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   TM0006;TM0006
 Protein Sequence Comparative Analysis   (PSCA)
 
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 TM0006    Target Constructs

Accession: TM0006
Local acc: TM0006
Description: TM0006 muconate cycloisomerase
Organism: THERMOTOGA MARITIMA
Residues: 345 aa
Constructs: 1
Construct alignments            CP: Chemical properties   Pir/Fasta: sequences in Pir and/or Fasta format
>TM0006|1:345 tid:281887 alias: stage:integration Full|1:345 CP Pir/Fasta
MSRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERV
EALLAIENAVREMITGIDVRNYARIFEITDRLFGFPSLKAAVQFATLDALSQELGTQVCY
LLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVT
RGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAA
DESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESSLGI
NQSVHFALGTGAFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVKDQ
CDS  cDNA 1035 bp
   1 atgtcgagga tcgtgaacgt gaagctttct ctcaagagat acgaatacga aaagccgttt    60
  61 cacataactg gaagcgtatc ttccgaaagc agaaatgtcg aggttgaaat cgttttggaa   120
 121 agtggtgtca aagggtacgg agaagcgtct ccctccttca gagtgaacgg tgaaagggtg   180
 181 gaagcacttc ttgcaataga aaacgctgtg agggagatga tcacaggcat cgatgtgcga   240
 241 aactatgcca ggatcttcga gatcacagac aggctcttcg ggtttccgag tttgaaagca   300
 301 gccgttcaat ttgccacact ggacgctctc tctcaagaac ttggaacaca ggtctgttat   360
 361 ctccttggag gaaaaagaga tgagatagaa acggacaaaa cagttgggat agacaccgtc   420
 421 gaaaaccgtg tgaaggaggc aaagaagata ttcgaagagg gtttcagagt gatcaagata   480
 481 aaagttggag agaatttgaa ggaagacatc gaagccgtgg aagagatagc gaaagtcacc   540
 541 cgtggagcga agtacatagt tgacgcgaac atgggataca cccagaagga ggcggtggag   600
 601 ttcgcgagag cagtatatca aaaaggaata gacatcgctg tgtacgaaca acctgtgagg   660
 661 agggaagaca tagaaggctt gaagttcgtg aggttccact ctccgtttcc cgtcgcggcg   720
 721 gacgaatccg cgaggacgaa gttcgatgtg atgaggcttg tgaaggaaga agcggttgat   780
 781 tacgtgaaca taaaactcat gaagtcggga atttccgacg ctcttgccat agtggaaata   840
 841 gcagaatcgt caggtttgaa gctcatgatc ggatgcatgg gagagtcctc gctcggaata   900
 901 aatcagagtg ttcattttgc gcttggaacg ggagcttttg agtttcatga cctcgacagt   960
 961 cacctgatgc tgaaggaaga agttttcaga ggaaaattca tccaggatgg tccgagaatg  1020
1021 agggtgaaag atcaa  1035

Residues: 345 aa
Molecule Weight: 38662.30 Dalton
Number of Met residues: 9
Percentage of Met residues: 2.61 %
Number of Cys residues: 2
Percentage of Cys residues: 0.58 %
Notes: A protein target may have more than one constructs. Every construct has its unique target id. It can be identified by alias if available, otherwise by local accession with start and end positions. This list of constructs is sorted by stage in desc order.

The start codon is a ATG/Methionine in most of sequences, but the GTG/V, TTG/L, CTG/I can be the start codons in some cases as expressing in E.coli. The start codon warning is labelled by RED color in sequence(sample: 10174951).
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