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   NP_370957.1;SP17980D
Protein Sequence Comparative Analysis   (PSCA)
 
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NP_370957.1    PDB Fold Similairty





PDB sequences with significant alignments
Sequence information                                           Score	E-value
JCSG3184579|pdb|3O13_A|Superantigen-like protein                  392	e-110
JCSG1668076|pdb|2RDG_A|Superantigen-like protein 11               293	5e-80
JCSG1666960|pdb|2R61_A|Exotoxin 3                                 162	2e-40
JCSG277013|pdb|1M4V_B|SET3, superantigen-like protein             162	2e-40
JCSG1666975|pdb|2Z8L_A|Exotoxin 3                                 162	2e-40
JCSG3154774|pdb|3KLS_X|Exotoxin 1                                 142	2e-34
JCSG3302485|pdb|4O1N_A|Superantigen-like protein                  138	3e-33
JCSG3300529|pdb|4RH6_B|Exotoxin 3, putative                       137	6e-33
JCSG3199786|pdb|3R2I_A|Exotoxin 5                                 133	8e-32
JCSG3199788|pdb|3R2T_A|Putative uncharacterized protein           133	1e-31
JCSG1660473|pdb|2QEJ_D|SUPERANTIGEN-LIKE MOLECULE 7               121	4e-28
JCSG3299901|pdb|4RCO_A|Putative uncharacterized protein           120	9e-28
JCSG3255223|pdb|4DXF_A|Staphylococcal enterotoxin-like toxin      117	8e-27
JCSG3229830|pdb|3URY_A|Exotoxin                                   117	8e-27
JCSG450851|pdb|1V1O_A|EXOTOXIN 1                                  108	2e-24
JCSG450852|pdb|1V1P_A|EXOTOXIN 1                                  107	6e-24
JCSG3229720|pdb|4RFB_A|Putative uncharacterized protein           107	8e-24
JCSG3154853|pdb|3KM9_X|Staphylococcal enterotoxin-like toxin      82	2e-16
JCSG1013490|pdb|2AQ3_H|Enterotoxin type C-3                       46	2e-05
JCSG2887595|pdb|3BVG_A|Enterotoxin type C-3                       45	5e-05
...more
PDB sequence alignments
QUERY       1   MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQAT------------QD------ 42
JCSG3184579 2   ------------------------------STLEVRSQAT------------QD------ 13
JCSG1668076 1   ------------------------------STLEVRSQAT------------QD------ 12
JCSG1666960 20  -----------------------------------------------------D------ 20
JCSG277013  16  -----------------------------------------------------D------ 16
JCSG1666975 20  -----------------------------------------------------D------ 20
JCSG3154774 1   MKLKTLAKATLALGLLTTGVITSeGQaVQAAekQgRvQhlhdi---------RD------ 45
JCSG3302485 10  ------------------------SQsVQAKA-EVKQQSe------------SE------ 26
JCSG3300529 18  ---------------------------------EVKQQSe------------SE------ 26
JCSG3199786 18  MKLtTIAKATLALGILTTGVFTAeSQtghA---KVElDeT------------Qrkyyinm 62
JCSG3199788 18  MKFtvIAKAiFiLGILTTSVMiTenQsVNAKgkyeKmNrl------------yDtnk--- 62
JCSG1660473 14  ----------------------------------------------------KD------ 15
JCSG3299901 71  ---------------VTTppsTNTpQPMQSTksDTpQSpTtkqvpteinpkfKD------ 109
JCSG3255223 17  ----------------------------------------------------KD------ 18
JCSG3229830 6   ----------------------------------------------------KD------ 7
JCSG450851  26  ----------------------------------------------------RD------ 27
JCSG450852  26  ----------------------------------------------------RD------ 27
JCSG3229720 28  ----------------------------------------------------KS------ 29
JCSG3154853     ------------------------------------------------------------
JCSG1013490     ------------------------------------------------------------
JCSG2887595     ------------------------------------------------------------

