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   TM0231;TM0231
Protein Sequence Comparative Analysis   (PSCA)
 
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TM0231    PDB Fold Similairty





PDB sequences with significant alignments
Sequence information                                           Score	E-value
JCSG277479|pdb|1J6U_A|Udp-N-Acetylmuramate-Alanine Ligase ...     891	0.0
JCSG122505|pdb|1GQY_B|UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE       216	3e-56
JCSG3258057|pdb|4HV4_A|UDP-N-acetylmuramate--L-alanine ligase     191	1e-48
JCSG108245|pdb|2F00_B|UDP-N-acetylmuramate--L-alanine ligase      190	1e-48
JCSG3281890|pdb|4BUB_B|UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUT...    92	9e-19
JCSG213943|pdb|1EEH_A|UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLU...     81	2e-15
JCSG3184481|pdb|2X5O_A|UDP-N-ACETYLMURAMOYLALANINE--D-GLUTA...    81	2e-15
JCSG1563062|pdb|2JFG_A|UDP-N-ACETYLMURAMOYLALANINE--D-GLUTA...    81	2e-15
JCSG2995834|pdb|3HN7_A|UDP-N-acetylmuramate-L-alanine ligase      78	1e-14
JCSG644183|pdb|3LK7_A|UDP-N-acetylmuramoylalanine--D-gluta...     74	2e-13
JCSG2877817|pdb|3EAG_A|UDP-N-acetylmuramate:L-alanyl-gamma-...    64	2e-10
JCSG3281891|pdb|4BUC_A|UDP-N-ACETYLMURAMOYLALANINE--D-GLUTA...    57	2e-08
JCSG3304794|pdb|4QDI_A|UDP-N-acetylmuramoyl-tripeptide--D-a...    54	3e-07
JCSG2296094|pdb|2WTZ_B|UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUT...    50	3e-06
JCSG3285821|pdb|4C12_A|UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUT...    50	3e-06
JCSG220915|pdb|1E8C_A|Udp-N-Acetylmuramoylalanyl-D-Glutama...     44	3e-04
PDB sequence alignments
QUERY       1   MKIHFVGIGGIGMSAVA--LHEFSNGNDVYGSNIE-E-TERTAYLRKLGIPIFVPHSA-- 54
JCSG277479  14  -KIHFVGIGGIGxSAVA--LHEFSNGNDVYGSNIE-E-TERTAYLRKLGIPIFVPHSA-- 66
JCSG122505  20  -QIHFIGIGGaGMSGIA--eilLNEGyQIsGSDIa-D-gvvTqrLaQaGakIYIgHAe-- 72
JCSG3258057 25  --IHFVGIGGaGMGGIA--evlaNEGyQIsGSDLa-p-NSvTqHLtaLGaqIYfhHrp-- 76
JCSG108245  22  --IHFVGIGGaGMGGIA--evlaNEGyQIsGSDLa-p-NpvTqqLmNLGatIYfnHrp-- 73
JCSG3281890     ------------------------------------------------------------
JCSG213943  0   ------------------------------------------------------------
JCSG3184481 0   ------------------------------------------------------------
JCSG1563062 0   ------------------------------------------------------------
JCSG2995834 20  MhIHILGIcGtfMGSLA--LlarAlGHtVtGSDaNiy-ppmSTqLEQaGVtIeegYli-- 74
JCSG644183  40  ------------------------------GKpFD-E-NptAqsLlEeGIkVvcgshp-- 65
JCSG2877817 7   --IHIIGIGGtfMGGLA--aiakEaGfEVsGcDaK-myppmSTqLEaLGIdVYegfDAaq 61
JCSG3281891 21  MKIgFLGFGksNrSlLkylLNHqEakffVseAKtl-D-gEtkkFLEEhSVeyeegghT-- 76
JCSG3304794     ------------------------------------------------------------
JCSG2296094     ------------------------------------------------------------
JCSG3285821     ------------------------------------------------------------
JCSG220915      ------------------------------------------------------------

