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2635576;2635576 |
Protein Sequence Comparative Analysis (PSCA) | |
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2635576 PDB Fold Similairty  PDB sequences with significant alignments Sequence information Score E-value JCSG1578809|pdb|2Q83_A|YtaA protein 704 0.0PDB sequence alignments QUERY 13 EEGNSSELPLSAEDAKKLTELAENVLQGWDVQAEKIDVIQGNQMALVWKVHTDSGAVCLK 72 JCSG1578809 2 EEGNSSELPLSAEDAKKLTELAENVLQGWDVQAEKIDVIQGNQMALVWKVHTDSGAVCLK 61 QUERY 73 RIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELT 132 JCSG1578809 62 RIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELT 121 QUERY 133 VKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKE 192 JCSG1578809 122 VKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKE 181 QUERY 193 DPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQ 252 JCSG1578809 182 DPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQ 241 QUERY 253 IWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFI 312 JCSG1578809 242 IWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFI 301 QUERY 313 DMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI 357 JCSG1578809 302 DMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI 346 Note Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages. |