QUERY       43  LSEYYKGRGFELTNVT----G----YKY---G----NK----VT-----FIDNSQQ---- 74
JCSG3184579 14  LSEYYKGRGFELTNVT----G----YKY---G----NK----VT-----FIDNSQQ---- 45
JCSG1668076 13  LSEYYNrpyFDLrNLS----G----YRe---G----Nt----VT-----FINHyQQ---- 44
JCSG1666960 21  LrDYYSGaSkELkNVT----G----YRYsk-G----GK----hy-----LIfDAHQaftr 58
JCSG277013  17  LrDYYSGaSkELkNVT----G----YRYskgG----Kh----yl-----IFDKhQK---- 51
JCSG1666975 21  LrDYYSGaSkELkNVT----G----YRYskgG----Kh----yl-----IFDKhQK---- 55
JCSG3154774 46  LhRYYSSESFEySNVS----GkvenYNg---S----Nv----Vr-----FnpKDQN---- 81
JCSG3302485 27  LKHYYNkpiLErkNVT----G----FKY---t----DEgkhyLe-----vtvGQQH---- 62
JCSG3300529 27  LKHYYNkpiLErkNVT----G----FKY---t----DEgkhyLe-----vtvGQQH---- 62
JCSG3199786 63  LhQYYSeESFEpTNISvksed----Yyg---S----Nv----LN-----FkQRNKa---- 98
JCSG3199788 63  LhQYYSGpSYELTNVS----G----qSq---GyydsNv----Ll-----FnQQNQK---- 98
JCSG1660473 16  LhRYYSSESFEFSNIS----GkvenYNg---S----Nv----Vr-----FnQEKQN---- 51
JCSG3299901 110 LraYYtkpSLEFkNei----G----iil--------KK----wT-----tIrfmNv---- 140
JCSG3255223 19  LraYYtkpSLEFkNei----G----iil--------KK----wT-----tIrfmNv---- 49
JCSG3229830 8   LraYYtkpSLEFkNei----G----iil--------KK----wT-----tIrfmNv---- 38
JCSG450851  28  LhRYYSSESFEySNVS----GkvenYNg---S----Nv----Vr-----FnpKDQN---- 63
JCSG450852  28  LhRYYSSESFEySNVS----GkvenYNg---S----Nv----Vr-----F--NpQN---- 61
JCSG3229720 30  LKyYYSkpSIELkNLd----G----l-Y---r----QK----VTdkgvyvwkDrKD---- 65
JCSG3154853     ------------------------------------------------------------
JCSG1013490     ------------------------------------------------------------
JCSG2887595     ------------------------------------------------------------

QUERY       75  ID-VTLTGNEKLTVKDDDEV-----S-----NV---D--------VFVVR--------EG 104
JCSG3184579 46  ID-VTLTGNEKLTVKDDDEV-----S-----NV---D--------VFVVR--------EG 75
JCSG1668076 45  tD-VkLeGKDKdkIKDgNN------E-----NL---D--------VFVVR--------EG 73
JCSG1666960 59  IQ-IfgkdiERLkARkNp-------------GL---D--------IFVVK--------EA 85
JCSG277013  52  FtrIqIfGKDierLKtrkN------p-----GL---D--------IFVVK--------EA 81
JCSG1666975 56  FtrIqIfGKDierLKtrkN------p-----GL---D--------IFVVK--------EA 85
JCSG3154774 82  hQ-LfLlGKDKeqyKEglQg-----Q-----NV-------------FVVQ--------El 109
JCSG3302485 63  sr-ITLlGSDKdkfKDgEN------S-----NI---D--------VFILR--------EG 91
JCSG3300529 63  sr-ITLlGSDKdkfKDgEN------S-----NI---D--------VFILR--------EG 91
JCSG3199786 99  Fk-VfLlGDDKnkyKE--KT-----h-----GL---D--------VFAVp--------El 126
JCSG3199788 99  FQ-VfLlGKDEnkyKE--KT-----h-----GL---D--------VFAVp--------El 126
JCSG1660473 52  hQ-LfLlGEDKakyKQg--L-----Q-----Gq---D--------VFVVK--------El 79
JCSG3299901 141 Vp-dyFiyKiaLVgKDDkKy-----GegvhrNV---D--------VFVVl--------Ee 175
JCSG3255223 50  Vp-dyFiyKiaLVgKDDkKy-----GegvhrNV---D--------VFVVl--------Ee 84
JCSG3229830 39  Vp-dyFiyKiaLVgKDDkKy-----GegvhrNV---D--------VFVVl--------Ee 73
JCSG450851  64  hQ-LfLlGKDKeqyKEglQg-----Q-----NV-------------FVVQ--------El 91
JCSG450852  62  hQ-LfLlGKDKeqyKEglQg-----Q-----NV-------------FVVQ--------El 89
JCSG3229720 66  yf-VgLlGKD-IekypQgEh-----D-----Kq---D--------AFLVi--------Ee 94
JCSG3154853     ------------------------------------------------------------
JCSG1013490 70  --------NEdLAkKykDEV-----v-----DV---ygsnyyvncyFssK--------DG 100
JCSG2887595 70  --------NEdLAkKykDEV-----v-----DV---ygsnyyvncyFssK--------DA 100