QUERY       55  -DNWY-D-PDL--VIKTPAVRDDNPEIVRARMER-VPI--ENRLHY-----FRDTLKREK 101
JCSG277479  67  -DNWY-D-PDL--VIKTPAVRDDNPEIVRARxER-VPI--ENRLHY-----FRDTLKREK 113
JCSG122505  73  -EHie-g-aSV--VVvSsAIKDDNPELVtSKQKR-IPV--iQRaQm-----LaEiMR--f 117
JCSG3258057 77  -ENvl-D-aSV--VVvStAIsaDNPEIVaAReaR-IPV--iRRaEm-----LaElMR--y 121
JCSG108245  74  -ENvr-D-aSV--VVvSsAIsaDNPEIVaAHeaR-IPV--iRRaEm-----LaElMR--f 118
JCSG3281890     ------------------------------------------------------------
JCSG213943  59  -DEWlma-aDL--IVaSPGIalaHPSLsaAadag-IeI--vGdIEl-----F---cREaQ 103
JCSG3184481 59  -DEWlma-aDL--IVaSPGIalaHPSLsaAadag-IeI--vGdIEl-----F---cREaQ 103
JCSG1563062 60  -DEWlma-aDL--IVaSPGIalaHPSLsaAadag-IeI--vGdIEl-----F---cREaQ 104
JCSG2995834 75  -aHlq-paPDL--VVvgnAMKrgmdvI------E-ymL--DTgLRYtsgpqFlSeqvlQS 121
JCSG644183  66  -lEll-D-eDFcyMIKNPGIpyNNPmVkKAleKQ-IPVltEvELaY-----LvS-----E 111
JCSG2877817 62  lDEFk-a-dvy--VIgNvAkR--GmDVVEAiLNlgLPy--iSgpQW-----LsENVlHHh 108
JCSG3281891 77  -EKll-D-cDV--VyvSPGIKpDTsmIellssRg-VkL--STELQF-----FlDNV--Dp 121
JCSG3304794     ------------------------------------------------------------
JCSG2296094 144 ----------------------------------------------------------ER 145
JCSG3285821     ------------------------------------------------------------
JCSG220915      ------------------------------------------------------------

QUERY       102 KEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVF------LGG-----I------------ 138
JCSG277479  114 KEEFAVTGTDGKTTTTAxVAHVLKHLRKSPTVF------LGG-----I------------ 150
JCSG122505  118 RHgIAVAGThGKTTTTAMISmIytQaKlDPTfv------nGG-----L------------ 154
JCSG3258057 122 RHgIAVAGThGKTTTTAMLSsIyaEaglDPTfv------nGG-----L------------ 158
JCSG108245  119 RHgIAIAGThGKTTTTAMVSsIyaEaglDPTfv------nGG-----L------------ 155
JCSG3281890 106 ---FGVTGTNGKTTTTmMIyHMLtsLgErgSVL------ttA-----V------------ 139
JCSG213943  104 apivAITGSNGKSTVTTLVGEMaK--aaGvNVg------VGG-----n------------ 138
JCSG3184481 104 apivAITGSNGKSTVTTLVGEMaK--aaGvNVg------VGG-----n------------ 138
JCSG1563062 105 apivAITGSNGKSTVTTLVGEMaK--aaGvNVg------VGG-----n------------ 139
JCSG2995834 122 RHvIAVAGThGKTTTTTMLAwILhYagiDagfL------IGG-----Vplvnttdtnl-- 168
JCSG644183  112 SQlIGITGSNGKTTTTTMIAEVL-NaggQrgLL------aGN-----Ig----------- 148
JCSG2877817 109 wv-LGVAGThGKTTTASMLAwVLEYaglAPgfL------IGG-----V------------ 144
JCSG3281891 122 KKvvGITGTDGKSTATALMyHVLS--gRGfkTF------LGGnfgtpa------------ 161
JCSG3304794 124 ----ALTGSSGKTTTkeMLGsILSRL--APTLI------trG-----n------------ 154
JCSG2296094 146 ltvIGITGTSGKTTTTyLVeagLRaagRvagLIgtigirVGG-----adlpsalttpeap 200
JCSG3285821 106 ---FGVTGTNGKTSiATMIhlIqRkLQKN-SAY------LGt-----n------------ 138
JCSG220915      ------------------------------------------------------------

