||Protein Sequence Comparative Analysis (PSCA)|
|YP_001337146.1 PDB Fold Similairty|
PDB sequences with significant alignments
Sequence information Score E-value JCSG3303883|pdb|4XVV_A|Acid stress chaperone HdeB 163 2e-41 JCSG3211705|pdb|2XUV_B|HDEB 74 2e-14PDB sequence alignments
QUERY 26 VEETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYVDWHEVETVSVPKMLQECH 85 JCSG3303883 2 VEETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYVDWHEVETVSVPKMLQECH 61 JCSG3211705 6 ------KDMTCQEFIDLNPKAMTPVAWWMLHEETvYKGGDtVtlNETDlTQIPKVIEyCk 59 QUERY 86 KNPAAKLGDLSAVIKK 101 JCSG3303883 62 KNPAAKLGDLSAVIKK 77 JCSG3211705 60 KNPqkNL--------- 66
Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages.