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10174951;10174951 |
Protein Sequence Comparative Analysis (PSCA) | |
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10174951 PDB Fold Similairty  PDB sequences with significant alignments Sequence information Score E-value JCSG453511|pdb|1VL5_A|Unknown Conserved Protein Bh2331 494 e-140 JCSG469602|pdb|1XXL_A|Ycgj Protein 139 2e-33 JCSG2392712|pdb|3DH0_B|SAM dependent methyltransferase 51 7e-07 JCSG977886|pdb|2YQZ_A|Hypothetical protein TTHA0223 50 1e-06 JCSG3165007|pdb|3MGG_B|Methyltransferase 49 2e-06 JCSG486379|pdb|1VE3_B|Hypothetical Protein pH0226 47 1e-05 JCSG453596|pdb|1VLM_B|Sam-Dependent Methyltransferase 46 2e-05 JCSG3210595|pdb|3SM3_A|SAM-dependent methyltransferases 45 5e-05 JCSG2862360|pdb|3L8D_A|Methyltransferase 45 5e-05 JCSG1675379|pdb|3BUS_A|Methyltransferase 42 3e-04 JCSG2877030|pdb|3DLC_A|Putative S-adenosyl-L-methionine-dep... 42 3e-04 JCSG1479451|pdb|2H1R_B|Dimethyladenosine transferase, putative 42 3e-04PDB sequence alignments QUERY 19 YVTSQIHAKGSDLAKLMQIAALKGNEEV-LDVATGGGHVANAFAPFVK---KVVAFDLTE 74 JCSG453511 14 YVTSQIHAKGSDLAKLxQIAALKGNEEV-LDVATGGGHVANAFAPFVK---KVVAFDLTE 69 JCSG469602 4 ------HhhhhSLGlxIKtAecRAEHRV-LDIGAGAGHTAlAFSPYVQ---EcIGvDaTK 53 JCSG2392712 25 -----------DpeKVLKefGLKeGmtV-LDVGTGAGfylpyLSkMVgekgKVyAIDVqE 72 JCSG977886 37 ----------------------KGEEpVfLELGVGtGRIAlpLiargy---RyIALDada 71 JCSG3165007 63 ---------------------------------------------------EITSIDISp 71 JCSG486379 37 ----------------------KkRgKV-LDLAcGvGgfSflLedYgf---EVVGvDISE 70 JCSG453596 36 ------------LSELQaVkCLlpEgRg-VEIGVGtGR----FAvpLK---ikIGvEpSE 75 JCSG3210595 28 ---------------------LQeDDEI-LDIGcGSGkISleLAskgy---SVTGIDINS 62 JCSG2862360 51 ---------------------VKkEaEV-LDVGcGdGYgTykLSrtgy---KAVGvDISE 85 JCSG1675379 52 --------------EMIaLldVRSGDRV-LDVGcGiGkpAvrLAtardv--RVTGISISR 94 JCSG2877030 48 -----------------------------IDIGSGpGaLSiALAkqsdf--SIrALDFSK 76 JCSG1479451 31 ------------LdKIIyaAkIKSSDiV-LEIGcGtGNLTvkLlPLAK---KVITIDIdS 74 QUERY 75 DILKVA-RAFIEGNG-HQQ-----VEYVQGDAEQLPFTDERF-HIVTCRIAAHHFPNP-- 124 JCSG453511 70 DILKVA-RAFIEGNG-HQQ-----VEYVQGDAEQxPFTDERF-HIVTCRIAAHHFPNP-- 119 JCSG469602 54 ExVEVA-sSFaQeKG-vEN-----VRFqQGtAESLPFpDDsF-dIITCRyAAHHFsDv-- 103 JCSG2392712 73 EMVNyA-wekVNklG-lKN-----VEvLKSEeNKIPLpDNtv-dFIfmaFTfHELsEP-- 122 JCSG977886 72 aMLEVf-RqkIaGvd--RK-----VQvVQADARaIPLpDEsv-HgVivvhlwHlvPDw-- 120 JCSG3165007 72 EsLEkA-RentEkNG-iKN-----VKFLQANifSLPFeDSsFdHIfVCfVl-EHLqSP-- 121 JCSG486379 71 DxIRkA-ReYaKSR--ESN-----VEFIvGDARKLsFeDKtFdYVIfidsiVHfePle-- 120 JCSG453596 76 rxaEIA-Rk--------Rg-----VfvLKGtAENLPLkDEsF-dFAlxvtTicfvdDP-- 118 JCSG3210595 63 EaIRLA-ETaaRSpG-lNQktggkAEFkveNASSLsFhDSsF-dFAVmQafltsvPDPke 119 JCSG2862360 86 vMIQkG-KergEG----pD-----LSFIKGDlSSLPFeNEQF-EaImAinSlEwteEP-- 132 JCSG1675379 95 pqVNqA-NAratAaGlaNR-----VtFsyADAmDLPFeDasF-daVwAleSlHHMPDr-- 145 JCSG2877030 77 hMnEIAlKnIaDANl-NDR-----IQiVQGDVHNIPIeDNya-dLIVsRgSVffWeDv-- 127 JCSG1479451 75 rMISeV-KkrclyEG-YNN-----LEvyEGDAiKtvF--pKF-dVcTANI-pYkIsSP-- 121 QUERY 125 -ASFV-SEAYRVLKKGGQ---LL--LVDNS------APENDAFDVFYNYVEKERDYSHHR 171 JCSG453511 120 -ASFV-SEAYRVLKKGGQ---LL--LVDNS------APENDAFDVFYNYVEKERDYSHHR 