QUERY       139 -MDS------LEHGNY---EKGN-------GP----VVYELDE---------SE-E---- 163
JCSG277479  151 -xDS------LEHGNY---EKGN-------GP----VVYELDE---------SE-E---- 175
JCSG122505  155 -VkS------agkNaH---lgAS-------ry----LIaEaDE---------SD-a---- 179
JCSG3258057 159 -VkA------agthar---lgSS-------ry----LIaEaDE---------SD-a---- 183
JCSG108245  156 -VkAagvharLgHGRY--------------------LIaEaDE---------SD-a---- 180
JCSG3281890 140 -kri------LgNSyY---DdiT-------tPdaitILsaMkE---------NR-Egggk 172
JCSG213943  139 -Igl------palmll---Ddec-------el----yVlELSS---------fQlE---- 164
JCSG3184481 139 -Igl------palmll---Ddec-------el----yVlELSS---------fQlE---- 164
JCSG1563062 140 -Igl------palmll---Ddec-------el----yVlELSS---------fQlE---- 165
JCSG2995834 169 -QQv------FaHSSYlgtEKdDsdnsvntGy----fViEaDE---------yD-S---- 203
JCSG644183  149 -FpA------sEvvQa---aNdK-------dt----LVmELSS---------fQ-l---- 173
JCSG2877817 145 -pENfgvsarLpQtpr---QdpN-------Sq----spFfViE---------AD-E---- 175
JCSG3281891 162 -VEA------LE-GEY---Dy---------------yVlEMSS---------fQ-l---- 181
JCSG3304794 155 -LNNdlgvp-MmllEl---RKeH-------qy----AVmELga---------NH-Q---- 184
JCSG2296094 201 tLQA------MlaAmv---ERGv-------dt----VVmEVSS---------ha-l---- 226
JCSG3285821 139 -gfQ------INEtKt---KgANt------tP----eTvSLtKkikeavdagAE-S---- 173
JCSG220915      ------------------------------------------------------------

QUERY       164 -F----------FSE-------FS-----PNYL-------------II---TNARG---- 180
JCSG277479  176 -F----------FSE-------FS-----PNYL-------------II---TNARG---- 192
JCSG122505  180 -s----------FlH-------LQ-----Pmvs-------------VV---TNmEp---- 196
JCSG3258057 184 -s----------FlH-------LQ-----Pmva-------------IV---TNiEA---- 200
JCSG108245  181 -s----------FlH-------LQ-----Pmva-------------IV---TNiEA---- 197
JCSG3281890 173 fF----------alE-------vS-----sHaLvqqrvegvrfdvgIF---TNisr---- 203
JCSG213943  165 -t----------tSS-------LQ-----avaa-------------tI---lNVte---- 181
JCSG3184481 165 -t----------tSS-------LQ-----avaa-------------tI---lNVte---- 181
JCSG1563062 166 -t----------tSS-------LQ-----avaa-------------tI---lNVte---- 182
JCSG2995834 204 -a----------FfDkrskfvhYr-----PRta-------------IL---NNlEf---- 227
JCSG644183  174 -Mg---------vKE-------Fr-----PHia-------------VI---TNlmp---- 191
JCSG2877817 176 -YdtaffdkrskFvH-------Yr-----PRta-------------VL---NNlEf---- 202
JCSG3281891 182 -F----------WSErp-----Yl-----sNFL-------------VL----Nise---- 199
JCSG3304794 185 -g----------eiD-------YTskivqPHva-------------gI---lNigt---- 206
JCSG2296094 227 -a----------LGR-------vD-----gTrF-------------aVgafTNlsr---- 246
JCSG3285821 174 -M----------tlE-------vS-----sHgL-------------VL---gRlRGvefd 194
JCSG220915      ------------------------------------------------------------

