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   TM0010;TM0010
 Protein Sequence Comparative Analysis   (PSCA)
 
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 FFAS03 results for 281891
current user: public


Query: TM0010 TM0010 281891 Purified-2005-03-03, from JCSG0113

Results of FFAS03 search in PDB0113
Master-slave alignment does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVIYPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVTRNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELAARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYPLAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQPKVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVKNTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKLGAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEEDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALISYVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPALPVEEAVELast
1 -108.0002fug_1 mol:protein length:438 NADH-quinone oxidoreductase chain 1  ali model follow..  45  1......................................................................................................MTGPILSGLDPRFERTLYAHVGKEGSWTLDYYLRHGGYETAKRVLEKTPDEVIEEVKRSGLRGRGGAGFPTGLKWSFMPKDDGKQHYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATVGYIYVRGEYRRAADRLEQAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALMNSLEGLRANPRLKPPFPAQSGLWGKPTTINNVETLASVVPIMERGADWFAQMGTEQSKGMKLYQISGPVKRPGVYELPMGTTFRELIYEWAGGP--LEPIQAIIPGGSSTPPLPEEVLDTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWPVKGSLRHFKDQYLALAREKRPVPRPSL....................................................................... 436
2 -23.6002vkr_A mol:protein length:103 ZINC-CONTAINING FERREDOXIN  ali model follow..  25  37...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IVGVDFDLCIADGSCITACPVNVFQASEKKADPINEQACIFCMACVNVCPVAAIDVKPP......... 103
3 -23.4001f37_A mol:protein length:110 FERREDOXIN [2FE-2S]  ali model follow..  29  1..AEFKHVFVCVQDSCAQRGSREVFQAFMEKIQTDPLFMTTVITPTGCMNACMMGPVVVVYPDGVWYGQVKPEDVDEIVEKHLKGGEPVERLVISKGKPPGMF........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 110
4 -23.2001xer_A mol:protein length:103 FERREDOXIN  ali model follow..  23  37...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IVGVDFDLCIADGSCINACPVNVFQASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP......... 103
5 -22.1001jb0_C mol:protein length:80 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  26  4.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VKIYDTCIGCTQCVRACPTDVLEKAGQIASSPRTEDCVGCKRCETACPTDFLSIRV.......... 66
6 -22.0001k0t_A mol:protein length:80 PSAC SUBUNIT OF PHOTOSYSTEM I  ali model follow..  26  4.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VKIYDTCIGCTQCVRACPLDVLEKAGQIASSPRTEDCVGCKRCETACPTDFLSIRV.......... 66
7 -21.5002wsc_C mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSHSVKIYDTCIGCTQCVRACPTDVLEKAKQIASAPRTEDCVGCKRCESACPTDFLS............. 64
8 -19.6001clf_A mol:protein length:55 FERREDOXIN  ali model follow..  44  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KIADSCVSCGACASECPVNAIS-QGDSIFVIDADTCIDCGNCANVCPVGAPVQ............ 54
9 -19.5001fdn_A mol:protein length:55 FERREDOXIN  ali model follow..  38  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VINEACISCGACEPECPVNAIS-SGDDRYVIDADTCIDCGACAGVCPVDAPVQ............ 54
10 -19.4001fca_A mol:protein length:55 FERREDOXIN  ali model follow..  40  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VINEACISCGACEPECPVDAIS-QGGSRYVIDADTCIDCGACAGVCPVDAPVQ............ 54
11 -19.1001jnr_B mol:protein length:150 adenylylsulfate reductase  ali model follow..  33  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MPSFVNPEKCDGCTACEYICPNDLMDKEKMKAYNREPDMCWECYSCVKMCPQGAID............. 63
12 -18.6001bqx_A mol:protein length:77 PROTEIN (FERREDOXIN)  ali model follow..  37  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YVITEPCIGTASCVEVCPVDCIH-EGEDQYYIDPDVCIDCGACEAVCPVSAIYH............ 56
13 -18.5001dur_A mol:protein length:55 2[4FE-4S] FERREDOXIN  ali model follow..  39  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YVINDSCIACGACKPECPVNCIQ--EGSIYAIDADSCIDCGSCASVCPVGAPN............. 52
14 -18.5003gyx_B mol:protein length:166 Adenylylsulfate Reductase  ali model follow..  37  3.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YVDPSKCDGCTACMYICPNDLMDPEEMKAFNQEPEACWECYSCIKICPQGAIT............. 62
15 -17.9002v2k_A mol:protein length:105 FERREDOXIN  ali model follow..  37  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YVIAEPCVDVKACIEECPVDCIY-EGARMLYIHPDECVDCGACEPVCPVEAIYYED.......... 58
