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YP_001050605.1;MI4130F |
Protein Sequence Comparative Analysis (PSCA) | |
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YP_001050605.1 PDB Fold Similairty PDB sequences with significant alignments Sequence information Score E-value JCSG3172905|pdb|3NWP_A|6-phosphogluconolactonase 457 e-129 JCSG3164764|pdb|3LWD_A|6-phosphogluconolactonase 169 1e-42 JCSG3162236|pdb|3LHI_A|Putative 6-phosphogluconolactonase 142 1e-34 JCSG3180077|pdb|3OC6_A|6-phosphogluconolactonase 94 5e-20 JCSG2998454|pdb|3ICO_C|6-phosphogluconolactonase 85 4e-17 JCSG3214298|pdb|3TX2_A|Probable 6-phosphogluconolactonase 82 3e-16 JCSG453509|pdb|1VL1_A|6-phosphogluconolactonase 77 6e-15 JCSG309845|pdb|1PBT_A|6-Phosphogluconolactonase 74 7e-14 JCSG1673918|pdb|3CH7_A|6-phosphogluconolactonase 64 9e-11 JCSG1677658|pdb|3CSS_A|6-phosphogluconolactonase 64 9e-11 JCSG2990685|pdb|3E7F_B|6-phosphogluconolactonase 62 3e-10 JCSG1533313|pdb|2J0E_A|6-PHOSPHOGLUCONOLACTONASE 62 3e-10 JCSG474254|pdb|1Y89_A|Devb Protein 57 1e-08 JCSG1675345|pdb|2RI0_A|Glucosamine-6-phosphate deaminase 45 3e-05 JCSG1675346|pdb|2RI1_A|Glucosamine-6-phosphate deaminase 45 3e-05PDB sequence alignments QUERY 1 MIKETVFKSFDTPSALEQQLASKIASQLQEAVDARGKA----S----LVVSGGSTPLKLF 52 JCSG3172905 2 MIKETVFKSFDTPSALEQQLASKIASQLQEAVDARGKA----S----LVVSGGSTPLKLF 53 JCSG3164764 13 ---------------LaERLADtVAQaLEadLakReRA----l----LVVSGGSTPkpFF 49 JCSG3162236 4 -----VWhEYENaAeaaQSLADaVADaLQgALDeKGgA----v----LAVSGGrSPIaFF 50 JCSG3180077 5 -MSDTVIErhadtAALvaaaGDRLVDaISSAIgeRGQA----T----IVLTGGGTgIgLL 55 JCSG2998454 29 ---------FpdsDiLvaaaGKRLVGaIgaAVaARGQA----l----IVLTGGGNgIaLL 71 JCSG3214298 5 -MSETIIEKYadtDALvtaaGDRLASaItgALaeRGKA----m----IVLTGGGTgIaLL 55 JCSG453509 29 -------------------VVEKIrTKMEKlLEeKdKi----f----VVLAGGrTPLpVY 61 JCSG309845 39 -------------------VVEKIrTKxEKlLEeKdKi----f----VVLAGGrTPLpVY 71 JCSG1673918 27 ------------------------------AIDARvdk----SvpvvLALSGGSTPkRLY 52 JCSG1677658 28 ------------------------------AIDARvdk----SvpvvLALSGGSTPkRLY 53 JCSG2990685 2 ------FKptiSvhAtpQELSAagCrKIvEiIEAsGSqqwplS----IALAGGSTPkmtY 51 JCSG1533313 3 ------FKptiSvhAtpQELSAagCrKIvEiIEAsGSqqwplS----IALAGGSTPkmtY 52 JCSG474254 5 -------KiFpTaDAVvKSLADdxlAysQQGqpVH------------IsLSGGSTPkxLF 45 JCSG1675345 14 ---------------------SKVAfRMlEeeiTfGak----T----LgLAtGSTPLELY 44 JCSG1675346 15 ---------------------SKVAfRMlEeeiTfGak----T----LgLAtGSTPLELY 45 QUERY 53 QLLS--MK----S--I---DW----SD-VYITLADERWVEADADASNERLVREHLLQN-- 94 JCSG3172905 54 QLLS--MK----S--I---DW----SD-VYITLADERWVEADADASNERLVREHLLQN-- 95 JCSG3164764 50 tsLA--aK----A--L---pW----Ar-VdVTLADERWVtADdadSNaRLVREtLLvG-- 91 JCSG3162236 51 NaLS--QK----D--L---DW----KN-VgITLADERiVpTNhadSNtgLVREYLLKN-- 92 JCSG3180077 56 KrVr--eR----SgeI---DW----Sk-VHIywGDERFVpqDdDerNDKqAREaLLDHig 101 JCSG2998454 72 RyLS--aQ----AqqI---EW----Sk-VHLfwGDERYVpeDdDerNlKqARRaLLNHvd 