QUERY       181 ---------DHL------ENY---G--NS---LTRYRSAFEK---ISR---NT---DL-- 206
JCSG277479  193 ---------DHL------ENY---G--NS---LTRYRSAFEK---ISR---NT---DL-- 218
JCSG122505  197 ---------DHM------DTY---e--GD---FeKmKATYvK---FlH---NlpfygL-- 225
JCSG3258057 201 ---------DHM------DTY---q--GD---FeNlKQTFiN---FlH---Nl---pFyg 228
JCSG108245  198 ---------DHM------DTY---q--GD---FeNlKQTFiN---FlH---Nl---pFyg 225
JCSG3281890 204 ---------DHL------DfH---G--Tf---eNylKAkLHl---FDl---lk---Dd-- 229
JCSG213943  182 ---------DHM------DRY---p--fG---LqQYRAAklR---IyE---NA---kV-- 207
JCSG3184481 182 ---------DHM------DRY---p--fG---LqQYRAAklR---IyE---NA---kV-- 207
JCSG1563062 183 ---------DHM------DRY---p--fG---LqQYRAAklR---IyE---NA---kV-- 208
JCSG2995834 228 ---------DHa------DiF---A--DldaiqTQFHhmvRm---Ips---Tg---kI-- 256
JCSG644183  192 ---------tHL------DyH---G---S---FedYvAAkwN---IQNqmsSS---DF-- 219
JCSG2877817 203 ---------DHa------DiFadlG--ai---qTQFHylvRt---Vps---Eg---lI-- 231
JCSG3281891 200 ---------DHL------D-W---h--SS---FkEYvDSklKpafLQt---Eg---DL-- 227
JCSG3304794 207 ---------aHL------gEF---GgrDG---IcRaKSeIyR---hil---pq---gV-- 234
JCSG2296094 247 ---------DHL------DfH---p--Sm---adyFEAkaSl---FDp---DS---aL-- 272
JCSG3285821 195 vaifsnltqDHLdfhgtmEaY---G--HA---kSllfSqLgE---dls---Ke---ky-- 235
JCSG220915      ------------------------------------------------------------

QUERY       207 -VVTFA----ED----EL----------TSHL--G----D-------VTFGV-KKGT-YT 232
JCSG277479  219 -VVTFA----ED----EL----------TSHL--G----D-------VTFGV-KKGT-YT 244
JCSG122505  226 -AVmcA----DDpvlmEL----------VpkV--G----rqv-----ITYGfsEQAd-Yr 258
JCSG3258057 229 rAVmci----DDpvvrEL----------lpRV--G----rhi-----TTYGf-SddA--- 259
JCSG108245  226 rAVmcV----DD----pV----------irEL--l----p--------rvGr-QttT-Yg 251
JCSG3281890 230 -gVAvl----NE----SL----------ADaF--Nrksrk-------ITFGT-SKNAdYr 260
JCSG213943  208 -cVVnA----DD----aL----------TmpI--r----gaderc--VSFGV-NmGd-Yh 238
JCSG3184481 208 -cVVnA----DD----aL----------TmpI--r----gaderc--VSFGV-NmGd-Yh 238
JCSG1563062 209 -cVVnA----DD----aL----------TmpI--r----gaderc--VSFGV-NmGd-Yh 239
JCSG2995834 257 -IMpaAtislED----tLakgvwtpiwrTSvI--d----S-------TisSV-RRed-sp 296
JCSG644183  220 -LVlnf----NQ----gI----------SKEL--A----k-------TTkAT-ivpf-sT 245
JCSG2877817 232 -VcNgr----QQ----SL----------qDtLdkG----c-------wTpve-KfGT-eh 259
JCSG3281891 228 -fVynk----Hi----Er----------lrNL--e---------------GV-RSrk-ip 249
JCSG3304794 235 -AIVpq----QD----DF----------TAEI--r----EaakshqiMSFGe-ggdV-FA 267
JCSG2296094 273 -rArtA----vv----cI----------dDda--G----r-------AmaAr-aadA-iT 298
JCSG3285821 236 -VVlnn----DD----SF----------SEYL--r----t-------VT----------p 253
JCSG220915      ------------------------------------------------------------

QUERY       233 LEMRSAS---RAE--QKAM----VEKNG--------KRYLE--------------LK--- 258
JCSG277479  245 LExRSAS---RAE--QKAx----VEKNG--------KRYLE--------------LK--- 270
JCSG122505  259 IEdyEqT---gfQ--ghyt----VicpN--------NErIN--------------Vl--- 284
JCSG3258057 260 -DVQiAS---yrQ--EgpQghftLRRQd--------KplIE--------------Vt--- 288
JCSG108245  252 FSedAdv---RVE--DyqQ----IgpQGhftllrqdKEpMR--------------Vt--- 285
JCSG3281890 261 LgniEVS---w-E--gtqF----VlETp--------dglLK--------------Vf--- 285
JCSG213943  239 L-----N---HqQ--gETw----LRvKG--------EKvLN--------------VKe-- 260
JCSG3184481 239 L-----N---HqQ--gETw----LRvKG--------EKvLN--------------VKe-- 260
JCSG1563062 240 L-----N---HqQ--gETw----LRvKG--------EKvLN--------------VKe-- 261
JCSG2995834 297 LEnsQAE---NSSdwQaeL----ISaDG--------SQFtvsfndnkeatal---VN--- 335
JCSG644183  246 tEkvDGA---yVQ--DKqL----fyKGe--------Nimsv--------------dd--- 271
JCSG2877817 260 gwQaGeA---NAD--gSfd----VllDG--------KtagR--------------VK--- 285
JCSG3281891 250 FwtdEnf---aTE--KElI----V--RG--------KKY--------------------- 269
JCSG3304794 268 tEIEllp---QSa--NfqL----htpQG--------SsFV----------------R--- 291
JCSG2296094 299 VSaaDrpahwRAt--DvAp----TDaGG--------QQFta--------------Idpag 330
JCSG3285821 254 yEVfSyG---idE--EaqF----MaKNi--------QEsLQgvsfdfvtpfgtypVK--- 293
JCSG220915  297 ----------------------------------------E--------------IE--- 299