16 -17.5002fgo_A mol:protein length:82 Ferredoxin  ali model follow..  26  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KITDDCINCDVCEPECPNGAIS-QGEEIYVIDPNLCTECPQCQQVCPVDCIPLDDANVESKDQ.. 70
17 -17.5001ff2_A mol:protein length:106 FERREDOXIN I  ali model follow..  30  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDDALCEPECPAQAIFSED.......... 58
18 -17.5001pc4_A mol:protein length:107 Ferredoxin I  ali model follow..  32  4..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECAAQAIFSED.......... 59
19 -17.5001h98_A mol:protein length:78 FERREDOXIN  ali model follow..  37  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VICEPCIGVQSCVEVCPVECIY-DGGDQFYIHPEECIDCGACVPACPVNAI.............. 54
20 -17.4001bc6_A mol:protein length:77 7-FE FERREDOXIN  ali model follow..  39  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VITEPCIGTASCVEVCPVDCIH-EGEDQYYIDPDVCIDCGACEAVCPVSAI.............. 54
21 -17.4001rgv_A mol:protein length:80 ferredoxin  ali model follow..  26  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YINDDCTACDACVEECPNEAIT-PGDPIYVIDPTKCSECVQCRLVCPADCIPDNPDYRETREE.. 70
22 -17.4001frk_A mol:protein length:106 FERREDOXIN  ali model follow..  33  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIDPDECIDCALCEPECPAQAIFSED.......... 58
23 -17.4001f5c_A mol:protein length:106 FERREDOXIN 1  ali model follow..  33  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCHY-EGPNFLVIHPDECIDCALCEPECPAQAIFS............ 56
24 -17.3001g6b_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  34  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCESECPAQAI.............. 54
25 -17.3001fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  30  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVAPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAIFSED.......... 58
26 -17.3001b0v_A mol:protein length:106 PROTEIN (FERREDOXIN)  ali model follow..  34  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECNDCALCEPECPAQAI.............. 54
27 -17.3001g3o_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  26  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEECPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQE.. 66
28 -17.2001ftc_A mol:protein length:106 FERREDOXIN  ali model follow..  33  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAIFS............ 56
29 -17.2001d3w_A mol:protein length:106 FERREDOXIN 1  ali model follow..  28  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTECVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQE.. 66
30 -17.1001f5b_A mol:protein length:106 FERREDOXIN 1  ali model follow..  34  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAI.............. 54
31 -17.1001fri_A mol:protein length:106 FERREDOXIN  ali model follow..  33  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVNCFY-EGPNFLVIHPDECIDCALCEPECPAQAIFS............ 56
32 -17.1001blu_A mol:protein length:82 FERREDOXIN  ali model follow..  30  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MITDECINCDVCEPECPNGAIS-QGDETYVIEPSLCTECSQCVEVCPVDCIIKDPSHEETEDE.. 70
33 -17.1003exy_A mol:protein length:82 Ferredoxin  ali model follow..  30  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MITDECINCDGCEPECPNGAIS-QGDETYVIEPSLCTECSQCVEVCPVDCIIKDPSHEETEDE.. 70
34 -17.1001a6l_A mol:protein length:106 FERREDOXIN  ali model follow..  32  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCCDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAI.............. 54
35 -17.1002zvs_A mol:protein length:85 Uncharacterized ferredoxin-like protein yfhL  ali model follow..  26  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LITKKCINCDMCEPECPNEAIS-MGDHIYEINSDKCTECPTCQKVCPIPNTIVKDPAHVETEE.. 70
36 -17.0003eun_A mol:protein length:82 Ferredoxin  ali model follow..  31  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MITDECINCDVCEPECPNGAIS-QGDETYVIEPSLCTECSQCVEVCPVDAIIKDPSHEETEDE.. 70
37 -16.9001frl_A mol:protein length:106 FERREDOXIN  ali model follow..  32  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDSCIDCALCEPECPAQAI.............. 54
38 -16.9001frm_A mol:protein length:106 FERREDOXIN  ali model follow..  35  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCALCAPECPAQAI.............. 54
39 -16.8002fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  32  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTDCVEVCPVDAFY-EGPNFLVIHPDECIDCALCEPECPAQAI.............. 54