117 JCSG3214298 56 KhLrdvaS----G--L---DW----TN-VHVfwGDDRYVpktdperNawqAwEaLLEH-- 99 JCSG453509 62 EkLA--eQ----K--F---pW----Nr-IHFfLSDERYVplDSDqSNfRnINEvLF---- 101 JCSG309845 72 EkLA--eQ----K--F---pW----Nr-IHFfLSDERYVplDSDqSNfRnINEvLF---- 111 JCSG1673918 53 EeLh--eK----D--LallQq----ha-VqFiLGDERlLSeDdEqSNfsMAtKaLLRDvp 99 JCSG1677658 54 EeLh--eK----D--LallQq----ha-VqFiLGDERlLSeDdEqSNfsMAtKaLLRDvp 100 JCSG2990685 52 arLh--dE----h--L---Nllrekra-LrFfMGDERmVpADStdSNyNMAREvLLHD-- 97 JCSG1533313 53 arLh--dE----h--L---Nllrekra-LrFfMGDERmVpADStdSNyNMAREvLLHD-- 98 JCSG474254 46 KLLA--sQpyanD--I---QW----KN-LHFwwGDERcVapDdaeSNygeANalLFSK-- 91 JCSG1675345 45 KeIr--eS----h--L---DF----SDmVsINLdEyvgLSADdkqSyayFMKQNLFaa-- 87 JCSG1675346 46 KeIr--eS----h--L---DF----SDmVsINLdEyvgLSADdkqSyayFMKQNLFaa-- 88 QUERY 95 ---------RASNA----KF-R-GLKNM-FST-A---EAGA-DMAAE-S------L--S- 123 JCSG3172905 96 ---------RASNA----KF-R-GLKNM-FST-A---EAGA-DMAAE-S------L--S- 124 JCSG3164764 92 ---------pAAEA----cF-H-pLtTd-dDT-p---EAGV-EtVAE-r------L--E- 120 JCSG3162236 93 ---------KAAaA----vW-i-pMvEd-gKTeT---Elhp-DaVVDyA------L--K- 123 JCSG3180077 102 ippvnvhamaASDG----EF-g---dDL-eAA-A---aGyA-QLlSa-N------F--D- 137 JCSG2998454 118 ipsnqvhpmaASDG----dF-g-GdlDa-aAl-A---yeqV--LAAS-A------a--p- 154 JCSG3214298 100 -----------vNf----pL-R-NMhaMpnSe-S---EyGT-DLdAa-A------L--Ay 128 JCSG453509 102 -----------SRA----KIps-GnvHy-vDT-SlpiEkAC-EkyeR-E------I--r- 132 JCSG309845 112 -----------SRA----KIps-GnvHy-vDT-SlpiEkAC-EkyeR-E------I--r- 142 JCSG1673918 100 ssdvisidrRAAlA----ts-K-deKGg-LDg-A---wAvAqDyeVK-l------L--N- 138 JCSG1677658 101 ssdvisidrRAAlA----ts-K-deKGg-LDg-A---wAvAqDyeVK-l------L--N- 139 JCSG2990685 98 ---------ipDDl----vF-pfdtSaV-tpS-A---EAtS-adAmR-v------a--E- 127 JCSG1533313 99 ---------ipDDl----vF-pfdtSaV-tpS-A---EAtS-adAmR-v------a--E- 128 JCSG474254 92 ---------inXpAqnihRI-l-GeNEp-qAe-A---ErfA-QaXAH-v------IptE- 126 JCSG1675345 88 ---------Kp-------------FKKs-Ylp-n---glAA-DLAkE-TeyydqiL--A- 115 JCSG1675346 89 ---------Kp-------------FKKs-Ylp-n---glAA-DLAkE-TeyydqiL--A- 116 QUERY 124 ------------NFPRP-------------------FDVVVLGMGNDGHTCSWFPCS-AE 151 JCSG3172905 125 ------------NFPRP-------------------FDVVVLGMGNDGHTCSWFPCS-AE 152 JCSG3164764 121 ------------SLPwP-------------------aSAVILGMGGDGHTASlFPdS-eQ 148 JCSG3162236 124 ------------HYkQP--------------------DVLILGMGNDGHTASiFPkA-pQ 150 JCSG3180077 138 ------------Ssvpg-------------------FDVhLLGMGGEGHVnSlFP----D 162 JCSG2998454 155 ------------GdPaPn------------------FDVhLLGMGpEGHinSlFPhSpAv 184 JCSG3214298 129 eqllaanaepgqDcP-a-------------------FDVhLLGMGGEGHinSlFPhT-da 167 JCSG453509 133 ------------Satdq-------------------FDLAILGMGpDGHVASiFdlE-Tg 160 JCSG309845 143 ------------Satdq-------------------FDLAILGxGpDGHVASiFdlE-Tg 170 JCSG1673918 139 ------------cLPckqingtaksvpv--------vDIVLLGFGSDGHTASiFPdS-V- 176 