Protein Sequence Comparative Analysis   (PSCA)
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TM0828 PDB Fold Similairty

PDB sequences with significant alignments within target range (1 - 319). (Other protein annotations are based on the whole sequence)

Sequence information                                           Score	E-value
2AJR_A|pdb|JCSG975591|Sugar Kinase, Pfkb Family                   612	e-175
2F02_A|pdb|JCSG975099|Tagatose-6-Phosphate Kinase                 128	4e-30
2Q5R_A|pdb|JCSG1559095|Tagatose-6-phosphate kinase                119	2e-27
2JG5_A|pdb|JCSG1538943|FRUCTOSE 1-PHOSPHATE KINASE                119	2e-27
2JG1_A|pdb|JCSG1559094|TAGATOSE-6-PHOSPHATE KINASE                119	3e-27
2ABQ_A|pdb|JCSG493188|Fructose 1-Phosphate Kinase                 112	3e-25
3Q1Y_A|pdb|JCSG3192931|Lin2199 protein                            88	7e-18
3IE7_A|pdb|JCSG2997805|Lin2199 protein                            87	2e-17
3UQE_A|pdb|JCSG3257921|6-phosphofructokinase isozyme 2            71	1e-12
3CQD_B|pdb|JCSG109831|6-phosphofructokinase isozyme 2             70	1e-12

Except the additional notes, the protein annotation is based on the whole protein sequence, not only on the selected fragment of target sequence. In this page, only the PDB sequences whose alignments fall in or overlap with the target range are displayed.
Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages.

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