166 JCSG469602 104 -rKaV-rEVaRVLKQdGR---FL--LVDHy------APEDpVLDeFvNHLNRlRDpSHvR 150 JCSG2392712 123 -lKFL-EElkRVaKpfAy---La--IIDwK------keERD------------------- 150 JCSG977886 121 -pKvL-AEAiRVLKpGGa---LL------------------------------------- 138 JCSG3165007 122 -eEaL-KSlkKVLKpGGt---It--VIEGDhgscyfhPEGkkaieaWNcLiRvQaYmkgN 174 JCSG486379 121 -lNqVfKEVrRVLKpSGK---FI------------------------------------- 139 JCSG453596 119 -eraL-KEAYRILKKGGy---LIvgIVDR---------ESflgreYeKnkEKSvfYKNaR 164 JCSG3210595 120 rSrII-KEVFRVLKpGAy---Ly--LVE-------------------------------- 141 JCSG2862360 133 -lraL-NEikRVLKSdGyaciaI--LgpTA------kPRENSYprLY------------- 169 JCSG1675379 146 -GraL-rEmaRVLRpGGt---Va--IAD-------------------------------- 166 JCSG2877030 128 -ATaf-rEiYRILKSGGK------------------------------------------ 143 JCSG1479451 122 -liFk-liSHRpLfKcAv---LM------------------------------------- 139 QUERY 172 AWKKSDWLKMLEEAGFELEELHCFHKTFIFEDWCDRMNVTTEKKQELSDFIKSKPTEYYQ 231 JCSG453511 167 AWKKSDWLKxLEEAGFELEELHCFHKTFIFEDWCDRxNVTTEKKQELSDFIKSKPTEYYQ 226 JCSG469602 151 esSlSEWqaxFSanqLayQDIQkWNlpIqYDSWikRgGTpADREKQIithLNhasdEarD 210 JCSG2392712 149 ------------------------------------------------------------ 150 JCSG977886 137 ------------------------------------------------------------ 138 JCSG3165007 175 SlvgrQiypLLQESGFE------------------------------------------- 191 JCSG486379 138 ------------------------------------------------------------ 139 JCSG453596 165 fFStEElxdLxRKAGFE------------------------------------------- 181 JCSG3210595 140 ------------------------------------------------------------ 141 JCSG2862360 168 ------------------------------------------------------------ 169 JCSG1675379 165 ------------------------------------------------------------ 166 JCSG2877030 142 ------------------------------------------------------------ 143 JCSG1479451 138 ------------------------------------------------------------ 139 QUERY 232 KFKIVV-EDGRVYSFRGESILMKARKPTVKNKGSS 265 JCSG453511 227 KFKIVV-EDGRVYSFRGESILxKARKPTVKNKGSS 260 JCSG469602 211 tFcITLnQNGQpiSFclKAILIQGiK--------- 236 JCSG2392712 149 ----------------------------------- 150 JCSG977886 137 ----------------------------------- 138 JCSG3165007 190 ----------------------------------- 191 JCSG486379 138 ----------------------------------- 139 JCSG453596 180 ----------------------------------- 181 JCSG3210595 140 ----------------------------------- 141 JCSG2862360 168 ----------------------------------- 169 JCSG1675379 165 ----------------------------------- 166 JCSG2877030 142 ----------------------------------- 143 JCSG1479451 138 ----------------------------------- 139 Note Homologous search is done using BLAST from NCBI BLAST against database pdbnr with expect (E-value cut-off) at 0.001. The structure of a PDB sequence may be fully or partly solved. The non-redundant database pdbnr consists of unique PDB sequences from the representative PDB chains. Each representative chain has the best structural coverage in the set of the same sequences. You could click a sequence ID to see all of PDB chains associated with the sequence ID plus sequence alignments and structural coverages. |