JCSG1677658 140 ------------cLPckqingtaksvpv--------vDIVLLGFGSDGHTASiFPdS-V- 177 JCSG2990685 128 ------------aYgKqlasllplksvgeagpkvpvFDVVLLGLGSDGHTASiFPgSqAE 175 JCSG1533313 129 ------------aYgKqlasllplksvgeagpkvpvFDVVLLGLGSDGHTASiFPgSqAE 176 JCSG474254 127 ------------Ngtpv-------------------FDwILLGVGaDGHTASlFPgQ-TD 154 JCSG1675345 116 ------------QY--P-------------------IDLqILGIGRNAHi-----gf-nE 136 JCSG1675346 117 ------------QY--P-------------------IDLqILGIGRNAHi-----gf-nE 137 QUERY 152 LENALTTQA--LCVAT---NPT-T-------------APH-GRITLSKSA--ILNSRQIY 189 JCSG3172905 153 LENALTTQA--LCVAT---NPT-T-------------APH-GRITLSKSA--ILNSRQIY 190 JCSG3164764 149 LaTALeTtS--aAVVV---Hap-S-------------VPQ-ARITLSaSr--LaDAglhv 186 JCSG3162236 151 FQTAIdgSAgvalVhT---TPV-T-------------APH-eRISMTlDA--IaHTgHVF 190 JCSG3180077 163 tDaVreTEr--LvVGV---SdSpk-------------pPp-rRITLTlpA--VqNSREVW 201 JCSG2998454 185 LES--TrMV--VAVdd---SPk-p-------------pPR--RITLTlpA--IqRSREVW 219 JCSG3214298 168 VKE---TQr--LvVAVp--Dsp-k-------------pPp-qRITLTlpA--IqRSREVW 203 JCSG453509 161 nKDnLVT-------fT---DPS-g-------------dPkvpRVTLTfrA--LnTSlyVl 194 JCSG309845 171 nKDnLVT-------fT---DPS-g-------------dPkvpRVTLTfrA--LnTSlyVl 204 JCSG1673918 177 ---AaTdEe--hvVSVsfpSPT-m-------------SPkvwRVTLSKTV--IqyAKHVv 215 JCSG1677658 178 ---AaTdEe--hvVSVsfpSPT-m-------------SPkvwRVTLSKTV--IqyAKHVv 216 JCSG2990685 176 kETdgkVvV--svgfp---SeT-m-------------kPkvwRVTLSpAT--IMQARNVi 214 JCSG1533313 177 kETdgkVvV--svgfp---SeT-m-------------kPkvwRVTLSpAT--IMQARNVi 215 JCSG474254 155 yaDA---Nl--svVAS---HPe-S-----------------GQLrVSKTAkvLqaAKRIs 188 JCSG1675345 137 pgTAFSSQT--hlVdl---TPS-TiaansrffekaedVPk-qaISMGlAS--IMSAKMIl 187 JCSG1675346 138 pgTAFSSQT--hlVdl---TPS-TiaansrffekaedVPk-qaISMGlAS--IMSAKMIl 188 QUERY 190 LHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRKTPVDVFWSA 232 JCSG3172905 191 LHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRKTPVDVFWSA 233 JCSG3164764 187 LHITGNDKrrVlaEALaGDDVRqLPIRAfLSQ---PIaTYWA- 225 JCSG3162236 191 LaIqGEEKkAVFdQAaQGEN-ReyPIslVLnHQgVnchVFYA- 231 JCSG3180077 202 LvVsGEaKaDAvaaAVgGaDpvdIPaaGAVGRERT-------- 236 JCSG2998454 220 LlVsGpgKaDAvaaAIgGaDpvSVPaaGAVGRQNT-------- 254 JCSG3214298 204 LvVsGEaKaDAvaaAVgGaDpvdVP------------------ 228 JCSG453509 195 FlIrGKEKINrltEiLKDtpLpAyfVR---------------- 221 JCSG309845 205 FlIrGKEKINrltEiLKDtpLpAyfVR---------------- 231 JCSG1673918 216 VlaAGKDKnwVvRgVLSESpTdpLPVsrfL------------- 245 JCSG1677658 217 VlaAGKDKnwVvRgVLSESpTdpLPVsrfL------------- 246 JCSG2990685 215 VlaTGaEKkwVv-DGIlADtAHkaPVarfL------------- 243 JCSG1533313 216 VlaTGaEKkwVv-DGIlADtAHkaPVarfL------------- 244 JCSG474254 189 ylVLGagKaEIvEQ----------------------------- 202 JCSG1675345 188 LmafGEEK----------------------------------- 195 JCSG1675346 189 LmafGEEK----------------------------------- 196 Note Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages. |
