84391512|gb|EAQ03844.1| hypothetical protein OB2597_11;  PMID:;
22.          3          105          40          93.58          6.0e-11
     gi|83855025|ref|ZP_00948555.1| hypothetical protein NAS141_09;  PMID:;
     gi|83842868|gb|EAP82035.1| hypothetical protein NAS141_09;  PMID:;
23.          3          105          40          93.58          7.0e-11
     gi|83941548|ref|ZP_00954010.1| hypothetical protein EE36_0492;  PMID:;
     gi|83847368|gb|EAP85243.1| hypothetical protein EE36_0492;  PMID:;
24.          3          106          40          94.50          1.0e-10
     gi|85826603|gb|EAQ46799.1| hypothetical protein MED193_16;  PMID:;
     gi|86135729|ref|ZP_01054308.1| hypothetical protein MED193_16;  PMID:;
25.          1          103          40          93.58          6.0e-10
     gi|90337191|gb|EAS50896.1| hypothetical protein SI859A1_0;  PMID:;
     gi|90419111|ref|ZP_01227022.1| hypothetical protein SI859A1_0;  PMID:;
26.          3          106          39          94.50          6.0e-10
     gi|83951645|ref|ZP_00960377.1| hypothetical protein ISM_13820;  PMID:;
27.          3          106          37          94.50          6.0e-10
     gi|99038677|gb|ABF65289.1| protein of unknown function DU;  PMID:;
     gi|99082397|ref|YP_614551.1| protein of unknown function DU;  PMID:;
28.          3          96          0          85.32          3.0e-09
     gi|56698710|ref|YP_165945.1| hypothetical protein SPO0690 [;  PMID:;
     gi|56680447|gb|AAV97113.1| conserved hypothetical protein;  PMID:;
29.          3          107          38          95.41          5.0e-09
     gi|94496608|ref|ZP_01303184.1| hypothetical protein SKA58_179;  PMID:;
     gi|94423968|gb|EAT08993.1| hypothetical protein SKA58_179;  PMID:;
30.          3          105          37          93.58          5.0e-09
     gi|85705115|ref|ZP_01036215.1| hypothetical protein ROS217_04;  PMID:;
31.          3          103          33          91.74          9.0e-09
     gi|85375419|ref|YP_459481.1| hypothetical protein ELI_12960;  PMID:;
     gi|84788502|gb|ABC64684.1| hypothetical protein ELI_12960;  PMID:;
32.          1          95          0          86.24          8.0e-07
     gi|13476356|ref|NP_107926.1| hypothetical protein mlr7652 [;  PMID:;
     gi|14027117|dbj|BAB54071.1| mlr7652 [Mesorhizobium loti MA;  PMID:;
33.          1          95          36          86.24          1.0e-06
     gi|86280997|gb|ABC90060.1| hypothetical conserved protein;  PMID:;
     gi|86356895|ref|YP_468787.1| hypothetical protein RHE_CH012;  PMID:;
34.          9          105          0          88.07          1.0e-06
     gi|15888261|ref|NP_353942.1| hypothetical protein AGR_C_168;  PMID:;
     gi|15155919|gb|AAK86727.1| AGR_C_1681p [Agrobacterium tum;  PMID:;
35.          3          103          34          91.74          3.0e-06
     gi|85709817|ref|ZP_01040882.1| hypothetical protein NAP1_1306;  PMID:;
     gi|85688527|gb|EAQ28531.1| hypothetical protein NAP1_1306;  PMID:;
36.          1          95          32          86.24          4.0e-06
     gi|68189876|gb|EAN04538.1| similar to Uncharacterized con;  PMID:;
37.          3          97          29          86.24          2.0e-05
     gi|56542506|gb|AAV88660.1| conserved hypothetical protein;  PMID:;
     gi|56550932|ref|YP_161771.1| hypothetical protein ZMO0036 [;  PMID:15592456;
38.          9          97          34          80.73          5.0e-05
     gi|84703638|ref|ZP_01017466.1| hypothetical protein PB2503_08;  PMID:;
39.          7          98          34          83.49          4.0e-04
     gi|88941309|ref|ZP_01146729.1| conserved hypothetical protein;  PMID:;
 

Notes: The reference system provides subject-oriented search and sequence-oriented search for reference collection. The reference filter supports the classification and selection of references. You can use a group of buttons to select references based on your interest or the relative level of references that are justified base on some criteria, e.g. trusted or high similairties. By deafult, PSCA shows the references whose levels are better than gathering or high similarity of reference classification.

Contact Webmaster JCSG Menu