QUERY       259 ------LKVPG---FHNVLNALAVIALFDSLGYDLAPVLEALEEFRGV-HRRFSI--AFH 306
JCSG277479  271 ------LKVPG---FHNVLNALAVIALFDSLGYDLAPVLEALEEFRGV-HRRFSI--AFH 318
JCSG122505  285 ------LNVPG---kHNALNAtAALAVakEeGianeaILEALaDFQGA-gRRFDqlgeFi 334
JCSG3258057 289 ------LNAPG---rHNALNAaAAVAVatEeGiEdedILRALvgFQGT-gRRFDF--lgN 336
JCSG108245  286 ------LNAPG---rHNALNAaAAVAVatEeGiDdeaILRALESFQGT-gRRFDF--lgE 333
JCSG3281890 286 ------tRAiG---dfNAyNAaAAIAaLhQLGYDpkdLaSSLEtFtGV-EgRFEV--Vrg 333
JCSG213943  261 ------MKLsG---qHNytNALAALALaDAaGlprAssLKALttFtGL-pHRFEV----- 305
JCSG3184481 261 ------MKLsG---qHNytNALAALALaDAaGlprAssLKALttFtGL-pHRFEV----- 305
JCSG1563062 262 ------MKLsG---qHNytNALAALALaDAaGlprAssLKALttFtGL-pHRFEV----- 306
JCSG2995834 336 ------wSMsG---LHNVnNALVAIAaayNIGvSVktAcaALSaFaGI-kRRMEL--i-- 381
JCSG644183  272 ------IgVPG---sHNVeNALATIAVaklaGiSnqvIrETLSNFgGVkHRlqSL--G-- 318
JCSG2877817 286 ------wdLmG---rHNrMNALAVIAaarhVGvDIqtAcEALgaFKNV-kR--------- 326
JCSG3281891 270 -------tLPGnypYQmreNiLAVsVLYmEMfnELesfLElLRDFKpL-pHR-------- 313
JCSG3304794 292 ------LpfaG---eHNVqNAtAAVAFalALGvSLedIVKGLEQaQGA-kgRLN----Fi 337
JCSG2296094 331 vghhigIRLPG---rYNVaNCLVALAILDTVGvSpeqAVpGLREIRvp-gRleQI----- 381
JCSG3285821 294 ------spyvG---kfNIsNiMAAMiavwSkGtSLetIIKAVENLEpV-EgRLEV--l-- 339
JCSG220915  300 ------shLxG---afNVsNlLlALAtLlALGYpLAdLLKTaaRLQpV-cgRxEV---Ft 346