QUERY       105 SDKSAI-------T-----TSIGGITKTNGTQHKD-TVQNVNLSVSKSTGQHTTSVTSEY 151
JCSG3184579 76  SDKSAI-------T-----TSIGGITKTNGTQHKD-TVQNVNLSVSKSTGQHTTSVTSEY 122
JCSG1668076 74  SgRQAd-------N-----NSIGGITKTNrTQHiD-TVQNVNLlVSKSTGQHTTSVTStn 120
JCSG1666960 86  ENRNGt-------V-----fSyGGVTKkNqgaYyD-yLNapKFvIKKEVdagVyThVKRH 132
JCSG277013  82  ENRNGt-------V-----fSyGGVTKkNqgaYyD-yLNapKFvIKKEVdagVyThVKRH 128
JCSG1666975 86  ENRNGt-------V-----fSyGGVTKkNqgaYyD-yLNapKFvIKKEVdagVyThVKRH 132
JCSG3154774 110 iDpNGr-------l-----STVGGVTKkN---NKt-SetNTpLfVNKvNGEdldA-SiDs 152
JCSG3302485 92  DSRQAt-------N-----ySIGGVTKSNSVQYiD-yINTpiLEIKKDN----eDVlKDF 134
JCSG3300529 92  DSRQAt-------N-----ySIGGVTKSNSVQYiD-yINTpiLEIKKDN----eDVlKDF 134
JCSG3199786 127 iDiKGg-------i-----ySVGGITKkNvrSvfg-fVSNpSLQVKKvdAKNgfSI-NEl 172
JCSG3199788 127 vDlDGr-------i-----fSVSGVTKkNvkSifE-SLRTpNLlVKKiddKdgfSI-DEF 172
JCSG1660473 80  iDpNGr-------l-----STVGGVTKkNN-QsSE-T--NIHLlVNKldGgNldA-TNDs 122
JCSG3299901 176 NNyNle-------k-----ySVGGITKSNS---Kk-VdHKAGVrITKEdNKgTiShdvSe 219
JCSG3255223 85  NNyNle-------k-----ySVGGITKSNS---Kk-VdHKAGVrITKEdNKgTiShdvSe 128
JCSG3229830 74  NNyNle-------k-----ySVGGITKSNS---Kk-VdHKAGVrITKEdNKgTiShdvSe 117
JCSG450851  92  iDpNGr-------l-----STVGGVTKkN---NKt-SetNTpLfVNKvNGEdldA-SiDs 134
JCSG450852  90  iDpNGr-------l-----STVGGVTKkN---NKt-SetNTpLfVNKvNGEdldA-SiDs 132
JCSG3229720 95  EtvNGr-------q-----ySIGGLSKTNS---KE-fsKEVDVKVTRKidEsSeKskDSk 138
JCSG3154853 5   ---------------------------------------NTHLfVNKvyGgNldA-SiDs 24
JCSG1013490 101 KvtGGk-------T-----cmyGGITKhEGNHfdNgNLQNVlVrVy----ENkrNTiSfe 144
JCSG2887595 101 StwhGk-------T-----cmyGGITKhEGNHfdNgNLQNVlVrVy----ENkrNTiSfe 144