40 -16.6001b0t_A mol:protein length:106 PROTEIN (FERREDOXIN I)  ali model follow..  34  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FVVTDNCIKCTKCVEVCPVDCFY-EGPNFLVIHPDECIDCALCEPECPAQAI.............. 54
41 -15.4002fug_9 mol:protein length:182 NADH-quinone oxidoreductase chain 9  ali model follow..  26  12..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ITLKYLFSKPVTVPYPDAPVALKP-HVLTRHPNGLEKCIGCSLCAAACPAYAIYVEPAEVYEINMLRCIFCGLCEEACPTGAIVLGY.......... 117
42 -15.2001gao_A mol:protein length:106 FERREDOXIN I  ali model follow..  34  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VVTDNCIKCTDCVEVCPVDCFY-EGPNFLVIHPDECIDCASCEPECPAQAIFSED.......... 58
43 -13.4002auv_A mol:protein length:85 potential NAD-reducing hydrogenase subunit  ali model follow..  29  3.PKGKYPISVCMGTACFVKGADKVVHAFKEQLKDVTPDGRFSIDTLRCVGGCALAPIVMVGEK--VYGNVTPGQVKKILAEY............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 85
44 -11.6001h0h_B mol:protein length:214 FORMATE DEHYDROGENASE (SMALL SUBUNIT)  ali model follow..  12  5...............................................................................................................................................................................................................................................................................................................................................................................................................................................................FVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKLVRMHEQEIDGRIDW-------LFFPDQCRHCIAPPC-KATATGCVLFTPKTKDLEDYESVISACPYDVPRKVAESNQM---AKCDMC-ACVTSCPTGAMN............. 162
45 -10.8001dwl_A mol:protein length:59 FERREDOXIN I  ali model follow..  32  1...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TIVIDHEECIGCESCVELCPVFAMIDGEEKAMVTAPDSTAECAQAIDACPVEAIS............. 57
46 -10.8001kqf_B mol:protein length:294 FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRO  ali model follow..  16  7.....................................................................................................................................................................................................................................................................................................................................................................................................................................DIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDN-------PADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGC-LKACPSAGAIIFQSENCIGCGYCIAGCPFNIPRLNKEDNRV---YKCTLC-ACVKTCPTGAIH............. 185
47 -10.4002vpw_B mol:protein length:195 NRFC PROTEIN  ali model follow..  17  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................................MPRYAMAIDLSLCVGCAACAVACKMENEVIREREVGEYPNLVVEFRPEQCLHCENPP-C---------------------------PVCPTGASYQTKDVLVDPKKCIACGACIAACPYDARYLHPAGY----VSKCTFC-ACVETCPTYCRT............. 141
48 -10.0001ti2_B mol:protein length:274 Pyrogallol hydroxytransferase small subunit  ali model follow..  14  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................................MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEWPGYTASMQRGHRWMN-------------IERRERGTYPRNDINYRPTPCMHCENAPCVAKGNGAVYQVLIDPEKAKGKKELLDTCPYGVMYWNEEENVA---QKCTMC-RCAHNCGSFVYEFLKTTPEAMAK.. 166
49 -9.9601za3_R mol:protein length:134 Tumor necrosis factor receptor superfamily me  ali model follow..  19  36...............................................................................................................................................................................................................................................................................................................................................................................................................................................................HHISEDGRDCISCKYGQDYSTH------------------WNDLLFCLRCTRCDSGEVELSPCTTT------------RNTVCQ---CEE--GTFREEDSPEMCRKCRTGCPRG--MVKVGDCTPWSDIECVHKES........................ 134
50 -9.7801rof_A mol:protein length:60 FERREDOXIN  ali model follow..  25  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPAKDAADSCPTGAIS............. 57
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.

                                                                                                                                                                                                   

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