QUERY       307 DP-------ETNIYVIDDYAHTPDEIRNLLQTAKEV--FENEKIVVIFQPHRYS-RLERE 356
JCSG277479  319 DP-------ETNIYVIDDYAHTPDEIRNLLQTAKEV--FENEKIVVIFQPHRYS-RLERE 368
JCSG122505  335 rP-------NgKVrLVDDYGHhPtEVgvtIKAAREg--WgDKRIVMIFQPHRYS-RtRdl 384
JCSG3258057 337 fPlapvngkEgSamLVDDYGHhPtEVdatIKAARag--WpDKRIVMLFQPHRYT-RtRdl 393
JCSG108245  334 fPlepvngkSgTamLVDDYGHhPtEVdatIKAARag--WpDKNLVMLFQPHRFT-RtRdl 390
JCSG3281890 334 ak-------KiGLnVVvDFAHSPDaLEKLLKNVRKI--sQG-RVIVVFgaggnS-drgKR 382
JCSG213943  304 ------------------------------------------------------------ 305
JCSG3184481 304 ------------------------------------------------------------ 305
JCSG1563062 305 ------------------------------------------------------------ 306
JCSG2995834 382 gd-------vNDIlVFDDFAHhPtaItTtLDgAKKk--LaDRRLwAIIEPRsnTmKMgiH 432
JCSG644183  319 -----------KVHgISfY--NdSKstNILaTqKaLsgFDNtKVILI------------- 352
JCSG2877817 325 ------------------------------------------------------------ 326
JCSG3281891 312 ------------------------------------------------------------ 313
JCSG3304794 338 Qk-------apHLFIdDtYnaNPtSMRaaaQ----------------------------- 361
JCSG2296094 382 Dr-------gqGFlALvDYAHkPEaLRSVLtTl--A--hpDRRLAVVFg----A-ggDRD 425
JCSG3285821 340 DP-------SlpIdLIiDYAHTaDgMNKLID-AvQp--FvKQKLIfL------------- 376
JCSG220915  347 aP-------gkptvVVD-YAHTPDaLEKaLQAAR-------------------------- 372

QUERY       357 DGNFAK----ALQLADEVVVTEVYDAFEEKKNGISGKMIWDSLKSLGK-EAYFV----EK 407
JCSG277479  369 DGNFAK----ALQLADEVVVTEVYDAFEEKKNGISGKxIWDSLKSLGK-EAYFV----EK 419
JCSG122505  385 fdDFVQ----VLSqVDaLIMlDVYaAgEapivGaDSKsLcrSIRNLGKvDpiLV----Sd 436
JCSG3258057 394 ydDFAN----VLSqVDvLLMlDVYaAgEppipGaDSRaLcrTIRNrGK-ldpILvpdsES 448
JCSG108245  391 ydDFAN----VLtqVDtLLMlEVYpAgEapipGaDSRsLcrTIRGrGKiDpiLV----pd 442
JCSG3281890 383 pmmsev----AsKLADvVILTt-----DDpRGedpeQIMeDlIKGIdK-RkpYL----vl 428
JCSG213943  304 ------------------------------------------------------------ 305
JCSG3184481 304 ------------------------------------------------------------ 305
JCSG1563062 305 ------------------------------------------------------------ 306
JCSG2995834 433 QdSLAQ----SatLADHTL----------------------------------------- 447
JCSG644183  351 ------------------------------------------------------------ 352
JCSG2877817 325 ------------------------------------------------------------ 326
JCSG3281891 312 ------------------------------------------------------------ 313
JCSG3304794 360 ------------------------------------------------------------ 361
JCSG2296094 426 pGKrApmgriAaQLADlVVVTD-------------------------------------- 447
JCSG3285821 375 ------------------------------------------------------------ 376
JCSG220915  371 ------------------------------------------------------------ 372

QUERY       408 LPELEKVIS--VSENTVFLFVGAGDIIYSSRRFVERYQSSKSSPSRVLGSNK 457
JCSG277479  420 LPELEKVIS--VSENTVFLFVGAGDIIYSSRRFVERYQSSKSSPSRVLGSNK 469
JCSG122505  437 tsQLgdVLDqiIQDGdLILaqGAGSVskiSRgLAEsWKN------------- 475
JCSG3258057 449 aPEMlaqIl--nGEDlI-LvqGAGNIgkiARKLAE----------------- 480
JCSG108245  443 paRVaEMLApvLTgNdLILvqGAGNIgkiARsLAE----------------- 477
JCSG3281890 429 FdRrEaI-------ETALtIANrGDsVviAgRghERYQ-------------- 459
JCSG213943  304 ---------------------------------------------------- 305
JCSG3184481 304 ---------------------------------------------------- 305
JCSG1563062 305 ---------------------------------------------------- 306
JCSG2995834 446 ---------------------------------------------------- 447
JCSG644183  351 ---------------------------------------------------- 352
JCSG2877817 325 ---------------------------------------------------- 326
JCSG3281891 312 ---------------------------------------------------- 313
JCSG3304794 360 ---------------------------------------------------- 361
JCSG2296094 446 ---------------------------------------------------- 447
JCSG3285821 375 ---------------------------------------------------- 376
JCSG220915  371 ---------------------------------------------------- 372

Note
Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages.



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