QUERY       152 YSIYKEEISLKELDFKLRKHLIDKHDLY-K--TEP---KDS-KI-RITMKNGGYY----- 198
JCSG3184579 123 YSIYKEEISLKELDFKLRKHLIDKHDLY-K--TEP---KDS-KI-RITMKNGGYY----- 169
JCSG1668076 121 YSIYKEEISLKELDFKLRKHLIDKHDLY-K--TEP---KDS-KI-RVTMKNGdFY----- 167
JCSG1666960 133 Y-IYKEEVSLKELDFKLRQYLIQNfDLY-K--kfP---KDS-KI-KViMKDGGYY----- 178
JCSG277013  129 Y-IYKEEVSLKELDFKLRQYLIQNfDLY-K--kfP---KDS-KI-KViMKDGGYY----- 174
JCSG1666975 133 Y-IYKEEVSLKELDFKLRQYLIQNfDLY-K--kfP---KDS-KI-KViMKDGGYY----- 178
JCSG3154774 153 FlIqKEEISLKELDFKIRQQLVNNYgLY-K--gts---KyG-KI-iINLKDeNkv----- 199
JCSG3302485 135 YyIsKEDISLKELDYRLRERaIkQHgLY-S--Ngl---KQG-QI-tITMNDGttH----- 181
JCSG3300529 135 YyIsKEDISLKELDYRLRERaIkQHgLY-S--Ngl---KQG-QI-tITMNDGttH----- 181
JCSG3199786 173 FfIqKEEVSLKELDFKIRKlLIEKYrLY-K--gts---dkG-RI-vINMKDekkH----- 219
JCSG3199788 173 FfIqKEEVSLKELDFKIRKlLIkKYkLY-E--gSa---dkG-RI-vINMKDeNkY----- 219
JCSG1660473 123 FlInKEEVSLKELDFKIRKQLVEKYgLY-Q--gts---KyG-KI-tIiLNGGkkq----- 169
JCSG3299901 220 FKItKEQISLKELDFKLRKQLIEKNNLY-g--Nvg---S-G-KI-vIkMKNGGkY----- 265
JCSG3255223 129 FKItKEQISLKELDFKLRKQLIEKNNLY-g--Nvg---S-G-KI-vIkMKNGGkY----- 174
JCSG3229830 118 FKItKEQISLKELDFKLRKQLIEKNNLY-g--Nvg---S-G-KI-vIkMKNGGkY----- 163
JCSG450851  135 FlIqKEEISLKELDFKIRQQLVNNYgLY-K--gts---KyG-KI-iINLKDeNkv----- 181
JCSG450852  133 FlIqKEEISLKELDFKIRQQLVNNYgLY-K--gts---KyG-KI-iINLKDeNkv----- 179
JCSG3229720 139 FKItKEEISLKELDFKLRKkLMEEEkLYga--VNn---RkG-KI-vVkMEDdkFY----- 186
JCSG3154853 25  FSInKEEVSLKELDFKIRQHLVkNYgLY-K--gtt---KyG-KI-tINLKDGekq----- 71
JCSG1013490 145 vQtdKKSVTaQELDIKaRNfLINKkNLY-EfnSSP---yETgyI-KFieNNGNtFwydmm 199
JCSG2887595 145 vQtdKKSVTaQELDIKaRNfLINKkNLY-EfnSSP---yETgyI-KFieNNGNtFwydmm 199

QUERY       199 -----TFEL--------NKKLQPHRMGDTIDSRNIEKIEVNL 227
JCSG3184579 170 -----TFEL--------NKKLQPHRMGDTIDSRNIEKIEVNL 198
JCSG1668076 168 -----TFEL--------NKKLQtHRMGDVIDGRNIEKIEVNL 196
JCSG1666960 179 -----TFEL--------NKKLQPHRMSDVIDGRNIEKMEANI 207
JCSG277013  175 -----TFEL--------NKKLQPHRMSDVIDGRNIEKMEANI 203
JCSG1666975 179 -----TFEL--------NKKLQPHRMSDVIDGRNIEKMEANI 207
JCSG3154774 200 -----eIDL--------GdKLQfERMGDVLNSKDIRgISVTI 228
JCSG3302485 182 -----TIDL--------SQKLEkERMGESIDGtKINKIlVEM 210
JCSG3300529 182 -----TIDL--------SQKLEkERMGESIDGtKINKIlVEM 210
JCSG3199786 220 -----eIDL--------SEKLSfERMfDVMDSKQIKNIEVNL 248
JCSG3199788 220 -----eIDL--------SdKLDfERMADVINSEQIKNIEVNL 248
JCSG1660473 170 -----eIDL--------GdKLQfERMGDVLNSKDINKIEVTL 198
JCSG3299901 266 -----TFEL--------HKKLQeNRMADVIDGtNIDNIEVNI 294
JCSG3255223 175 -----TFEL--------HKKLQeNRMADVIDGtNIDNIEVNI 203
JCSG3229830 164 -----TFEL--------HKKLQeNRMADVIDGtNIDNIEVNI 192
JCSG450851  182 -----eIDL--------GdKLQfERMGDVLNSKDIRgISVTI 210
JCSG450852  180 -----eIDL--------GdKLQfERMGDVLNSKDIRgISVTI 208
JCSG3229720 187 -----TFEL--------TKKLQPHRMGDTIDGtKIKEINVEL 215
JCSG3154853 72  -----eIDL--------GdKLQfERMGDVLNSKDINKIEVTL 100
JCSG1013490 200 papgdkFDq--------SKyLMmYNdNkTVDSKSV-KIEVHL 232
JCSG2887595 200 papgdkFDq--------SKyLMmYNdNkTVDSKSV-KIEVHL 232

Note
Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages.



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